##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630672.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2020408 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06227455048683 33.0 31.0 34.0 30.0 34.0 2 32.23538661498073 33.0 31.0 34.0 30.0 34.0 3 32.34464177532459 34.0 31.0 34.0 30.0 34.0 4 35.915184952742216 37.0 35.0 37.0 35.0 37.0 5 35.88693026359032 37.0 35.0 37.0 35.0 37.0 6 35.921335690612985 37.0 35.0 37.0 35.0 37.0 7 35.8980354463059 37.0 35.0 37.0 35.0 37.0 8 35.88406698053066 37.0 35.0 37.0 35.0 37.0 9 37.64619126433869 39.0 37.0 39.0 35.0 39.0 10 37.54297844791745 39.0 37.0 39.0 35.0 39.0 11 37.649228274685115 39.0 37.0 39.0 35.0 39.0 12 37.57016305617479 39.0 37.0 39.0 35.0 39.0 13 37.62121017141092 39.0 37.0 39.0 35.0 39.0 14 38.91644261951051 40.0 38.0 41.0 36.0 41.0 15 38.89727470887068 40.0 38.0 41.0 36.0 41.0 16 38.87405266659012 40.0 38.0 41.0 35.0 41.0 17 38.853221230563335 40.0 38.0 41.0 35.0 41.0 18 38.84033125982475 40.0 38.0 41.0 35.0 41.0 19 38.85949273612062 40.0 38.0 41.0 35.0 41.0 20 38.83835888592799 40.0 38.0 41.0 35.0 41.0 21 38.76298302125115 40.0 38.0 41.0 35.0 41.0 22 38.71942894702456 40.0 38.0 41.0 35.0 41.0 23 38.69541696528622 40.0 38.0 41.0 34.0 41.0 24 38.64764196142561 40.0 38.0 41.0 34.0 41.0 25 38.607525806668754 40.0 38.0 41.0 34.0 41.0 26 38.441392035668045 40.0 38.0 41.0 34.0 41.0 27 38.340788593195036 40.0 38.0 41.0 34.0 41.0 28 38.24201151450598 40.0 38.0 41.0 34.0 41.0 29 38.15403819426571 40.0 38.0 41.0 33.0 41.0 30 38.088410360679624 40.0 38.0 41.0 33.0 41.0 31 38.05828080268936 40.0 38.0 41.0 33.0 41.0 32 37.97098506836243 40.0 37.0 41.0 33.0 41.0 33 37.94065456086098 40.0 37.0 41.0 33.0 41.0 34 37.88234554604813 40.0 37.0 41.0 33.0 41.0 35 37.83487246140383 40.0 37.0 41.0 33.0 41.0 36 37.79998346868553 40.0 37.0 41.0 33.0 41.0 37 37.63685404136194 40.0 37.0 41.0 33.0 41.0 38 37.53990085170916 40.0 37.0 41.0 32.0 41.0 39 37.49495992888565 40.0 37.0 41.0 32.0 41.0 40 37.40587544693943 40.0 36.0 41.0 32.0 41.0 41 37.299979014139716 40.0 36.0 41.0 32.0 41.0 42 37.220721260260305 39.0 36.0 41.0 31.0 41.0 43 36.35620330151138 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 3.0 13 6.0 14 3.0 15 3.0 16 7.0 17 19.0 18 37.0 19 98.0 20 228.0 21 455.0 22 891.0 23 1506.0 24 2449.0 25 3984.0 26 5982.0 27 9054.0 28 12971.0 29 18741.0 30 25425.0 31 34351.0 32 45553.0 33 60597.0 34 82224.0 35 111983.0 36 160703.0 37 245915.0 38 457900.0 39 739316.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.950528804083135 18.33169340054088 11.610080736168142 26.10769705920784 2 19.85475210947492 19.946812722974766 33.53149462880764 26.66694053874267 3 20.7109158150235 22.087865421241652 28.603678068984085 28.597540694750762 4 14.842546653943165 14.800970893007747 33.34697744218 37.00950501086909 5 15.424805286852953 35.81900289446488 33.60697443288682 15.149217385795344 6 36.765296910327024 33.54594715522805 14.851950695107128 14.836805239337798 7 30.483595392613772 29.259931657368217 20.533228931978094 19.72324401803992 8 28.00469014179314 32.28610260897799 19.28778741719494 20.421419832033926 9 26.92673954963552 13.229902079184006 19.04714295330448 40.79621541787599 10 17.639753950687187 25.593790957074013 32.302089478956724 24.46436561328207 11 37.45233635978475 20.53119963888482 20.593117825706493 21.423346175623934 12 22.585883643303728 24.488073696005955 27.740981029574225 25.185061631116092 