##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630620.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2134973 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99339148551293 33.0 31.0 34.0 30.0 34.0 2 32.161747244578734 33.0 31.0 34.0 30.0 34.0 3 32.26163609563212 34.0 31.0 34.0 30.0 34.0 4 35.8476069720788 37.0 35.0 37.0 35.0 37.0 5 35.822786049284936 37.0 35.0 37.0 35.0 37.0 6 35.85479722694385 37.0 35.0 37.0 35.0 37.0 7 35.83116414118586 37.0 35.0 37.0 35.0 37.0 8 35.824529865248884 37.0 35.0 37.0 35.0 37.0 9 37.55004723713134 39.0 37.0 39.0 35.0 39.0 10 37.456636219755474 39.0 37.0 39.0 34.0 39.0 11 37.56790928971935 39.0 37.0 39.0 35.0 39.0 12 37.49789997344229 39.0 37.0 39.0 35.0 39.0 13 37.546733377892835 39.0 37.0 39.0 35.0 39.0 14 38.81696396160513 40.0 38.0 41.0 35.0 41.0 15 38.789994533888716 40.0 38.0 41.0 35.0 41.0 16 38.76790900868536 40.0 38.0 41.0 35.0 41.0 17 38.7580123964097 40.0 38.0 41.0 35.0 41.0 18 38.748649280342185 40.0 38.0 41.0 35.0 41.0 19 38.78185906800695 40.0 38.0 41.0 35.0 41.0 20 38.76080259563002 40.0 38.0 41.0 35.0 41.0 21 38.68857311076065 40.0 38.0 41.0 34.0 41.0 22 38.629295077736344 40.0 38.0 41.0 34.0 41.0 23 38.60562498916848 40.0 38.0 41.0 34.0 41.0 24 38.55320559089038 40.0 38.0 41.0 34.0 41.0 25 38.50672865652165 40.0 38.0 41.0 34.0 41.0 26 38.31981388055024 40.0 38.0 41.0 34.0 41.0 27 38.19706947113617 40.0 38.0 41.0 33.0 41.0 28 38.10914751615126 40.0 38.0 41.0 33.0 41.0 29 37.99303644589416 40.0 37.0 41.0 33.0 41.0 30 37.92099712736414 40.0 37.0 41.0 33.0 41.0 31 37.87447569594557 40.0 37.0 41.0 33.0 41.0 32 37.75839788137836 40.0 37.0 41.0 33.0 41.0 33 37.719710272682605 40.0 37.0 41.0 33.0 41.0 34 37.63449889061829 40.0 37.0 41.0 33.0 41.0 35 37.56993976036231 40.0 37.0 41.0 32.0 41.0 36 37.522960711915324 40.0 37.0 41.0 32.0 41.0 37 37.331093648491105 40.0 36.0 41.0 31.0 41.0 38 37.20772768554919 40.0 36.0 41.0 31.0 41.0 39 37.13706730717438 40.0 36.0 41.0 31.0 41.0 40 37.02836101440159 39.0 36.0 41.0 31.0 41.0 41 36.894007558877796 39.0 35.0 41.0 31.0 41.0 42 36.79623817256705 39.0 35.0 41.0 30.0 41.0 43 35.94583678575795 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 2.0 10 2.0 11 8.0 12 6.0 13 1.0 14 0.0 15 5.0 16 13.0 17 29.0 18 88.0 19 162.0 20 328.0 21 667.0 22 1161.0 23 2023.0 24 3395.0 25 5358.0 26 8294.0 27 11806.0 28 16842.0 29 23670.0 30 32315.0 31 41355.0 32 53201.0 33 68745.0 34 90899.0 35 120483.0 36 169377.0 37 260577.0 38 468118.0 39 756042.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.66664121747675 19.085534102773195 12.060480390150133 25.187344289599917 2 19.019537952002203 21.01525405707707 34.451255355454144 25.513952635466588 3 20.905463441458043 23.255984970301732 29.003973352356212 26.834578235884017 4 14.71845311392697 15.547409733050488 33.79977170671479 35.93436544630775 5 14.49526527970143 36.79971596830499 34.02722188992554 14.677796862068046 6 35.11594760214766 33.98534782407084 15.661228502655536 15.237476071125958 7 28.843924489911583 30.32520785977153 21.4191935916754 19.41167405864149 8 27.10437087494783 32.9391050847013 20.193697999927867 19.762826040422993 9 26.534621280924863 13.792914477138588 20.17917790997825 39.493286331958295 10 17.291085179999936 26.606050755677003 32.8238343061013 23.279029758221768 11 35.16241188998643 21.818964455288192 