##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630599.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 378067 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.9572403833183 33.0 31.0 34.0 30.0 34.0 2 32.05196697939783 33.0 31.0 34.0 30.0 34.0 3 32.06723411458815 33.0 31.0 34.0 30.0 34.0 4 35.73114024762807 37.0 35.0 37.0 33.0 37.0 5 35.742685820238215 37.0 35.0 37.0 35.0 37.0 6 35.886652365850495 37.0 35.0 37.0 35.0 37.0 7 35.80437858898026 37.0 35.0 37.0 35.0 37.0 8 35.8648705123695 37.0 35.0 37.0 35.0 37.0 9 37.47231046348928 39.0 37.0 39.0 35.0 39.0 10 37.40867359489191 39.0 37.0 39.0 34.0 39.0 11 37.54605929636811 39.0 37.0 39.0 35.0 39.0 12 37.51764105304086 39.0 37.0 39.0 35.0 39.0 13 37.56703970460262 39.0 37.0 39.0 35.0 39.0 14 38.671119140258206 40.0 38.0 41.0 34.0 41.0 15 38.630041765083966 40.0 38.0 41.0 34.0 41.0 16 38.52253172056805 40.0 38.0 41.0 34.0 41.0 17 38.64781903736639 40.0 38.0 41.0 35.0 41.0 18 38.72656698415889 40.0 38.0 41.0 35.0 41.0 19 38.849889040831386 40.0 38.0 41.0 35.0 41.0 20 38.84142493261776 40.0 38.0 41.0 35.0 41.0 21 38.79933715452552 40.0 38.0 41.0 35.0 41.0 22 38.66593222894355 40.0 38.0 41.0 35.0 41.0 23 38.564429056225485 40.0 38.0 41.0 34.0 41.0 24 38.46761288343072 40.0 38.0 41.0 34.0 41.0 25 38.36510988792992 40.0 38.0 41.0 34.0 41.0 26 38.11459873514483 40.0 37.0 41.0 34.0 41.0 27 37.883227047057794 40.0 36.0 41.0 33.0 41.0 28 37.70513956520934 40.0 36.0 41.0 33.0 41.0 29 37.52036014780449 39.0 36.0 41.0 33.0 41.0 30 37.25952013796496 39.0 35.0 41.0 33.0 41.0 31 37.00839269230057 39.0 35.0 41.0 32.0 41.0 32 36.71595775351988 39.0 35.0 41.0 31.0 41.0 33 36.44982503101302 38.0 35.0 41.0 31.0 41.0 34 36.238526504561364 38.0 35.0 41.0 31.0 41.0 35 35.977662689417485 38.0 35.0 41.0 30.0 41.0 36 35.749957018200476 38.0 35.0 41.0 29.0 41.0 37 35.39002875151759 38.0 35.0 40.0 27.0 41.0 38 35.02289805775167 38.0 35.0 40.0 25.0 41.0 39 34.6917160185893 38.0 35.0 40.0 23.0 41.0 40 34.242131685653604 37.0 34.0 40.0 20.0 41.0 41 33.904104298973465 37.0 33.0 40.0 18.0 41.0 42 33.43655754138817 37.0 33.0 40.0 14.0 41.0 43 32.56246115106582 36.0 32.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 6.0 12 2.0 13 5.0 14 6.0 15 2.0 16 6.0 17 12.0 18 23.0 19 42.0 20 89.0 21 210.0 22 355.0 23 579.0 24 964.0 25 1552.0 26 2458.0 27 3575.0 28 5132.0 29 6764.0 30 8606.0 31 10415.0 32 12614.0 33 15599.0 34 19878.0 35 25080.0 36 34583.0 37 60687.0 38 76964.0 39 91855.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.5628208756649 18.92283642846374 13.729577032642363 18.784765663229006 2 18.968595513493643 22.958364522690424 33.74587044095359 24.32716952286235 3 23.064430378742394 27.333779462370426 29.998122025990103 19.603668132897077 4 12.799583142670478 16.50977207743601 31.56213052183872 39.12851425805479 5 11.524147836230087 42.98127051554354 31.044497403899307 14.450084244327064 6 31.115384310188404 31.61423768802884 18.30892407959436 18.961453922188394 7 25.74094009791915 34.62269915120865 21.02748983645756 18.60887091441464 8 33.35599245636355 28.41374676975245 19.411903181182172 18.818357592701823 9 28.859170464494387 10.672975953997572 22.324614420195363 38.14323916131268 10 20.748703272171333 29.513551830760154 27.809621046005073 21.928123851063436 11 30.771265410628274 24.309976803053427 19.1783466951625 25.740411091155803 12 22.14342960374748 31.609476627158678 26.781496401431493 19.465597367662347 13 31.341799204902838 19.285206061359496 29.257777060679718 20.11521767305795 14 23.401936693760632 22.43808637093425 30.162114122629056 23.99786281267606 15 28.23652950402971 24.63663847942296 28.189183398709755 18.93764861783758 16 22.27330076415027 24.455189159593406 30.61467940867624 22.656830667580085 17 20.121301250836492 28.44363565188181 29.5294220336607 21.905641063620997 18 19.268542348313925 22.0058878452761 34.57429503236199 24.151274774047987 19 20.24852737742252 25.62746814718026 35.4974118344103 18.626592640986914 20 21.633467083876667 21.636641124456776 37.396546114842074 19.33334567682448 21 23.429709548836584 23.298515871525417 34.645181938651085 18.626592640986914 22 23.692361406840586 