##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630597.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1357836 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.061035353312185 33.0 31.0 34.0 30.0 34.0 2 32.219296733920736 33.0 31.0 34.0 30.0 34.0 3 32.308643311857985 34.0 31.0 34.0 30.0 34.0 4 35.902683387389935 37.0 35.0 37.0 35.0 37.0 5 35.87917833965221 37.0 35.0 37.0 35.0 37.0 6 35.98353703981924 37.0 35.0 37.0 35.0 37.0 7 35.930294232882325 37.0 35.0 37.0 35.0 37.0 8 35.94297912266283 37.0 35.0 37.0 35.0 37.0 9 37.63651280419727 39.0 37.0 39.0 35.0 39.0 10 37.55828612586498 39.0 37.0 39.0 35.0 39.0 11 37.67433401382789 39.0 37.0 39.0 35.0 39.0 12 37.62812445685635 39.0 37.0 39.0 35.0 39.0 13 37.670083868744086 39.0 37.0 39.0 35.0 39.0 14 38.89923378081005 40.0 38.0 41.0 36.0 41.0 15 38.90118983441299 40.0 38.0 41.0 36.0 41.0 16 38.84691671159109 40.0 38.0 41.0 35.0 41.0 17 38.88262131803841 40.0 38.0 41.0 36.0 41.0 18 38.91039050371326 40.0 38.0 41.0 36.0 41.0 19 39.00271166768299 40.0 38.0 41.0 36.0 41.0 20 38.974600761800396 40.0 38.0 41.0 35.0 41.0 21 38.93098798382132 40.0 38.0 41.0 35.0 41.0 22 38.82616678302829 40.0 38.0 41.0 35.0 41.0 23 38.75729174951909 40.0 38.0 41.0 35.0 41.0 24 38.71393820755968 40.0 38.0 41.0 35.0 41.0 25 38.641309407027066 40.0 38.0 41.0 35.0 41.0 26 38.498158835087594 40.0 38.0 41.0 34.0 41.0 27 38.33257330045749 40.0 38.0 41.0 34.0 41.0 28 38.227759464324116 40.0 38.0 41.0 34.0 41.0 29 38.13009892210842 40.0 37.0 41.0 34.0 41.0 30 37.99828845309743 40.0 37.0 41.0 33.0 41.0 31 37.897236485113076 40.0 37.0 41.0 33.0 41.0 32 37.726684960481236 40.0 37.0 41.0 33.0 41.0 33 37.60129573821875 40.0 36.0 41.0 33.0 41.0 34 37.49600688153798 40.0 36.0 41.0 33.0 41.0 35 37.36291054295217 40.0 36.0 41.0 33.0 41.0 36 37.28332729431242 40.0 36.0 41.0 33.0 41.0 37 37.09126212591211 40.0 35.0 41.0 32.0 41.0 38 36.88991454048943 40.0 35.0 41.0 31.0 41.0 39 36.75667827337028 39.0 35.0 41.0 31.0 41.0 40 36.51562854424245 39.0 35.0 41.0 30.0 41.0 41 36.3905898797793 39.0 35.0 41.0 30.0 41.0 42 36.16440866201809 39.0 35.0 41.0 29.0 41.0 43 35.35869943056451 38.0 35.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 7.0 12 7.0 13 7.0 14 6.0 15 1.0 16 8.0 17 15.0 18 36.0 19 70.0 20 149.0 21 345.0 22 687.0 23 1115.0 24 1821.0 25 2997.0 26 4900.0 27 7531.0 28 11195.0 29 15714.0 30 20800.0 31 25963.0 32 33275.0 33 42866.0 34 57561.0 35 75889.0 36 108100.0 37 179896.0 38 298883.0 39 467987.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.46940867674741 19.40978144636024 12.656609487449147 22.464200389443203 2 19.275229114561697 21.382773766493155 35.30853505136113 24.033462067584008 3 21.14165480956463 24.9304039663111 29.89499468271573 24.032946541408535 4 13.155344238921343 15.373285139000586 34.7545653525168 36.71680526956127 5 13.06652644354694 39.73432726779965 33.53976474331215 13.659381545341265 6 33.05877882159554 34.61294294745463 16.717777404635022 15.610500826314814 7 27.704818549515554 31.93773032973054 21.33902768817442 19.018423432579485 8 29.616905134346123 31.144630132063078 19.971852270819156 19.266612462771647 9 27.545300021504804 11.920659048662726 21.443826794988496 39.09021413484397 10 17.950989662963714 28.046317817468385 32.25382152189219 21.748870997675713 11 33.69751575300699 22.21063515770682 21.177152469075793 22.914696620210393 12 21.95670169298796 28.550355123888306 28.112231521332475 21.380711661791263 13 30.806813193935056 19.906527739727036 26.76147929499586 22.525179771342046 14 22.5975743756978 21.867073785052096 27.837824302787674 27.69752753646243 15 26.622950046986528 27.17986560969071 25.09721350737497 