21.423643296659957 21.59498035806542 12 21.60359873403551 25.68294774688017 28.83099692595644 23.882456593127877 13 29.832180547482334 20.062923512381655 25.566833866283083 24.538062073852927 14 22.997855242197442 21.413479233695227 25.377042238941666 30.21162328516567 15 25.97147598587898 27.439035528786548 22.7047836202144 23.884704865120074 16 25.306783739185462 26.270870872840078 24.420730379260068 24.001615008714396 17 23.43790764567046 26.544644826890085 25.826977671380387 24.190469856059067 18 23.28287055620844 24.958582614393716 27.41065109488504 24.3478957345128 19 23.93177805995673 25.489127965552726 27.24540310345845 23.333690871032093 20 24.503775925971897 24.681483091355254 27.20540259759725 23.609338385075596 21 24.639093796502344 25.255401356363755 26.41663384033428 23.688871006799616 22 24.56204364176971 25.019145441183564 26.532373008932662 23.88643790811406 23 23.857866118213206 25.32491043212256 26.794249857023956 24.02297359264028 24 23.957398992867827 25.79264468449952 26.543145978895282 23.706810343737367 25 24.2580116938247 25.33118685810078 26.498976802048553 23.91182464602597 26 23.886203713114874 26.065341341553268 26.498133700051476 23.550321245280383 27 24.43623408820627 25.238070926423894 26.16042451122333 24.16527047414651 28 23.489290028492164 25.477090342594494 27.00797621328232 24.025643415631016 29 23.184321300550405 25.909086438095468 27.1360808778378 23.770511383516325 30 23.161370190630045 26.42843726829332 27.118890964897446 23.291301576179183 31 23.785687219463668 26.166092030203657 26.348857807569466 23.699362942763212 32 23.025958642099923 25.926088995036473 26.735139039229068 24.31281332363454 33 23.026989100096348 25.638919087032953 27.0953309479792 24.2387608648915 34 23.861472721200688 25.466411050631553 26.823243197923347 23.848873030244413 35 23.760113125552408 25.529081632414087 27.300111055268616 23.410694186764893 36 23.16038657163346 25.926042156036633 26.86230692378779 24.051264348542112 37 23.76503122053534 25.113479186856225 27.03711007118123 24.084379521427206 38 23.055888762996066 25.104813971886298 27.78241223659503 24.056885028522608 39 23.23888873536106 25.065281856023475 27.549247695404112 24.14658171321136 40 22.676633381312083 25.067670645015184 28.197967843153048 24.057728130519685 41 22.103558218300652 25.026592842157726 28.750433846235996 24.11941509330563 42 22.81771244882254 24.9108068345595 28.372349439547946 23.899131277070015 43 22.115876875257907 24.574315459727124 28.480453851172825 24.829353813842143 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 214.0 1 231.0 2 248.0 3 735.5 4 1223.0 5 1223.0 6 1794.5 7 2366.0 8 2368.5 9 2371.0 10 3458.0 11 4545.0 12 4545.0 13 7969.0 14 11393.0 15 15472.0 16 19551.0 17 19344.5 18 19138.0 19 19138.0 20 23046.5 21 26955.0 22 26195.5 23 25436.0 24 28186.0 25 30936.0 26 30936.0 27 35034.0 28 39132.0 29 45854.0 30 52576.0 31 59511.5 32 66447.0 33 66447.0 34 73026.5 35 79606.0 36 87157.0 37 94708.0 38 103508.5 39 112309.0 40 112309.0 41 116351.5 42 120394.0 43 121247.5 44 122101.0 45 125791.0 46 129481.0 47 129481.0 48 133828.0 49 138175.0 50 142159.0 51 146143.0 52 150659.0 53 155175.0 54 155175.0 55 148768.0 56 142361.0 57 136005.5 58 129650.0 59 120550.0 60 111450.0 61 111450.0 62 103977.5 63 96505.0 64 86160.0 65 75815.0 66 66706.0 67 57597.0 68 57597.0 69 49946.0 70 42295.0 71 36968.0 72 31641.0 73 25458.5 74 19276.0 75 19276.0 76 15152.5 77 11029.0 78 9069.0 79 7109.0 80 5603.5 81 4098.0 82 4098.0 83 3153.0 84 2208.0 85 1844.0 86 1480.0 87 1299.0 88 1118.0 89 1118.0 90 878.0 91 638.0 92 348.0 93 58.0 94 37.5 95 17.0 96 17.0 97 11.