##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630601.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 19770 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79489124936773 31.0 31.0 34.0 30.0 34.0 2 31.955134041476985 33.0 31.0 34.0 30.0 34.0 3 31.933333333333334 33.0 31.0 34.0 30.0 34.0 4 35.677592311583204 37.0 35.0 37.0 33.0 37.0 5 35.65230146686899 37.0 35.0 37.0 33.0 37.0 6 35.73050075872534 37.0 35.0 37.0 35.0 37.0 7 35.622306525037935 37.0 35.0 37.0 33.0 37.0 8 35.70733434496712 37.0 35.0 37.0 33.0 37.0 9 37.357713707637835 39.0 37.0 39.0 34.0 39.0 10 37.252655538694995 39.0 37.0 39.0 34.0 39.0 11 37.35751138088012 39.0 37.0 39.0 34.0 39.0 12 37.30283257460799 39.0 37.0 39.0 34.0 39.0 13 37.39317147192716 39.0 37.0 39.0 34.0 39.0 14 38.46413758219524 40.0 38.0 41.0 34.0 41.0 15 38.420333839150224 40.0 38.0 41.0 34.0 41.0 16 38.29054122407688 40.0 38.0 41.0 33.0 41.0 17 38.28619119878604 40.0 38.0 41.0 34.0 41.0 18 38.41431461810824 40.0 38.0 41.0 34.0 41.0 19 38.43131006575619 40.0 38.0 41.0 34.0 41.0 20 38.453566009104705 40.0 38.0 41.0 34.0 41.0 21 38.4096105209914 40.0 38.0 41.0 34.0 41.0 22 38.20394537177542 40.0 38.0 41.0 33.0 41.0 23 38.18947900859889 40.0 38.0 41.0 33.0 41.0 24 38.074810318664646 40.0 37.0 41.0 33.0 41.0 25 37.9350531107739 40.0 37.0 41.0 33.0 41.0 26 37.8202832574608 40.0 37.0 41.0 33.0 41.0 27 37.522104198280225 40.0 37.0 41.0 32.0 41.0 28 37.52893272635306 40.0 36.0 41.0 32.0 41.0 29 37.342994436014166 39.0 36.0 41.0 31.0 41.0 30 37.16681841173495 39.0 36.0 41.0 31.0 41.0 31 37.05265553869499 39.0 35.0 41.0 31.0 41.0 32 36.75680323722813 39.0 35.0 40.0 31.0 41.0 33 36.56965098634294 39.0 35.0 40.0 30.0 41.0 34 36.52443095599393 39.0 35.0 40.0 30.0 41.0 35 36.37147192716237 39.0 35.0 40.0 30.0 41.0 36 36.39210925644917 39.0 35.0 40.0 30.0 41.0 37 36.19433485078402 39.0 35.0 40.0 30.0 41.0 38 36.0453717754173 38.0 35.0 40.0 29.0 41.0 39 35.898988366211434 38.0 35.0 40.0 28.0 41.0 40 35.478502781992916 38.0 34.0 40.0 27.0 41.0 41 35.40030349013657 38.0 34.0 40.0 27.0 41.0 42 35.15639858371269 38.0 34.0 40.0 26.0 41.0 43 34.063935255437535 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 2.0 15 0.0 16 0.0 17 2.0 18 0.0 19 1.0 20 3.0 21 8.0 22 18.0 23 37.0 24 47.0 25 64.0 26 120.0 27 167.0 28 248.0 29 331.0 30 436.0 31 498.0 32 659.0 33 758.0 34 998.0 35 1390.0 36 1895.0 37 2886.0 38 4468.0 39 4732.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.448659585230146 18.002023267577137 15.442589782498736 27.106727364693985 2 18.012139605462824 18.10318664643399 36.317653009610524 27.567020738492666 3 18.219524532119372 23.338391502276178 35.39706626201315 23.0450177035913 4 12.038442083965604 19.084471421345473 26.666666666666668 42.21041982802225 5 13.297926150733435 36.14567526555387 33.803743045017704 16.752655538694995 6 31.58320687910976 30.748609003540718 17.116843702579665 20.551340414769854 7 25.639858371269604 32.943854324734446 15.97875569044006 25.43753161355589 8 32.690945877592306 29.276681841173495 19.054122407688418 18.978249873545778 9 23.899848254931715 10.748609003540718 15.366717248356096 49.98482549317147 10 19.21092564491654 26.1608497723824 24.24886191198786 30.3793626707132 11 31.264542235710675 19.853313100657562 19.347496206373293 29.534648457258474 12 20.9357612544259 29.736975214972176 21.224076884167932 28.103186646433993 13 35.30096105209914 14.375316135558927 25.240263024785026 25.083459787556905 14 23.485078401618615 22.175012645422356 21.48204350025291 32.85786545270612 15 31.901871522508852 22.13960546282246 17.880627212948912 28.077895801719777 16 31.52250885179565 20.591805766312596 22.129489124936775 25.756196256954983 17 19.02377339403136 34.59281740010116 20.556398583712696 25.827010622154777 18 28.143651997976733 17.06626201315124 23.540718259989884 31.249367728882145 19 27.13707637835104 26.00910470409712 22.964087000505817 23.889731917046028 20 24.69903894790086 