##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630633.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 847241 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98661065741625 33.0 31.0 34.0 30.0 34.0 2 32.121305508113984 33.0 31.0 34.0 30.0 34.0 3 32.18141945444094 34.0 31.0 34.0 30.0 34.0 4 35.77723339640079 37.0 35.0 37.0 35.0 37.0 5 35.77343990670895 37.0 35.0 37.0 35.0 37.0 6 35.88736852914342 37.0 35.0 37.0 35.0 37.0 7 35.82853757077384 37.0 35.0 37.0 35.0 37.0 8 35.86204515598277 37.0 35.0 37.0 35.0 37.0 9 37.49546351038252 39.0 37.0 39.0 35.0 39.0 10 37.43579217719633 39.0 37.0 39.0 34.0 39.0 11 37.54791257741304 39.0 37.0 39.0 35.0 39.0 12 37.50798179030524 39.0 37.0 39.0 35.0 39.0 13 37.54830797848546 39.0 37.0 39.0 35.0 39.0 14 38.737801876915775 40.0 38.0 41.0 35.0 41.0 15 38.73830232484028 40.0 38.0 41.0 35.0 41.0 16 38.64503134291188 40.0 38.0 41.0 34.0 41.0 17 38.70960919030122 40.0 38.0 41.0 35.0 41.0 18 38.71681965343981 40.0 38.0 41.0 35.0 41.0 19 38.80928921050799 40.0 38.0 41.0 35.0 41.0 20 38.791232954967946 40.0 38.0 41.0 35.0 41.0 21 38.742939730253845 40.0 38.0 41.0 35.0 41.0 22 38.627382291461345 40.0 38.0 41.0 34.0 41.0 23 38.52469958370759 40.0 38.0 41.0 34.0 41.0 24 38.45745779536165 40.0 38.0 41.0 34.0 41.0 25 38.38041124072135 40.0 38.0 41.0 34.0 41.0 26 38.18435250418712 40.0 37.0 41.0 34.0 41.0 27 37.97724260275412 40.0 37.0 41.0 33.0 41.0 28 37.82376679126718 40.0 37.0 41.0 33.0 41.0 29 37.7261818065934 40.0 37.0 41.0 33.0 41.0 30 37.551150145000065 40.0 36.0 41.0 33.0 41.0 31 37.448624417373566 39.0 36.0 41.0 33.0 41.0 32 37.24698521436049 39.0 35.0 41.0 32.0 41.0 33 37.04949477185358 39.0 35.0 41.0 31.0 41.0 34 36.92469321007836 39.0 35.0 41.0 31.0 41.0 35 36.74992003455923 39.0 35.0 41.0 31.0 41.0 36 36.6562383076362 39.0 35.0 41.0 31.0 41.0 37 36.40923538875007 39.0 35.0 41.0 30.0 41.0 38 36.1582607546141 39.0 35.0 41.0 30.0 41.0 39 35.95111898503495 39.0 35.0 41.0 29.0 41.0 40 35.63252604630796 39.0 35.0 41.0 27.0 41.0 41 35.446041917234886 38.0 35.0 41.0 26.0 41.0 42 35.12230404335956 38.0 35.0 40.0 24.0 41.0 43 34.30240392049016 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 1.0 10 4.0 11 2.0 12 5.0 13 4.0 14 1.0 15 5.0 16 13.0 17 11.0 18 34.0 19 82.0 20 170.0 21 345.0 22 642.0 23 1043.0 24 1794.0 25 2837.0 26 4265.0 27 6208.0 28 8981.0 29 12228.0 30 15968.0 31 19882.0 32 24587.0 33 31727.0 34 40723.0 35 52497.0 36 72937.0 37 118082.0 38 182564.0 39 249597.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.212588861964896 19.96338704099542 12.635837972902634 21.18818612413705 2 20.65870277760401 21.08597199616166 32.771194972858964 25.48413025337537 3 23.60886689855661 24.675269492387645 28.061673124884184 23.654190484171565 4 13.9307469775424 15.767296436315052 33.19929040261271 37.102666183529834 5 13.304596921064963 39.71797870971778 31.99455644851937 14.98286792069789 6 33.26267260437113 32.58270078997593 16.593743692762743 17.560882912890193 7 27.696251715863607 32.41592415853341 20.441409233028146 19.44641489257484 8 31.094222305105628 29.099394387193257 19.27656947668963 20.529813831011484 9 28.24190519580615 12.148019276687506 21.853050076660598 37.757025450845745 10 21.696424039913083 26.684497091146437 29.917461501509017 21.701617367431464 11 34.11213574413892 22.42620458641638 19.180256857257852 24.28140281218685 12 23.180771468802856 28.643915957797134 25.921668096798907 22.25364447660111 13 30.53322490294969 19.659931471682793 27.439536094216404 22.367307531151113 14 23.067344474594595 22.03304608724082 