21.099970835947786 16 23.94626449733252 26.049832233053184 26.349132001213693 23.6547712684006 17 21.887400245685047 27.123010437195656 27.32804256184105 23.661546755278252 18 21.64591305577404 23.943834159648144 30.438801151243595 23.97145163333422 19 22.14008171826347 25.485552010699376 30.266099882460036 22.108266388577118 20 23.78085424160208 23.753384061109 30.87582005485198 21.589941642436937 21 24.463926424104237 24.922229194100023 28.99783184419915 21.61601253759659 22 24.294023725987525 25.05066885838938 29.04017863718446 21.615128778438635 23 23.062578985974742 24.657764266082207 29.23040779593412 23.049248952008934 24 22.25688522030643 25.9837712359961 29.290798005060992 22.468545538636477 25 22.179850880371415 25.423320636660097 29.62964599553996 22.767182487428524 26 22.5066944756215 25.85960307430352 29.126124215295512 22.50757823477946 27 22.55412288376505 25.782642380965004 29.435734506965495 22.22750022830445 28 21.80940849999558 25.46898152648773 29.911270580541387 22.810339392975294 29 21.390948538704233 25.996438450593445 30.924353161942975 21.68825984875935 30 20.610441909037615 26.996485584415204 30.28561623053152 22.10745627601566 31 22.60501268194392 27.212564698535026 28.415213619317797 21.767209000203263 32 20.54865241457731 26.727233627625136 29.846608868817736 22.87750508897982 33 20.688360008130584 25.955122709959085 30.21152775445636 23.144989527453976 34 22.050159223941627 25.40240500325518 30.375244138467384 22.17219163433581 35 20.770696903013324 26.289920137630762 30.48048512486044 22.458897834495474 36 21.173470139250984 27.05879060505098 29.020514995919978 22.747224259778058 37 21.51850444383563 25.912186744201804 29.804262075832426 22.765046736130138 38 21.087450914543435 25.52973996859709 29.799548693656668 23.583260423202802 39 21.10144376787771 25.909314526938452 30.479380425912993 22.50986127927084 40 19.96286738604662 25.611414044111363 30.872358664816662 23.55335990502535 41 20.193307586483197 25.41190541420319 30.876556520816944 23.518230478496665 42 19.8280204678621 26.03186246350811 31.33633222274266 22.803784845887133 43 19.29297794431728 24.737228943701595 31.02392336040582 24.9458697515753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 63.0 1 145.5 2 228.0 3 1157.0 4 2086.0 5 2086.0 6 3168.5 7 4251.0 8 4298.0 9 4345.0 10 5836.0 11 7327.0 12 7327.0 13 12425.0 14 17523.0 15 25152.0 16 32781.0 17 29260.5 18 25740.0 19 25740.0 20 27274.5 21 28809.0 22 22777.0 23 16745.0 24 17952.5 25 19160.0 26 19160.0 27 21126.0 28 23092.0 29 26674.5 30 30257.0 31 34329.0 32 38401.0 33 38401.0 34 44015.0 35 49629.0 36 53975.0 37 58321.0 38 65016.5 39 71712.0 40 71712.0 41 74659.5 42 77607.0 43 80686.5 44 83766.0 45 84188.5 46 84611.0 47 84611.0 48 88243.0 49 91875.0 50 91300.0 51 90725.0 52 93496.0 53 96267.0 54 96267.0 55 90808.5 56 85350.0 57 80780.5 58 76211.0 59 71025.0 60 65839.0 61 65839.0 62 58986.0 63 52133.0 64 46120.5 65 40108.0 66 36087.5 67 32067.0 68 32067.0 69 25909.5 70 19752.0 71 16840.5 72 13929.0 73 10575.0 74 7221.0 75 7221.0 76 5566.5 77 3912.0 78 2957.0 79 2002.0 80 1613.0 81 1224.0 82 1224.0 83 1119.0 84 1014.0 85 944.5 86 875.0 87 686.0 88 497.0 89 497.0 90 399.5 91 302.0 92 184.5 93 67.0 94 38.5 95 10.0 96 10.0 97 6.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1357836.