18.79615579160344 25.311077389984828 31.193727870510873 21 34.96712190187152 16.777946383409205 23.83409205867476 24.420839656044514 22 24.36519979767324 26.403641881638844 25.03793626707132 24.19322205361659 23 27.59736975214972 22.08396560445119 21.588265048052605 28.730399595346483 24 30.47546788062721 21.664137582195245 27.000505816894282 20.859888720283255 25 20.713201820940817 26.079919069296913 26.226605968639355 26.98027314112291 26 33.034901365705615 22.190187152250886 22.9742033383915 21.800708143652 27 21.289833080424884 26.71724835609509 26.82852807283763 25.164390490642386 28 23.25240263024785 21.583206879109763 27.42539200809307 27.738998482549317 29 26.383409205867476 20.687910976226608 28.376327769347498 24.552352048558422 30 20.18209408194234 22.362164896307537 32.883156297420335 24.572584724329793 31 27.683358624178044 22.81740010116338 23.287809812847748 26.211431461810825 32 22.76176024279211 22.564491654021243 34.14264036418817 20.531107738998482 33 20.480526049570056 26.31259484066768 31.138088012139605 22.06879109762266 34 26.77794638340921 25.97369752149722 23.72281234193222 23.525543753161354 35 20.92058674759737 21.67425392008093 36.393525543753164 21.01163378856854 36 23.464845725847244 26.423874557410215 23.399089529590288 26.712190187152252 37 21.102680829539707 25.776428932726354 27.4759736975215 25.644916540212442 38 21.93727870510875 20.13657056145675 30.69802731411229 27.228123419322202 39 25.91805766312595 21.583206879109763 25.48305513404148 27.015680323722812 40 19.49418310571573 19.438543247344462 35.80677794638341 25.2604957005564 41 21.37076378351037 22.604957005563985 25.230146686899342 30.794132524026303 42 21.340414769853314 19.93930197268589 33.788568538189175 24.931714719271625 43 19.802731411229136 21.45169448659585 32.640364188163886 26.10520991401113 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.0 3 9.5 4 18.0 5 18.0 6 32.5 7 47.0 8 49.5 9 52.0 10 60.0 11 68.0 12 68.0 13 114.5 14 161.0 15 276.0 16 391.0 17 332.5 18 274.0 19 274.0 20 327.0 21 380.0 22 254.5 23 129.0 24 116.5 25 104.0 26 104.0 27 131.5 28 159.0 29 169.0 30 179.0 31 190.5 32 202.0 33 202.0 34 227.0 35 252.0 36 292.5 37 333.0 38 378.0 39 423.0 40 423.0 41 489.5 42 556.0 43 627.5 44 699.0 45 881.0 46 1063.0 47 1063.0 48 1394.0 49 1725.0 50 2337.5 51 2950.0 52 2061.0 53 1172.0 54 1172.0 55 1655.0 56 2138.0 57 1836.0 58 1534.0 59 1206.5 60 879.0 61 879.0 62 852.0 63 825.0 64 780.5 65 736.0 66 690.0 67 644.0 68 644.0 69 578.5 70 513.0 71 478.5 72 444.0 73 391.5 74 339.0 75 339.0 76 257.5 77 176.0 78 148.0 79 120.0 80 88.0 81 56.0 82 56.0 83 36.0 84 16.0 85 12.0 86 8.0 87 5.5 88 3.0 89 3.0 90 2.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 19770.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.46737481031866 #Duplication Level Percentage of deduplicated Percentage of total 1 91.903073286052 62.92362164896308 2 5.319148936170213 7.283763277693475 3 1.2263593380614657 2.5189681335356604 4 0.583628841607565 1.5983813859382905 5 0.20685579196217493 0.7081436519979768 6 0.14036643026004728 0.5766312594840668 7 0.08126477541371158 0.38947900859888723 8 0.08126477541371158 0.4451188669701568 9 0.03693853427895981 0.2276176024279211 >10 0.3250591016548463 4.51188669701568 >50 0.022163120567375887 1.0015174506828528 >100 0.0591016548463357 10.136570561456752 >500 0.014775413711583925 7.678300455235205 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGT 820 4.147698533131006 No Hit TCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTT 698 3.530601922104198 TruSeq Adapter, Index 12 (95% over 22bp) ATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATG 431 2.1800708143652 No Hit ACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCC 382 1.932220536165908 No Hit CATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTC 289 1.4618108244815378 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 233 1.1785533636823469 