23.748171620374166 33.22559228919742 19.33387468358783 23 21.051824147571725 24.08223939143062 34.21271890961126 20.653217551386394 24 19.415870731907308 26.319144490262307 34.52192336279019 19.74306141504019 25 19.273303409184088 25.68327836071384 34.61635107004843 20.427067160053642 26 20.60058137843292 25.970793536595366 33.988420041950235 19.440205043021475 27 20.28264831365869 26.454570221680285 33.89425683807368 19.36852462658735 28 18.64352085741416 26.29295865547641 35.33844530202319 19.72507518508624 29 19.01250307485181 26.808475746362415 35.69076380641526 18.488257372370505 30 17.299050168356402 27.93631816582775 36.18009506251537 18.58453660330047 31 18.467097101836448 28.796747666418916 33.656732801328864 19.079422430415775 32 17.482351011857684 28.33386674848638 34.72188791933705 19.461894320318883 33 17.15806986592324 27.99318639288803 35.017867203432196 19.830876537756538 34 18.575543488323497 28.181512800641155 34.421412077753416 18.821531633281932 35 17.22181518090709 29.3768035824338 34.12014272602475 19.281238510634356 36 17.488434589636228 29.419388626883595 32.84444291620268 20.247733867277493 37 17.715642994495685 28.593080062528596 33.83342106028825 19.85785588268746 38 17.59264892201647 27.42371061214018 33.723123150129474 21.26051731571388 39 18.204180740450767 28.302919852830318 33.803267674777224 19.68963173194169 40 16.878489791491987 28.261921828670577 33.88473471633335 20.974853663504085 41 16.86447111226317 28.556049589093995 33.418150751057354 21.16132854758548 42 16.81474447650813 28.92979286740181 33.90801101392081 20.347451642169247 43 16.230985513149783 28.209814662480458 33.052607077581484 22.506592746788268 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 40.0 1 84.0 2 128.0 3 549.0 4 970.0 5 970.0 6 1576.0 7 2182.0 8 2303.5 9 2425.0 10 3395.0 11 4365.0 12 4365.0 13 7712.0 14 11059.0 15 16185.0 16 21311.0 17 18842.5 18 16374.0 19 16374.0 20 17077.0 21 17780.0 22 12425.0 23 7070.0 24 6438.0 25 5806.0 26 5806.0 27 6131.5 28 6457.0 29 6864.0 30 7271.0 31 7695.5 32 8120.0 33 8120.0 34 9027.5 35 9935.0 36 10517.0 37 11099.0 38 13093.5 39 15088.0 40 15088.0 41 16640.0 42 18192.0 43 19575.5 44 20959.0 45 22132.0 46 23305.0 47 23305.0 48 25440.5 49 27576.0 50 25867.0 51 24158.0 52 23182.0 53 22206.0 54 22206.0 55 19505.0 56 16804.0 57 16345.0 58 15886.0 59 14775.0 60 13664.0 61 13664.0 62 12837.0 63 12010.0 64 11201.5 65 10393.0 66 9879.5 67 9366.0 68 9366.0 69 7666.0 70 5966.0 71 5119.0 72 4272.0 73 3271.5 74 2271.0 75 2271.0 76 1857.5 77 1444.0 78 1199.5 79 955.0 80 738.5 81 522.0 82 522.0 83 422.0 84 322.0 85 241.0 86 160.0 87 130.5 88 101.0 89 101.0 90 71.5 91 42.0 92 25.5 93 9.0 94 6.0 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 378067.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.00234127514075 #Duplication Level Percentage of deduplicated Percentage of total 1 79.45153721306293 30.98795969218426 2 9.785038826658646 7.632788474156866 3 3.2952346935784056 3.855656043018865 4 1.8026757573683554 2.8123430038921367 5 1.099687493424768 2.1445193457278457 6 0.7437289962124278 1.7404303275896986 7 0.5286535371075854 1.4433107969406234 8 0.4194832392050903 1.3088662763742747 9 0.3140139060569948 1.102254977625741 >10 2.13453858301512 16.159443484187097 >50 0.2378477859559228 6.465804502014503 >100 0.17328910119645805 12.598445804232647 >500 0.009513911438236912 2.4612199469443197 >1k 0.002718260410924832 2.1648981829249623 >5k 0.001359130205462416 4.4384653490770605 >10k+ 6.79565102731208E-4 2.6835937931091145 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10125 2.678096739466814 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9525 2.5193947104613734 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7221 1.9099789190804806 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4635 1.2259731740670303 No Hit CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGT 1236 0.3269261797512081 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1182 0.3126429971407184 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1115 0.2949212705684442 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 985 