##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630649.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 831534 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.43057890597378 31.0 30.0 31.0 27.0 34.0 2 30.600665757503602 31.0 30.0 33.0 27.0 34.0 3 30.676044515317475 31.0 30.0 33.0 27.0 34.0 4 34.50249659063851 35.0 35.0 37.0 30.0 37.0 5 33.56493180074417 35.0 33.0 37.0 28.0 37.0 6 33.78796537483735 35.0 33.0 37.0 29.0 37.0 7 33.75811452087347 35.0 33.0 37.0 29.0 37.0 8 33.76863483633862 35.0 33.0 37.0 29.0 37.0 9 35.20331098908764 37.0 34.0 39.0 30.0 39.0 10 34.72411951886513 37.0 33.0 39.0 28.0 39.0 11 35.086844314243315 37.0 34.0 39.0 30.0 39.0 12 34.88085393982687 37.0 33.0 39.0 29.0 39.0 13 35.10070303799965 37.0 34.0 39.0 30.0 39.0 14 35.91854091354052 38.0 34.0 40.0 30.0 40.0 15 35.88891253995627 38.0 34.0 40.0 29.0 40.0 16 35.81610252857971 38.0 34.0 40.0 29.0 40.0 17 35.72906820406622 38.0 34.0 40.0 29.0 40.0 18 35.65425947706287 38.0 34.0 40.0 29.0 40.0 19 35.70273735048717 38.0 34.0 40.0 29.0 40.0 20 35.64201824579632 38.0 34.0 40.0 28.0 40.0 21 35.597637619147264 38.0 34.0 40.0 28.0 40.0 22 35.519116476295615 38.0 34.0 39.0 28.0 40.0 23 35.427950029704135 38.0 34.0 39.0 27.0 40.0 24 35.30468026562955 37.0 33.0 39.0 27.0 40.0 25 35.19309853836403 37.0 33.0 39.0 27.0 40.0 26 34.9351704199708 37.0 33.0 39.0 27.0 40.0 27 34.762614637525346 37.0 33.0 39.0 26.0 40.0 28 34.589516483992234 37.0 33.0 39.0 26.0 40.0 29 34.412695091241005 37.0 33.0 39.0 25.0 40.0 30 34.279402886712994 37.0 32.0 39.0 25.0 40.0 31 34.20569934602794 37.0 32.0 39.0 25.0 40.0 32 34.055241276965226 37.0 32.0 39.0 24.0 40.0 33 33.935655066419415 36.0 32.0 39.0 24.0 40.0 34 33.84829483821467 36.0 32.0 39.0 24.0 40.0 35 33.73977371941496 36.0 31.0 39.0 24.0 40.0 36 33.68151512746322 36.0 31.0 39.0 24.0 40.0 37 33.48051793432379 36.0 31.0 39.0 23.0 40.0 38 33.25751683034007 36.0 31.0 39.0 22.0 40.0 39 33.16555787255843 36.0 31.0 39.0 22.0 40.0 40 32.914788812002875 36.0 30.0 39.0 21.0 40.0 41 32.766634918115194 35.0 30.0 38.0 21.0 40.0 42 32.58764644620665 35.0 30.0 38.0 20.0 40.0 43 31.698934739890372 35.0 29.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 5.0 12 5.0 13 10.0 14 22.0 15 31.0 16 62.0 17 146.0 18 249.0 19 492.0 20 931.0 21 1569.0 22 2633.0 23 4093.0 24 6181.0 25 8889.0 26 12504.0 27 17328.0 28 22925.0 29 29615.0 30 38000.0 31 48311.0 32 60104.0 33 75202.0 34 92129.0 35 107886.0 36 113589.0 37 99756.0 38 65948.0 39 22916.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.15686430139959 20.46458713654523 12.074671630985625 24.303876931069563 2 20.155519798348596 21.69231805314034 33.72826607210288 24.42389607640818 3 22.038906406713377 24.548124310010174 28.241178352298284 25.171790930978165 4 15.951963479545034 15.958337241772435 33.563149552513785 34.526549726168746 5 14.396043938071083 38.30474761104176 33.50410205716182 13.795106393725332 6 35.427895912855035 34.74277660324172 15.313745439152218 14.515582044751026 7 29.238612011054265 30.552569107216303 21.87715715773498 18.33166172399445 8 27.964941902556 33.76241981686859 19.382731193192342 18.88990708738308 9 27.32936957478588 12.996101181671465 19.761068098237715 39.91346114530494 10 17.171396479278055 27.140441641592528 32.68669711641376 23.001464762715656 11 36.118787686372414 21.487636103875488 21.515897125072456 