13 30.73567319076147 18.90058839600714 24.223028220042682 26.140710193188703 14 23.582415036962832 20.172608700816866 23.82271303617883 32.42226322604147 15 26.780184992338178 26.82581933946015 21.185671408943143 25.208324259258525 16 26.71663347205119 25.25044446468238 22.75109779806851 25.281824265197923 17 24.95926565327399 25.292317195338764 24.15522013375516 25.59319701763208 18 24.838299986933333 24.006933253085517 25.632446515753255 25.5223202442279 19 25.375072757581634 24.36017873617606 25.094139401546617 25.170609104695686 20 25.817161682194882 23.758567576449906 25.050534347517928 25.37373639383728 21 26.37640516172971 24.235896907951265 24.51806763782365 24.869630292495376 22 26.230741513595273 23.928434256843172 24.540142387082213 25.30068184247934 23 25.208571734026 24.102310028469496 24.979459594299765 25.70965864320474 24 25.44896872314899 24.720403007709336 24.482332281400588 25.34829598774109 25 25.874724313109038 24.117356494331837 24.521334304754287 25.48658488780484 26 25.64244449635915 24.795734326928027 24.582906026901497 24.978915149811325 27 26.08507786546084 23.917693851934857 24.30162620619202 25.69560207641229 28 24.978172725508905 24.237480746463092 25.35468083674189 25.429665691286118 29 24.76940301166893 24.65026865860757 25.265342445684237 25.314985884039267 30 24.733073715803936 25.159076780531457 25.151603042553784 24.956246461110826 31 25.47262731091938 24.89190302156792 24.313801964751676 25.321667702761026 32 24.806375741929354 24.48446056440085 24.544596932896724 26.164566760773074 33 24.557366630898315 24.26747468828078 25.336169724134926 25.838988956685977 34 25.66541015478062 23.992975676200054 24.93144948941006 25.410164679609267 35 25.344534371275508 24.164376700151653 25.5558283277437 24.93526060082914 36 24.567612086271684 24.871016151193224 24.997426262418283 25.56394550011681 37 25.36418386781284 23.962041330265965 25.278854567988247 25.39492023393295 38 24.547269660385425 23.833552430994136 26.018655637871163 25.600522270749277 39 24.813552510186064 23.65893423506539 25.83740511817415 25.690108136574395 40 24.479164604376937 23.853102937624477 26.4227324382006 25.24500001979798 41 23.76841707219532 23.964021128405747 26.900556719236906 25.367005080162023 42 24.43155045911519 23.872851424068802 26.776423375872593 24.919174740943415 43 23.825187783853558 23.174873589888776 26.8933799509802 26.10655867527747 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 47.5 2 66.0 3 225.5 4 385.0 5 385.0 6 599.0 7 813.0 8 785.0 9 757.0 10 1059.0 11 1361.0 12 1361.0 13 2471.5 14 3582.0 15 5252.5 16 6923.0 17 7016.0 18 7109.0 19 7109.0 20 8942.5 21 10776.0 22 11247.5 23 11719.0 24 14316.5 25 16914.0 26 16914.0 27 20546.5 28 24179.0 29 29527.5 30 34876.0 31 40674.0 32 46472.0 33 46472.0 34 54178.5 35 61885.0 36 70403.0 37 78921.0 38 89164.5 39 99408.0 40 99408.0 41 105709.0 42 112010.0 43 115490.5 44 118971.0 45 123242.0 46 127513.0 47 127513.0 48 132951.5 49 138390.0 50 141820.5 51 145251.0 52 149745.0 53 154239.0 54 154239.0 55 151209.5 56 148180.0 57 143086.5 58 137993.0 59 132102.0 60 126211.0 61 126211.0 62 119240.0 63 112269.0 64 100299.0 65 88329.0 66 78307.5 67 68286.0 68 68286.0 69 58900.0 70 49514.0 71 42738.0 72 35962.0 73 28341.5 74 20721.0 75 20721.0 76 16422.5 77 12124.0 78 9867.0 79 7610.0 80 6109.5 81 4609.0 82 4609.0 83 3460.0 84 2311.0 85 1999.0 86 1687.0 87 1465.5 88 1244.0 89 1244.0 90 976.0 91 708.0 92 390.0 93 72.0 94 45.0 95 18.0 96 18.0 97 12.5 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2020408.