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 222 1.1229135053110775 No Hit CTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTTC 207 1.0470409711684372 RNA PCR Primer, Index 12 (95% over 23bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 130 0.6575619625695498 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 110 0.556398583712696 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 83 0.4198280222559433 No Hit CACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCG 64 0.32372281234193223 No Hit GTACATGGGCCTCTCTATGGGCATATCAATAAGGCGAGGAATC 51 0.25796661608497723 No Hit CTCTTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTC 47 0.23773394031360648 No Hit GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAAT 45 0.2276176024279211 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAA 42 0.21244309559939303 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATA 39 0.19726858877086492 No Hit CTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATA 39 0.19726858877086492 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCA 35 0.1770359129994942 No Hit ACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATAAGGCG 33 0.1669195751138088 No Hit TATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTAT 33 0.1669195751138088 No Hit GGTATCAACGCAGAGTACATGGGAACAGTGGCTGTCTCTTATA 33 0.1669195751138088 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 30 0.15174506828528073 No Hit TTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTA 29 0.14668689934243803 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC 28 0.14162873039959534 No Hit CCACTGTTCCCATGTACTCTGCGTTGATACCCTGTCTCTTATA 26 0.13151239251390998 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22 0.1112797167425392 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGC 21 0.10622154779969652 No Hit ACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGT 20 0.10116337885685382 No Hit TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT 20 0.10116337885685382 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.005058168942842691 0.0 2 0.0 0.0 0.0 0.015174506828528073 0.0 3 0.0 0.0 0.0 0.035407182599898834 0.0 4 0.0 0.0 0.0 0.04046535154274153 0.0 5 0.0 0.0 0.0 0.04552352048558422 0.0 6 0.0 0.0 0.0 0.05058168942842691 0.0 7 0.0 0.0 0.0 0.0556398583712696 0.0 8 0.0 0.0 0.0 0.0556398583712696 0.0 9 0.0 0.0 0.0 0.09104704097116843 0.0 10 0.0 0.0 0.0 0.14162873039959534 0.0 11 0.0 0.0 0.0 0.15680323722812342 0.0 12 0.0 0.0 0.0 0.15680323722812342 0.0 13 0.0 0.0 0.0 0.16186140617096612 0.0 14 0.0 0.0 0.0 0.17703591299949417 0.0 15 0.0 0.0 0.0 0.18715225088517956 0.0 16 0.0 0.0 0.0 0.19726858877086495 0.0 17 0.0 0.0 0.0 0.19726858877086495 0.0 18 0.0 0.0 0.0 0.20232675771370764 0.0 19 0.0 0.0 0.0 0.2175012645422357 0.0 20 0.0 0.0 0.0 0.2276176024279211 0.0 21 0.0 0.0 0.0 0.24279210925644917 0.0 22 0.0 0.0 0.0 0.278199291856348 0.0 23 0.0 0.0 0.0 0.278199291856348 0.0 24 0.0 0.0 0.0 0.343955488113303 0.0 25 0.0 0.0 0.0 0.36418816388467373 0.0 26 0.0 0.0 0.0 0.37936267071320184 0.0 27 0.0 0.0 0.0 0.3844208396560445 0.0 28 0.0 0.0 0.0 0.4400606980273141 0.0 29 0.0 0.0 0.0 0.5209914011127972 0.0 30 0.0 0.0 0.0 0.6170966110268084 0.0 31 0.0 0.0 0.0 1.031866464339909 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTTC 20 0.0017984885 37.0 37 CTTATAC 95 0.0 29.210527 1 CCGTCTT 90 0.0 28.777777 37 GCCGTCT 90 0.0 28.777777 36 TTATACA 100 0.0 27.749998 2 TATACAC 105 0.0 26.42857 3 TGGGCAG 70 1.7321145E-7 23.785715 6 ATACACA 125 0.0 22.199999 4 CGGTGAT 85 4.5636625E-8 21.764706 14 TACACAT 140 0.0 21.142859 5 CAGTCGG 80 6.2768413E-7 20.8125 10 GGGCAGT 80 6.2768413E-7 20.8125 7 GCAGTCG 80 6.2768413E-7 20.8125 9 GTCGGTG 80 6.2768413E-7 20.8125 12 TCGGTGA 90 8.3548E-8 20.555555 13 TGGGAAG 45 0.0036962363 20.555555 6 GGTATCA 190 0.0 20.447369 1 GGTGATT 75 8.534113E-6 19.733332 15 GTGATTC 75 8.534113E-6 19.733332 16 AGTCGGT 85 1.1237098E-6 19.588236 11 >>END_MODULE