20.87767908467964 12 22.192718517823685 25.625290126441016 29.125567926266392 23.056423429468907 13 30.02955982557538 19.888302823456407 25.79581833094017 24.286319020028042 14 22.94253752702836 20.657844417666627 26.21335988666729 30.186258168637725 15 25.92870526039825 27.524430750877293 23.131705979551047 23.415158009173407 16 25.180209107504925 26.11775345325627 24.730437961646786 23.97159947759202 17 23.335786630492557 26.902808544208657 26.00098131886369 23.760423506435092 18 23.441735395065024 24.969393915342007 27.588408892480643 24.000461797112322 19 24.09678978851135 25.359035228866166 27.46718715049535 23.07698783212713 20 24.251082938280337 24.834462571584563 27.418241466975495 23.496213023159605 21 25.168303400702797 25.080513845495194 26.761503438223812 22.989679315578197 22 24.85418515659011 25.00799726770042 26.834741574006593 23.303076001702877 23 24.13322846690574 25.242744133132263 26.96353967486597 23.660487725096026 24 24.226910745682076 25.51489175427583 26.702215423542512 23.55598207649958 25 24.164616239384078 25.152669644295965 27.206103418501225 23.47661069781873 26 23.96486493637061 25.993404959989608 27.02751781646932 23.01421228717046 27 24.673314620929514 25.34664848340537 26.45219558069784 23.527841314967276 28 23.748517799632967 25.179006510858244 27.577104484001858 23.49537120550693 29 23.645936305671206 25.646215308093232 27.666938453508816 23.040909932726745 30 23.523993005697903 26.042951941832804 27.30146933258291 23.13158571988638 31 23.657601493143996 26.00747534075576 26.81742418229441 23.517498983805833 32 23.1243701400063 25.75793653656976 27.17615876199891 23.94153456142503 33 23.469274858273987 25.851258036352093 27.05866506961832 23.620802035755602 34 24.22282191708337 25.697926963900454 26.9446589075131 23.134592211503076 35 24.01489295687248 25.752404591995038 27.230997169087495 23.00170528204499 36 23.557304932810926 26.203859373158522 26.232721692678833 24.00611400135172 37 23.77497492585992 25.14581484340989 27.25420728436841 23.825002946361785 38 23.53469611585335 25.106008894404795 27.39370849538323 23.965586494358618 39 23.40902476627534 25.52631642241929 27.325401005851834 23.739257805453533 40 23.419367097436787 25.291088518328774 27.667058713173486 23.622485671060957 41 22.569492047228376 25.47219957331871 28.039262375320796 23.91904600413212 42 23.135434029155753 25.47628840191742 27.59863096397742 23.789646604949407 43 23.07458263883377 24.475126693556728 27.88857701549185 24.561713652117653 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 104.0 1 94.5 2 85.0 3 295.5 4 506.0 5 506.0 6 774.0 7 1042.0 8 1117.0 9 1192.0 10 1701.5 11 2211.0 12 2211.0 13 3757.5 14 5304.0 15 7423.5 16 9543.0 17 9047.5 18 8552.0 19 8552.0 20 9825.0 21 11098.0 22 10391.5 23 9685.0 24 10699.0 25 11713.0 26 11713.0 27 12990.5 28 14268.0 29 16214.0 30 18160.0 31 20881.0 32 23602.0 33 23602.0 34 26834.5 35 30067.0 36 33412.5 37 36758.0 38 40328.5 39 43899.0 40 43899.0 41 47203.5 42 50508.0 43 51643.0 44 52778.0 45 53601.0 46 54424.0 47 54424.0 48 54732.5 49 55041.0 50 55204.0 51 55367.0 52 55755.5 53 56144.0 54 56144.0 55 54534.5 56 52925.0 57 50671.0 58 48417.0 59 44666.5 60 40916.0 61 40916.0 62 38281.5 63 35647.0 64 32087.5 65 28528.0 66 25096.5 67 21665.0 68 21665.0 69 18692.0 70 15719.0 71 13823.0 72 11927.0 73 10684.0 74 9441.0 75 9441.0 76 8112.5 77 6784.0 78 5462.0 79 4140.0 80 2907.5 81 1675.0 82 1675.0 83 1247.0 84 819.0 85 642.0 86 465.0 87 352.5 88 240.0 89 240.0 90 187.0 91 134.0 92 82.0 93 30.0 94 20.0 95 10.0 96 10.0 97 5.