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.82619385926892 #Duplication Level Percentage of deduplicated Percentage of total 1 81.55599279858782 40.636247075675776 2 11.25921405258138 11.220075641738493 3 3.0969224811543747 4.62923579739378 4 1.1687132268253482 2.3293012722276614 5 0.590748208778724 1.4717367386312288 6 0.37174676600219053 1.1113635857628856 7 0.2601249878932114 0.9072726652084994 8 0.19233188831847978 0.7666532762140666 9 0.14767109440758602 0.6622099719626504 >10 1.0951031208331525 11.021225526518421 >50 0.14210182689464212 4.967579893744588 >100 0.10332012602199014 10.14372115750302 >500 0.01230353704808462 4.295848277941062 >1k 0.0031129431085515306 2.330432324638017 >5k 1.4823538612150145E-4 0.5116285722859896 >10k+ 4.447061583645043E-4 2.995468222553861 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16138 1.1885087742555065 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13583 1.0003417202077423 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10835 0.7979608730362134 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6927 0.5101499739291049 No Hit CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGT 2704 0.19914039692569646 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 2359 0.1737323211345111 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 2079 0.153111274115578 No Hit CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGC 1805 0.13293210667562208 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 1782 0.13123823495620973 No Hit TCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA 1681 0.1237999287100946 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1673 0.12321075593812508 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 1590 0.11709808842894134 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1494 0.11002801516530715 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 1405 0.10347346807714629 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1394 0.1026633555156882 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.4729319299237905E-4 0.0 2 0.0 0.0 0.0 0.0013256387369314114 0.0 3 0.0 0.0 0.0 0.0017675183159085487 0.0 4 0.0 0.0 0.0 0.002503984280870444 0.0 5 0.0 0.0 0.0 0.0028722172633513913 0.0 6 0.0 0.0 0.0 0.002945863859847581 0.0 7 0.0 0.0 0.0 0.0033877434388247182 0.0 8 0.0 0.0 0.0 0.0035350366318170974 0.0 9 0.0 0.0 0.0 0.005744434526702783 0.0 10 0.0 0.0 0.0 0.007953832421588468 0.0 11 0.0 0.0 0.0 0.008984884772535121 0.0 12 0.0 0.0 0.0 0.01097334287793224 0.0 13 0.0 0.0 0.0 0.011709808842894135 0.0 14 0.0 0.0 0.0 0.012888154386833167 0.0 15 0.0 0.0 0.0 0.015613078457192179 0.0 16 0.0 0.0 0.0 0.023198677896299702 0.0 17 0.0 0.0 0.0 0.03439296056372051 0.0 18 0.0 0.0 0.0 0.03719153123057571 0.0 19 0.0 0.0 0.0 0.04470348407318704 0.0 20 0.0 0.0 0.0 0.04904863326646222 0.0 21 0.0 0.0 0.0 0.0618631410567992 0.0 22 0.0 0.0 0.0 0.0879340362164503 0.0 23 0.0 0.0 0.0 0.13109094176321737 0.0 24 0.0 0.0 0.0 0.19877216394321554 0.0 25 0.0 0.0 0.0 0.21062926597910203 0.0 26 0.0 0.0 0.0 0.23530087580532552 0.0 27 0.0 0.0 0.0 0.2565847421927243 0.0 28 0.0 0.0 0.0 0.30357127075729323 0.0 29 0.0 0.0 0.0 0.37986914472734556 0.0 30 0.0 0.0 0.0 0.5169991074032505 0.0 31 0.0 0.0 0.0 0.9875272124174054 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTCTAC 45 0.00382616 20.555555 1 CTAAGCG 55 5.143753E-4 20.181818 3 GCCGTCT 215 0.0 19.790697 36 CTTTGCG 75 9.2678E-6 19.733334 9 CCGTCTT 230 0.0 18.5 37 CCAAACG 80 1.6170217E-5 18.5 9 CGCAATT 50 0.007035524 18.499998 12 TTAGACT 135 1.1532393E-9 17.814814 4 GGTATCA 6750 0.0 17.677778 1 GGACTGA 105 4.7988397E-7 17.619047 6 ATTAGAC 95 3.6073616E-6 17.526316 3 CAATACG 75 2.0676141E-4 17.266666 4 GGTATAC 80 3.3831294E-4 16.1875 3 AAGGGCG 80 3.3831294E-4 16.1875 5 TAGTACT 80 3.3831294E-4 16.1875 4 GATCGTT 70 0.0025928176 15.857143 11 AGTACGT 70 0.0025928176 15.857143 23 GTACGTG 70 0.0025928176 15.857143 24 TCTTATA 2540 0.0 15.805119 37 TATGCCG 270 0.0 15.759258 33 >>END_MODULE