##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630622.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1240009 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.696238495043183 31.0 31.0 34.0 30.0 34.0 2 31.864518725267317 33.0 31.0 34.0 30.0 34.0 3 31.96462122452337 33.0 31.0 34.0 30.0 34.0 4 35.61690761921889 37.0 35.0 37.0 33.0 37.0 5 35.57057408454293 37.0 35.0 37.0 33.0 37.0 6 35.60500770558923 37.0 35.0 37.0 33.0 37.0 7 35.576815168277 37.0 35.0 37.0 33.0 37.0 8 35.57490227893507 37.0 35.0 37.0 33.0 37.0 9 37.24150550520198 39.0 37.0 39.0 34.0 39.0 10 37.109031466707094 39.0 37.0 39.0 33.0 39.0 11 37.23173864060664 39.0 37.0 39.0 34.0 39.0 12 37.1496214946827 39.0 37.0 39.0 33.0 39.0 13 37.21969276029448 39.0 37.0 39.0 34.0 39.0 14 38.39817533582418 40.0 38.0 41.0 34.0 41.0 15 38.36486186793805 40.0 38.0 41.0 34.0 41.0 16 38.33874270267393 40.0 38.0 41.0 34.0 41.0 17 38.3229452366878 40.0 38.0 41.0 34.0 41.0 18 38.31204934802893 40.0 38.0 41.0 34.0 41.0 19 38.31928558583043 40.0 38.0 41.0 34.0 41.0 20 38.300199434036365 40.0 38.0 41.0 34.0 41.0 21 38.21871212225073 40.0 38.0 41.0 34.0 41.0 22 38.15142067517252 40.0 38.0 41.0 33.0 41.0 23 38.1311159838356 40.0 38.0 41.0 33.0 41.0 24 38.07216076657508 40.0 37.0 41.0 33.0 41.0 25 38.0102975059052 40.0 37.0 41.0 33.0 41.0 26 37.785870102555705 40.0 37.0 41.0 33.0 41.0 27 37.65151381965776 40.0 37.0 41.0 32.0 41.0 28 37.534522733302744 40.0 37.0 41.0 32.0 41.0 29 37.42387918152207 39.0 37.0 41.0 32.0 41.0 30 37.33743303476023 39.0 36.0 41.0 31.0 41.0 31 37.280489093224325 39.0 36.0 41.0 31.0 41.0 32 37.186439775840334 39.0 36.0 41.0 31.0 41.0 33 37.125619249537706 39.0 36.0 41.0 31.0 41.0 34 37.04560450770922 39.0 36.0 41.0 31.0 41.0 35 36.9730526149407 39.0 36.0 41.0 31.0 41.0 36 36.923323137170776 39.0 36.0 40.0 31.0 41.0 37 36.71675044294033 39.0 35.0 40.0 30.0 41.0 38 36.5843514039011 39.0 35.0 40.0 30.0 41.0 39 36.50706567452333 39.0 35.0 40.0 30.0 41.0 40 36.377140004629 39.0 35.0 40.0 30.0 41.0 41 36.23944422984027 39.0 35.0 40.0 30.0 41.0 42 36.140924783610444 39.0 35.0 40.0 29.0 41.0 43 35.22736367236044 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 2.0 12 2.0 13 0.0 14 3.0 15 4.0 16 14.0 17 35.0 18 66.0 19 131.0 20 272.0 21 484.0 22 960.0 23 1669.0 24 2670.0 25 4286.0 26 6291.0 27 9118.0 28 12510.0 29 17402.0 30 23019.0 31 29565.0 32 37646.0 33 47886.0 34 62238.0 35 82659.0 36 115296.0 37 177714.0 38 315423.0 39 292637.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.23556603218202 19.201150959388197 11.924913448208843 24.638369560220934 2 19.9825162559304 20.610656858135705 32.78266528710679 26.624161598827108 3 21.65653636384897 22.635238937781903 28.561970114733036 27.146254583636086 4 15.198438075852675 14.874892037073925 33.38056417332455 36.54610571374885 5 15.057310067910798 36.58328286326954 33.64612676198318 14.713280306836483 6 36.698120739446246 33.43411217176649 14.720699607825427 15.147067480961832 7 29.928169876186384 29.644704191663124 20.733962414788927 19.69316351736157 8 28.762371886010506 31.34146607000433 19.384214146832804 20.51194789715236 9 26.679322488788387 13.2315975125987 19.86808160263353 40.220998395979386 10 18.00374029543334 26.270454488636773 31.983961406731726 23.74184380919816 11 36.4401387409285 21.3194420363078 20.71275289130966 21.527666331454046 12 23.180396271317385 25.265623072090605 27.380123853939768 24.17385680265224 13 31.095742047033532 19.109135498210094 24.73635272002058 25.058769734735797 14 23.48950693099808 20.735010794276494 24.70699809436867 31.068484180356755 15 26.728999547583932 27.46165552024219 21.851857526840533 23.95748740533335 16 26.01400473706239 25.61618504381823 