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2134973.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.05916875838688 #Duplication Level Percentage of deduplicated Percentage of total 1 85.67446729774653 50.59862822422511 2 9.063973760456694 10.70621511880805 3 2.271452162486317 4.024502297726467 4 0.8685597385791838 2.051856647099536 5 0.48458584607286037 1.4309618630571375 6 0.2938092087953071 1.04112765870061 7 0.20029178456220806 0.8280346413764541 8 0.14388863293809334 0.6798354444083552 9 0.10647240803116678 0.5659354722622056 >10 0.6888012147552975 8.046576233169683 >50 0.09911596527466653 4.115110438523161 >100 0.09632547712964558 11.296903211800108 >500 0.007145050822033398 2.8665153182069045 >1k 8.732839893596365E-4 0.7507975496090276 >5k 2.3816836073444633E-4 0.996999881027063 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8490 0.397663108620109 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6802 0.31859887689446187 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5972 0.2797225070293629 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4055 0.18993214434093547 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.002154593992523559 0.0 3 0.0 0.0 0.0 0.0030445349894354635 0.0 4 0.0 0.0 0.0 0.00459022198407193 0.0 5 0.0 0.0 0.0 0.0049649339827716795 0.0 6 0.0 0.0 0.0 0.005152289982121553 0.0 7 0.0 0.0 0.0 0.005808035979846115 0.0 8 0.0 0.0 0.0 0.0060422309790334585 0.0 9 0.0 0.0 0.0 0.010117223964893233 0.0 10 0.0 0.0 0.0 0.014004860951403133 0.0 11 0.0 0.0 0.0 0.015737903945389473 0.0 12 0.0 0.0 0.0 0.016393649943114035 0.0 13 0.0 0.0 0.0 0.01756462493905075 0.0 14 0.0 0.0 0.0 0.018407726936125187 0.0 15 0.0 0.0 0.0 0.019812896931249248 0.0 16 0.0 0.0 0.0 0.02187381292409787 0.0 17 0.0 0.0 0.0 0.024777830914020926 0.0 18 0.0 0.0 0.0 0.026510873908007267 0.0 19 0.0 0.0 0.0 0.028712306900368294 0.0 20 0.0 0.0 0.0 0.03138212989110401 0.0 21 0.0 0.0 0.0 0.034754537879401755 0.0 22 0.0 0.0 0.0 0.04089044685811015 0.0 23 0.0 0.0 0.0 0.048853076830479826 0.0 24 0.0 0.0 0.0 0.05971972479277256 0.0 25 0.0 0.0 0.0 0.06379471777863233 0.0 26 0.0 0.0 0.0 0.07194470375035188 0.0 27 4.683899983746867E-5 0.0 0.0 0.0870268616980168 0.0 28 4.683899983746867E-5 0.0 0.0 0.12135984857888132 0.0 29 4.683899983746867E-5 0.0 0.0 0.16904195041342443 0.0 30 4.683899983746867E-5 0.0 0.0 0.2341481601875059 0.0 31 4.683899983746867E-5 0.0 0.0 0.4503101444374238 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 280 0.0 17.839285 36 GGTATCA 3985 0.0 17.45546 1 GACGGAC 295 0.0 16.305084 7 ACGGGAC 140 3.477362E-8 15.857142 3 ATTGCCG 475 0.0 15.578947 11 AGTCCGT 85 5.366826E-4 15.235294 6 TTTGCGC 280 0.0 15.196428 17 TTGCGCG 285 0.0 14.929826 18 AGTCGGT 310 0.0 14.919354 11 CAAGACG 350 0.0 14.8 4 GGTCTAG 150 8.110874E-8 14.8 1 ACGGACC 340 0.0 14.691176 8 CGGTCCA 380 0.0 14.118422 10 CGGACCA 370 0.0 14.0 9 TCTTATA 2090 0.0 13.985647 37 ATTTGCG 320 0.0 13.875001 16 TAGACAG 280 0.0 13.875 5 CCGGTCC 390 0.0 13.756411 9 TCTTGCG 365 0.0 13.684932 2 CGTAGAC 95 0.0012456859 13.631579 3 >>END_MODULE