27.236642230486957 27.662967207677625 15 27.615755139328712 25.274626700077075 25.600862092368047 21.50875606822616 16 24.850426265962106 24.611769260458356 27.033158215903146 23.504646257676388 17 23.768089599063313 25.93606777764532 26.281896178301096 24.01394644499027 18 22.56087701138165 21.969663885482408 30.289492600098438 25.179966503037505 19 22.47447892630314 24.447117172091527 30.357005857837382 22.721398043767948 20 24.20043411496847 21.871580813487544 31.761682921388367 22.166302150155623 21 24.62994590677269 23.77056823265163 29.822801304469447 21.776684556106233 22 25.842823942656224 22.801894620302843 30.032068797426 21.323212639614937 23 23.7123793584116 22.693660953612962 30.248890221318376 23.34506946665707 24 21.823660564113396 24.90235954114591 30.09061176217865 23.183368132562045 25 22.4827410382642 24.567507946381255 30.302475918894388 22.647275096460156 26 22.633819656980716 25.75772418945731 29.336162909963043 22.272293243598927 27 23.476082956325296 24.468716693361156 30.181140903237687 21.87405944707586 28 21.74292792723676 24.653433910776272 30.324665591018373 23.27897257096859 29 21.374909854456998 24.631244238652283 31.332171129584147 22.661674777306576 30 19.78150254768124 26.63079336339955 31.470148399333837 22.117555689585373 31 22.937629316805964 26.511818951160294 28.46982145576052 22.080730276273222 32 21.352130031478648 25.512693554726457 30.038914547336592 23.096261866458303 33 20.391600500920045 25.477402533635647 29.918169682534252 24.21282728291006 34 22.316200467163416 24.935998139844507 30.727030443521976 22.020770949470105 35 20.435153633971918 26.253096816608263 30.716171667801724 22.595577881618098 36 21.28072177810092 27.27830688080487 29.101636960439826 22.339334380654382 37 21.906399713894867 25.372355681559323 30.116224309257934 22.60502029528788 38 21.032858419269136 25.011065328519276 29.561954626841715 24.394121625369877 39 21.58760022236884 26.078058073204673 29.956175397555125 22.378166306871364 40 20.208299645555396 25.58221332537023 29.998666259069147 24.210820770005228 41 20.45887769831724 25.984460147702954 30.039622728361827 23.517039425617977 42 20.66908943264077 26.55855889882572 30.593184229752808 22.179167438780702 43 19.61649636880179 24.768041206693255 29.63277272936508 25.98268969513987 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 453.0 1 400.0 2 347.0 3 923.5 4 1500.0 5 1500.0 6 2188.5 7 2877.0 8 2936.5 9 2996.0 10 4362.0 11 5728.0 12 5728.0 13 10311.5 14 14895.0 15 19474.5 16 24054.0 17 22197.0 18 20340.0 19 20340.0 20 21469.0 21 22598.0 22 16248.0 23 9898.0 24 8884.5 25 7871.0 26 7871.0 27 8632.0 28 9393.0 29 10796.0 30 12199.0 31 14321.0 32 16443.0 33 16443.0 34 19652.5 35 22862.0 36 25331.0 37 27800.0 38 32444.5 39 37089.0 40 37089.0 41 39652.0 42 42215.0 43 45347.0 44 48479.0 45 49339.5 46 50200.0 47 50200.0 48 55487.5 49 60775.0 50 60587.5 51 60400.0 52 62349.0 53 64298.0 54 64298.0 55 60761.5 56 57225.0 57 52126.0 58 47027.0 59 43964.0 60 40901.0 61 40901.0 62 39280.0 63 37659.0 64 34437.5 65 31216.0 66 29801.0 67 28386.0 68 28386.0 69 22273.0 70 16160.0 71 13805.0 72 11450.0 73 7977.5 74 4505.0 75 4505.0 76 3469.0 77 2433.0 78 1885.0 79 1337.0 80 1100.5 81 864.0 82 864.0 83 828.0 84 792.0 85 788.5 86 785.0 87 615.0 88 445.0 89 445.0 90 350.5 91 256.0 92 166.5 93 77.0 94 43.0 95 9.0 96 9.0 97 6.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 847241.