0.26053583095059873 No Hit TCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTT 900 0.23805304350816128 TruSeq Adapter, Index 11 (95% over 23bp) GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 775 0.20499012079869444 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 718 0.1899134280431775 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 692 0.18303634011960843 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 669 0.17695276234106652 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 634 0.1676951439824158 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 585 0.15473447828030482 No Hit ATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATG 573 0.151560437700196 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 565 0.14944441064679012 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 562 0.1486509005017629 No Hit CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGC 555 0.14679937683003277 No Hit ACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCC 538 0.14230281934154526 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 535 0.14150930919651808 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 485 0.12828414011273134 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 477 0.12616811305932546 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 467 0.12352307924256813 No Hit TCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA 464 0.1227295690975409 No Hit GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG 462 0.12220056233418944 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 449 0.1187620183724049 No Hit CATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTC 417 0.11029791015878138 TruSeq Adapter, Index 11 (95% over 21bp) GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 414 0.10950440001375418 No Hit GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 405 0.10712386957867258 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 392 0.10368532561688801 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 385 0.10183380194515787 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0015870202900544084 0.0 3 0.0 0.0 0.0 0.0021160270534058777 0.0 4 0.0 0.0 0.0 0.002909537198433082 0.0 5 0.0 0.0 0.0 0.003174040580108817 0.0 6 0.0 0.0 0.0 0.003174040580108817 0.0 7 0.0 0.0 0.0 0.003967550725136021 0.0 8 0.0 0.0 0.0 0.0042320541068117555 0.0 9 0.0 0.0 0.0 0.005554571015190429 0.0 10 0.0 0.0 0.0 0.008199604831947777 0.0 11 0.0 0.0 0.0 0.00899311497697498 0.0 12 0.0 0.0 0.0 0.011638148793732327 0.0 13 0.0 0.0 0.0 0.012960665702111001 0.0 14 0.0 0.0 0.0 0.015605699518868348 0.0 15 0.0 0.0 0.0 0.023011794205788923 0.0 16 0.0 0.0 0.0 0.04681709855660505 0.0 17 0.0 0.0 0.0 0.07247392657915132 0.0 18 0.0 0.0 0.0 0.08596359904461379 0.0 19 0.0 0.0 0.0 0.10104029180013066 0.0 20 0.0 0.0 0.0 0.11400095750224166 0.0 21 0.0 0.0 0.0 0.151560437700196 0.0 22 0.0 2.645033816757347E-4 0.0 0.21451224253902085 0.0 23 0.0 2.645033816757347E-4 0.0 0.3139655140490971 0.0 24 0.0 2.645033816757347E-4 0.0 0.454681313100588 0.0 25 0.0 2.645033816757347E-4 0.0 0.48853774595508204 0.0 26 0.0 2.645033816757347E-4 0.0 0.540380408763526 0.0 27 0.0 2.645033816757347E-4 0.0 0.5864039971751038 0.0 28 0.0 2.645033816757347E-4 0.0 0.6419497073270082 0.0 29 0.0 2.645033816757347E-4 0.0 0.7411384754554087 0.0 30 0.0 2.645033816757347E-4 0.0 0.9204717682315569 0.0 31 0.0 2.645033816757347E-4 0.0 1.4481560146746477 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACCGT 25 1.2320589E-4 37.0 6 GTCTGGG 25 0.005491736 29.6 9 TTGTCTG 25 0.005491736 29.6 7 GCTCTCG 25 0.005491736 29.6 14 GCAGCGT 25 0.005491736 29.6 1 CCACACT 25 0.005491736 29.6 32 CAGTATT 40 5.9297512E-5 27.75 14 CCGTCTT 190 0.0 27.263155 37 GAACTAA 35 8.8583416E-4 26.428572 1 TCTAAGA 35 8.8583416E-4 26.428572 30 GCCGTCT 205 0.0 25.268293 36 TAATTGT 45 1.3209188E-4 24.666666 4 ATGCAGG 75 1.3675162E-8 24.666666 36 AGGCACC 55 1.8982835E-5 23.545454 23 TAATCAT 40 0.001928804 23.125 5 AATGCAG 80 2.7135684E-8 23.125 35 GAGAATA 40 0.001928804 23.125 34 ATTAGAG 50 2.6974562E-4 22.2 18 CCAGTAT 50 2.6974562E-4 22.2 13 TTTAATG 85 5.1575626E-8 21.764706 32 >>END_MODULE