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 831534.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.875950849897286 #Duplication Level Percentage of deduplicated Percentage of total 1 88.89707007607926 55.894878088034346 2 6.30011999741404 7.922520706117204 3 1.6684433180538816 3.147148801853863 4 0.755193602172614 1.8993406324944866 5 0.43513420845734085 1.3679738552036362 6 0.2848295696872194 1.0745358014550601 7 0.21538864908695982 0.9479936279532223 8 0.1618113622184314 0.8139234606240817 9 0.12841316378319725 0.726668979706091 >10 0.9779800177172933 12.485784405371177 >50 0.10841316126177078 4.780297530586604 >100 0.06546984866559216 7.131315547386327 >500 9.627918901927632E-4 0.4068049814064761 >1k 7.702335121542106E-4 1.4008135818074192 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3610 0.4341373894513032 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3438 0.41345272712841563 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2594 0.31195357014866504 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1928 0.2318606334798096 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 858 0.10318279228510199 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.607789940038531E-4 0.0 3 0.0 0.0 0.0 9.620773173436083E-4 0.0 4 0.0 0.0 0.0 0.0013228563113474613 0.0 5 0.0 0.0 0.0 0.0014431159760154124 0.0 6 0.0 0.0 0.0 0.0014431159760154124 0.0 7 0.0 0.0 0.0 0.0016836353053513145 0.0 8 0.0 0.0 0.0 0.0019241546346872166 0.0 9 0.0 0.0 0.0 0.003848309269374433 0.0 10 0.0 0.0 0.0 0.006012983233397552 0.0 11 0.0 0.0 0.0 0.006734541221405258 0.0 12 0.0 0.0 0.0 0.008297916862088622 0.0 13 0.0 0.0 0.0 0.00913973451476428 0.0 14 0.0 0.0 0.0 0.009981552167439936 0.0 15 0.0 0.0 0.0 0.012386745460798957 0.0 16 0.0 0.0 0.0 0.01599453540083749 0.0 17 0.0 0.0 0.0 0.019842844670211923 0.0 18 0.0 0.0 0.0 0.021526479975563236 0.0 19 0.0 0.0 0.0 0.023450634610250452 0.0 20 0.0 0.0 0.0 0.02525452958026972 0.0 21 0.0 0.0 0.0 0.03114725314899932 0.0 22 0.0 0.0 0.0 0.039805949005091795 0.0 23 0.0 0.0 0.0 0.05459788775924977 0.0 24 0.0 0.0 0.0 0.08213735096821057 0.0 25 0.0 0.0 0.0 0.08839085353094402 0.0 26 0.0 0.0 0.0 0.09957500234506346 0.0 27 0.0 0.0 0.0 0.1100375931711752 0.0 28 0.0 0.0 0.0 0.1319248521407423 0.0 29 0.0 0.0 0.0 0.1660785969064404 0.0 30 0.0 0.0 0.0 0.21851181070166703 0.0 31 0.0 0.0 0.0 0.3945719597755474 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGAACG 55 1.9018387E-5 23.545454 15 ACGCGTA 65 2.681365E-6 22.76923 27 TATACTG 110 7.4578566E-11 21.863636 5 CGAACGA 60 3.72469E-5 21.583334 16 GACGCGT 75 9.260719E-6 19.733334 26 CCGATAA 85 1.2444598E-6 19.588236 9 TAACGGC 50 0.0070332843 18.5 36 TAACGAA 70 1.21868245E-4 18.5 13 GTAATAC 70 1.21868245E-4 18.5 3 GTAAACG 105 4.79331E-7 17.619047 27 CGAACTA 95 3.6039619E-6 17.526314 24 ATAACGA 75 2.0664002E-4 17.266666 12 TCTAGCG 65 0.0015794373 17.076923 28 GTATAGG 110 7.801209E-7 16.818182 1 TTTCGGA 155 4.0017767E-10 16.709677 30 TCTTTCG 100 5.873855E-6 16.650002 10 TCGAGGC 90 4.4435787E-5 16.444445 14 CGCGTAG 90 4.4435787E-5 16.444445 28 AATACTG 185 1.8189894E-11 16.0 5 TCACGTA 185 1.8189894E-11 16.0 25 >>END_MODULE