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.70481005157811 #Duplication Level Percentage of deduplicated Percentage of total 1 83.07177493710437 31.322054946509663 2 8.770475554154809 6.613782296628326 3 2.4753095828984577 2.799932329261121 4 1.1589161596796045 1.7478685466569541 5 0.7355125201657945 1.3866179931704394 6 0.5130901584438825 1.160758017807642 7 0.3788817876449195 0.9999966084607826 8 0.28670491540922927 0.8648123501087007 9 0.2352161159063611 0.7981901074187392 >10 1.876448373173136 14.460867634910224 >50 0.2590524334389732 6.778234019141673 >100 0.20529275714528486 14.826482581090136 >500 0.02263564856732069 6.0172205246429815 >1k 0.009431520236383622 5.6697859602497624 >5k 6.287680157589081E-4 1.832832901619908 >10k+ 6.287680157589081E-4 2.7205631823230187 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12544 1.48057046342186 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10407 1.228339988267801 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9271 1.0942577141568928 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6191 0.7307247878702754 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 3229 0.38111942174658686 No Hit CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGC 2765 0.3263534224618497 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 2672 0.3153766165707278 No Hit TCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA 2255 0.26615803531698773 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 2161 0.25506319925499354 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 1945 0.22956868234658145 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 1855 0.2189459669680764 No Hit GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC 1777 0.20973961364003868 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1694 0.19994310945763957 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 1677 0.19793659655281082 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1663 0.19628417416059893 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 1653 0.19510387245187613 No Hit GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 1643 0.19392357074315336 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1628 0.1921531181800692 No Hit ACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCG 1455 0.17173389861916505 No Hit ACCCGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGT 1368 0.16146527375327682 No Hit CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTG 1334 0.15745224794361934 No Hit GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAAT 1315 0.15520967469704605 No Hit GTACATGGGCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCAC 1300 0.15343922213396188 No Hit TCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCAC 1272 0.15013437734953808 No Hit ACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATC 1263 0.1490721058116876 No Hit GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGG 1229 0.1450590800020301 No Hit GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG 1174 0.1385674206040548 No Hit CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT 1130 0.13337409308567455 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1110 0.13101348966822898 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 1105 0.1304233388138676 No Hit GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 1071 0.12641031300421013 No Hit AGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGG 1048 0.12369561907414772 No Hit TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT 1035 0.12216122685280813 RNA PCR Primer, Index 39 (95% over 23bp) ACGCAGAGTACATGGGCAACTTCTTAGAGGGACAAGTGGCGTT 1005 0.11862032172663976 No Hit CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCT 999 0.11791214070140608 No Hit GTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACAC 994 0.1173219898470447 No Hit TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGC 984 0.11614168813832192 No Hit GACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGTC 983 0.11602365796744964 No Hit CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGC 969 0.11437123557523775 No Hit GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG 967 0.11413517523349319 No Hit GAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGG 959 0.11319093386651495 No Hit ACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAG 895 0.10563700293068914 No Hit GCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGA 895 0.10563700293068914 No Hit TAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGC 892 0.10528291241807232 No Hit GCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGC 879 0.10374852019673268 No Hit GTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGA 862 0.10174200729190395 No Hit GCGTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGC 855 0.10091579609579802 No Hit GAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGC 855 0.10091579609579802 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.721206834891135E-4 0.0 3 0.0 0.0 0.0 0.0012983318795950622 0.0 4 0.0 0.0 0.0 0.0025966637591901243 0.0 5 0.0 0.0 0.0 0.002950754271806959 0.0 6 0.0 0.0 0.0 0.002950754271806959 0.0 7 0.0 0.0 0.0 0.0030687844426792376 0.0 8 0.0 0.0 0.0 0.003186814613551516 0.0 9 0.0 0.0 0.0 0.005193327518380249 0.0 10 0.0 0.0 0.0 0.006845749910592146 0.0 11 0.0 0.0 0.0 0.00861620247367632 0.0 12 0.0 1.1803017087227837E-4 0.0 0.009560443840654548 0.0 13 0.0 1.1803017087227837E-4 0.0 0.010622715378505053 0.0 14 0.0 1.1803017087227837E-4 0.0 0.012039077428972395 0.0 15 0.0 1.1803017087227837E-4 0.0 0.015579982555140745 0.0 16 0.0 1.1803017087227837E-4 0.0 0.02537648673753985 0.0 17 0.0 1.1803017087227837E-4 0.0 0.03906798655872414 0.0 18 0.0 1.1803017087227837E-4 0.0 0.04461540458972123 0.0 19 0.0 1.1803017087227837E-4 0.0 0.05429387860124805 0.0 20 0.0 1.1803017087227837E-4 0.0 0.060549477657478805 0.0 21 0.0 1.1803017087227837E-4 0.0 0.07447703782040765 0.0 22 0.0 1.1803017087227837E-4 0.0 0.09961746421620295 0.0 23 0.0 2.3606034174455674E-4 0.0 0.13962969214190532 0.0 24 0.0 2.3606034174455674E-4 0.0 0.19604811381885437 0.0 25 0.0 2.3606034174455674E-4 0.0 0.2122182472283565 0.0 26 0.0 2.3606034174455674E-4 0.0 0.2368865529406627 0.0 27 0.0 2.3606034174455674E-4 0.0 0.26356137155779763 0.0 28 0.0 2.3606034174455674E-4 0.0 0.31242586229892083 0.0 29 0.0 2.3606034174455674E-4 0.0 0.38678486994845623 0.0 30 0.0 2.3606034174455674E-4 0.0 0.509654277826498 0.0 31 0.0 2.3606034174455674E-4 0.0 0.8659873636899064 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAAA 35 8.867462E-4 26.428572 1 TACATAC 50 9.087402E-6 25.900002 3 CAATACC 55 1.901894E-5 23.545454 4 TAGAACC 40 0.0019307706 23.125 25 TATATCG 40 0.0019307706 23.125 5 CTACCCG 40 0.0019307706 23.125 10 GTATATG 50 2.7012892E-4 22.2 1 CAAACGC 60 3.7247984E-5 21.583332 10 CCAATAC 60 3.7247984E-5 21.583332 3 CCAAACG 60 3.7247984E-5 21.583332 9 GGTATCA 4440 0.0 21.375 1 CTATGGT 45 0.00382499 20.555555 9 AAACGAT 45 0.00382499 20.555555 17 GGCTTAA 55 5.141562E-4 20.181818 23 GGTATTG 55 5.141562E-4 20.181818 33 ATGCGAG 65 6.899393E-5 19.923077 7 AGACTAT 50 0.0070333914 18.5 6 GTATTAT 60 9.234085E-4 18.5 1 CCGTCTT 140 9.458745E-11 18.5 37 TATACTT 50 0.0070333914 18.5 34 >>END_MODULE