23.787407994619393 24.582402224499983 17 24.560708833564917 25.783199960645447 24.751755834030238 24.904335371759398 18 23.98353560337062 24.07393817302939 26.947223770150053 24.995302453449934 19 25.194655845239833 24.51095113019341 26.718596397284212 23.575796627282543 20 25.754329202449338 23.85982682383757 25.851263982761413 24.53457999095168 21 25.806103020220018 24.208856548621824 26.022149839235038 23.962890591923124 22 25.657797645017094 24.41740342207194 26.05497218165352 23.86982675125745 23 24.717320600092417 24.212324265388396 25.924005390283455 25.146349744235728 24 24.404177711613386 25.139817533582416 26.215777466131296 24.240227288672905 25 24.89320642027598 24.84401322893624 25.594249719155265 24.668530631632514 26 24.765626701096526 25.332638714719007 25.853602675464455 24.048131908720016 27 25.011431368643294 24.158695622370484 25.914811908623243 24.91506110036298 28 24.169824573853898 24.862642125984568 26.218761315442062 24.74877198471947 29 24.298130094217058 25.354574039381973 26.441098411382498 23.90619745501847 30 24.45667733056776 25.1947364898158 25.86626387389124 24.4823223057252 31 23.930471472384475 25.882634722812497 26.062149548914565 24.124744255888466 32 23.693698997345987 25.00893138678832 25.757393696336074 25.539975919529617 33 23.1689447415301 25.456105560524158 26.490614181026107 24.884335516919634 34 25.140059467310316 24.362161887534686 25.979408213972636 24.518370431182355 35 24.275307679218457 24.64498241545021 26.316663830665743 24.76304607466559 36 23.35095954948714 25.582233677336212 26.487549687139367 24.57925708603728 37 24.2822431127516 24.254340089467092 26.94561087863072 24.517805919150586 38 24.09772832293959 24.36691991751673 26.777225004012067 24.758126755531613 39 23.94918101400877 24.089583220766947 27.021416780039498 24.939818985184786 40 23.27216979876759 24.096357365148155 27.52568731355982 25.10578552252443 41 22.25556427413027 24.471354643393717 28.162860108273406 25.11022097420261 42 23.042332757262248 24.257969095385597 28.376326300857496 24.323371846494663 43 23.074026075617194 23.915149002950788 28.060522141371553 24.95030278006047 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 142.0 1 164.5 2 187.0 3 499.5 4 812.0 5 812.0 6 1085.5 7 1359.0 8 1420.5 9 1482.0 10 2043.0 11 2604.0 12 2604.0 13 4435.0 14 6266.0 15 8852.5 16 11439.0 17 10844.5 18 10250.0 19 10250.0 20 12553.5 21 14857.0 22 13580.0 23 12303.0 24 13757.0 25 15211.0 26 15211.0 27 17285.5 28 19360.0 29 22201.0 30 25042.0 31 28588.0 32 32134.0 33 32134.0 34 36242.0 35 40350.0 36 44615.0 37 48880.0 38 53896.5 39 58913.0 40 58913.0 41 61306.0 42 63699.0 43 65414.0 44 67129.0 45 69199.5 46 71270.0 47 71270.0 48 76694.0 49 82118.0 50 82858.0 51 83598.0 52 83674.0 53 83750.0 54 83750.0 55 81657.5 56 79565.0 57 78285.0 58 77005.0 59 78087.5 60 79170.0 61 79170.0 62 73606.5 63 68043.0 64 62725.0 65 57407.0 66 50138.5 67 42870.0 68 42870.0 69 38357.5 70 33845.0 71 28494.0 72 23143.0 73 17228.0 74 11313.0 75 11313.0 76 8357.5 77 5402.0 78 4350.5 79 3299.0 80 2805.5 81 2312.0 82 2312.0 83 1786.0 84 1260.0 85 1136.5 86 1013.0 87 869.0 88 725.0 89 725.0 90 572.5 91 420.0 92 233.5 93 47.0 94 30.0 95 13.0 96 13.0 97 7.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1240009.