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.88595274628202 #Duplication Level Percentage of deduplicated Percentage of total 1 84.46942025312238 48.8959286927808 2 9.337012317664819 10.809637076235976 3 2.52844307483578 4.390840090548239 4 1.123254935079071 2.6008272837606077 5 0.5889451620365088 1.7045825909898382 6 0.3665776518069101 1.2731817978202693 7 0.25443748411561495 1.0309849327679559 8 0.1841934809317636 0.8529772106711414 9 0.14263730431047544 0.7431026631455908 >10 0.8050366898598288 8.992222906695678 >50 0.10479384233394909 4.25195045449692 >100 0.08685513571995501 10.243758263507912 >500 0.0065085998154231295 2.578848678585632 >1k 0.0018840683676224843 1.631157357993534 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3234 0.16006667960134785 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2726 0.13492324322612065 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2063 0.10210808905923952 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.9494953494541695E-5 0.0 2 0.0 0.0 0.0 3.4646467446179186E-4 0.0 3 0.0 0.0 0.0 8.909091629017505E-4 0.0 4 0.0 0.0 0.0 0.001336363744352626 0.0 5 0.0 0.0 0.0 0.0014353536513417092 0.0 6 0.0 0.0 0.0 0.001484848604836251 0.0 7 0.0 0.0 0.0 0.0015838385118253342 0.0 8 0.0 0.0 0.0 0.0016828284188144178 0.0 9 4.9494953494541695E-5 0.0 0.0 0.0028212123491888766 0.0 10 4.9494953494541695E-5 0.0 0.0 0.004058586186552419 0.0 11 4.9494953494541695E-5 0.0 0.0 0.0047515155354760025 0.0 12 4.9494953494541695E-5 0.0 0.0 0.005196970116926878 0.0 13 4.9494953494541695E-5 0.0 0.0 0.0055929297448832115 0.0 14 4.9494953494541695E-5 0.0 0.0 0.00584040451235592 0.0 15 4.9494953494541695E-5 0.0 0.0 0.00613737423332317 0.0 16 4.9494953494541695E-5 0.0 0.0 0.006978788442730379 0.0 17 4.9494953494541695E-5 0.0 0.0 0.008216162280093921 0.0 18 4.9494953494541695E-5 0.0 0.0 0.008810101722028422 0.0 19 9.898990698908339E-5 0.0 0.0 0.009602020977941089 0.0 20 9.898990698908339E-5 0.0 0.0 0.01024545537337013 0.0 21 1.4848486048362508E-4 0.0 0.0 0.012373738373635423 0.0 22 1.4848486048362508E-4 0.0 0.0 0.01514545576932976 0.0 23 1.9797981397816678E-4 0.0 0.0 0.018857577281420387 0.0 24 1.9797981397816678E-4 0.0 0.0 0.02454949693329268 0.0 25 1.9797981397816678E-4 0.0 0.0 0.02687575974753614 0.0 26 1.9797981397816678E-4 0.0 0.0 0.03137980051553944 0.0 27 1.9797981397816678E-4 0.0 0.0 0.037616164655851686 0.0 28 1.9797981397816678E-4 0.0 0.0 0.05691919651872295 0.0 29 1.9797981397816678E-4 0.0 0.0 0.08844748189474601 0.0 30 1.9797981397816678E-4 0.0 0.0 0.13135960657451365 0.0 31 1.9797981397816678E-4 0.0 0.0 0.2891495183151126 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1960 0.0 17.744898 1 GACGGAC 395 0.0 15.92405 7 CGCAAGA 455 0.0 15.857143 2 CGAATTA 105 9.350029E-6 15.857142 15 AAGACGG 430 0.0 15.488372 5 TAATTCG 75 0.004105838 14.8 5 CTTATAC 875 0.0 14.588572 37 CGGACCA 445 0.0 14.550563 9 TCTTATA 1305 0.0 14.45977 37 CAAGACG 520 0.0 14.230769 4 TCTATAC 145 8.918814E-7 14.034483 3 CGTTATT 410 0.0 13.987805 2 ACGGACC 450 0.0 13.9777775 8 TTAACGG 200 9.840733E-10 13.875001 35 GCGCAAG 540 0.0 13.703703 1 ACCGGAC 95 0.0012456451 13.631579 3 GCGTTAT 435 0.0 13.609196 1 CTAGACT 165 2.5976624E-7 13.454545 4 TAGACTG 235 5.638867E-11 13.3829775 5 CTAGCGG 360 0.0 13.361111 29 >>END_MODULE