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.76291238807965 #Duplication Level Percentage of deduplicated Percentage of total 1 87.92462191999672 50.787822327197986 2 7.622283145699139 8.80570547084311 3 1.7425657663859406 3.0196702108265385 4 0.6967677030767357 1.6098932715065992 5 0.3804120680859324 1.098685448010795 6 0.24633428519198985 0.8537391440235083 7 0.1766317943161882 0.7141936802024698 8 0.12642213520485027 0.584200857580138 9 0.10122028305881677 0.5262100508000751 >10 0.7496051096083147 8.718070077346095 >50 0.10958447287489756 4.383857778886053 >100 0.11261261076916675 12.976450034441092 >500 0.008694868658274473 3.2798763353735048 >1k 0.0021035972560341466 2.212938371649915 >5k 1.402398170689431E-4 0.428686941312371 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5292 0.42677109601623864 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4636 0.3738682541820261 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3442 0.277578630477682 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2404 0.19386956062415675 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 2169 0.17491808527196173 No Hit GGCCTAGGTATGGGAAAAGACACAAAGAGGACACGCTGGCCTT 1936 0.1561278990717003 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 1827 0.14733764029132046 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA 1551 0.12507973732448716 No Hit GTATGCAGCTGATCTCCGTAGATACATCAACATGCTGACCAGG 1379 0.11120887025819974 No Hit GGGTACACTGGCTCCAGTGGGGCTCCCTGGGCACCCAGCAGTG 1264 0.1019347440220192 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.41933727900362E-4 0.0 3 0.0 0.0 0.0 4.032228798339367E-4 0.0 4 0.0 0.0 0.0 9.67734911601448E-4 0.0 5 0.0 1.6128915193357467E-4 0.0 0.0012096686395018101 0.0 6 0.0 1.6128915193357467E-4 0.0 0.0012096686395018101 0.0 7 0.0 2.41933727900362E-4 0.0 0.001451602367402172 0.0 8 0.0 2.41933727900362E-4 0.0 0.0015322469433689595 0.0 9 0.0 2.41933727900362E-4 0.0 0.0024193372790036203 0.0 10 0.0 2.41933727900362E-4 0.0 0.00395158422237258 0.0 11 0.0 2.41933727900362E-4 0.0 0.004193517950272942 0.0 12 0.0 2.41933727900362E-4 0.0 0.004274162526239729 0.0 13 0.0 2.41933727900362E-4 0.0 0.004516096254140091 0.0 14 0.0 2.41933727900362E-4 0.0 0.0054031865897747515 0.0 15 0.0 2.41933727900362E-4 0.0 0.0065322106533097744 0.0 16 0.0 2.41933727900362E-4 0.0 0.008628969628446245 0.0 17 8.064457596678733E-5 3.2257830386714934E-4 0.0 0.011128951483416652 0.0 18 8.064457596678733E-5 4.83867455800724E-4 0.0 0.012338620122918463 0.0 19 8.064457596678733E-5 4.83867455800724E-4 0.0 0.014757957401922083 0.0 20 8.064457596678733E-5 4.83867455800724E-4 0.0 0.016451493497224617 0.0 21 8.064457596678733E-5 4.83867455800724E-4 0.0 0.01967727653589611 0.0 22 8.064457596678733E-5 4.83867455800724E-4 0.0 0.024677240245836927 0.0 23 8.064457596678733E-5 4.83867455800724E-4 0.0 0.033225565298316384 0.0 24 8.064457596678733E-5 5.645120317675113E-4 0.0 0.046773854060736655 0.0 25 8.064457596678733E-5 7.25801183701086E-4 0.0 0.051612528618743894 0.0 26 8.064457596678733E-5 7.25801183701086E-4 0.0 0.058789895879787966 0.0 27 8.064457596678733E-5 7.25801183701086E-4 0.0 0.07217689549027467 0.0 28 8.064457596678733E-5 7.25801183701086E-4 0.0 0.10717664145986038 0.0 29 8.064457596678733E-5 7.25801183701086E-4 0.0 0.15588596534379992 0.0 30 8.064457596678733E-5 7.25801183701086E-4 0.0 0.2229016079722002 0.0 31 8.064457596678733E-5 7.25801183701086E-4 0.0 0.4562870108200828 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACTCG 35 8.869792E-4 26.42857 19 CACCGTA 60 3.7265905E-5 21.583334 31 CGTATTA 45 0.003825976 20.555555 15 AGTCGGT 185 0.0 19.0 11 AAGACGG 285 0.0 18.824562 5 CGTAGTA 50 0.0070351874 18.5 2 CGCAAGA 280 0.0 18.5 2 TACGTGT 70 1.2192958E-4 18.5 7 GTCGGTG 205 0.0 18.04878 12 GCTTTAT 545 0.0 17.990826 1 GACGGAC 290 0.0 17.862068 7 TCGGTGA 225 0.0 17.266666 13 CGGTGAT 215 0.0 17.209303 14 CGAACGA 140 1.869921E-9 17.178572 16 GCAGTCG 210 0.0 16.738094 9 CAGTCGG 210 0.0 16.738094 10 GCGCAAG 300 0.0 16.65 1 CCTATAC 90 4.446412E-5 16.444445 3 ACGGACC 305 0.0 16.37705 8 TCTAGCG 215 0.0 16.348837 28 >>END_MODULE