##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630590.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1193704 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98436630856561 33.0 31.0 34.0 30.0 34.0 2 32.16685040847647 33.0 31.0 34.0 30.0 34.0 3 32.27469791506102 34.0 31.0 34.0 30.0 34.0 4 35.86768998009557 37.0 35.0 37.0 35.0 37.0 5 35.814796633001144 37.0 35.0 37.0 35.0 37.0 6 35.88193555521302 37.0 35.0 37.0 35.0 37.0 7 35.822343730103945 37.0 35.0 37.0 35.0 37.0 8 35.813060021579886 37.0 35.0 37.0 35.0 37.0 9 37.53821466628243 39.0 37.0 39.0 35.0 39.0 10 37.420747521998756 39.0 37.0 39.0 34.0 39.0 11 37.51854647383271 39.0 37.0 39.0 35.0 39.0 12 37.44896473497617 39.0 37.0 39.0 35.0 39.0 13 37.49718606957839 39.0 37.0 39.0 35.0 39.0 14 38.78223495942043 40.0 38.0 41.0 35.0 41.0 15 38.798478517287364 40.0 38.0 41.0 35.0 41.0 16 38.7650631982468 40.0 38.0 41.0 35.0 41.0 17 38.71401034092204 40.0 38.0 41.0 35.0 41.0 18 38.68995328825236 40.0 38.0 41.0 35.0 41.0 19 38.73286761207133 40.0 38.0 41.0 35.0 41.0 20 38.68925629804374 40.0 38.0 41.0 34.0 41.0 21 38.65335376274185 40.0 38.0 41.0 34.0 41.0 22 38.590073418535916 40.0 38.0 41.0 34.0 41.0 23 38.53027802537312 40.0 38.0 41.0 34.0 41.0 24 38.47898473993553 40.0 38.0 41.0 34.0 41.0 25 38.42382533693445 40.0 38.0 41.0 34.0 41.0 26 38.292489595410586 40.0 38.0 41.0 34.0 41.0 27 38.16940296756985 40.0 38.0 41.0 33.0 41.0 28 38.06411639736484 40.0 38.0 41.0 33.0 41.0 29 37.986616447628556 40.0 37.0 41.0 33.0 41.0 30 37.906720594050114 40.0 37.0 41.0 33.0 41.0 31 37.900387365712106 40.0 37.0 41.0 33.0 41.0 32 37.81739107852533 40.0 37.0 41.0 33.0 41.0 33 37.741390663011934 40.0 37.0 41.0 33.0 41.0 34 37.69353625354359 40.0 37.0 41.0 32.0 41.0 35 37.64584855206986 40.0 37.0 41.0 32.0 41.0 36 37.62982364137173 40.0 37.0 41.0 32.0 41.0 37 37.513899593198985 40.0 37.0 41.0 32.0 41.0 38 37.37915429620743 40.0 36.0 41.0 32.0 41.0 39 37.334428803120375 39.0 36.0 41.0 31.0 41.0 40 37.186162566264336 39.0 36.0 41.0 31.0 41.0 41 37.146294223693644 39.0 36.0 41.0 31.0 41.0 42 37.023525094998426 39.0 35.0 41.0 31.0 41.0 43 36.14734641083552 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 2.0 12 1.0 13 0.0 14 1.0 15 1.0 16 5.0 17 17.0 18 29.0 19 73.0 20 145.0 21 270.0 22 539.0 23 972.0 24 1655.0 25 2788.0 26 4162.0 27 6243.0 28 8945.0 29 12224.0 30 16615.0 31 22367.0 32 28848.0 33 37553.0 34 50297.0 35 68156.0 36 97762.0 37 149091.0 38 287747.0 39 397190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.58944595980243 17.23283158974084 10.932693532064901 27.245028918391828 2 20.835064639140022 19.327488221535656 32.207565694678074 27.629881444646244 3 21.46805238149491 21.10632116504594 27.333995697425827 30.09163075603332 4 15.411693351115519 14.176462506618057 32.19650767694504 38.215336465321386 5 16.49822736624825 34.60187785246594 32.99695736966618 15.90293741161963 6 38.70013001548123 32.33766494876452 14.14672314074511 14.815481895009148 7 32.15671556767842 27.801950902401266 19.757996957369667 20.28333657255065 8 29.0003216877886 31.35894660652892 18.485989826623687 21.154741879058793 9 27.75394905269648 12.703065416552178 17.569430947705627 41.97355458304571 10 18.239194976309033 24.507499346571677 31.265623638690997 25.98768203842829 11 39.39695267838593 19.414444451890922 19.907866606796993 21.280736262926155 12 23.985343100132024 22.843183904887642 27.173821986019988 25.997651008960343 13 32.20790078612453 17.494286690837928 22.878368506765494 27.419444016272042 14 24.33442461447729 18.545384785507967 22.94614075181117 34.17404984820357 15 27.938333121108748 25.636841293989132 19.99482283715226 26.43000274774986 16 28.3251961960419 23.807493314925644 21.45490004222152 26.412410446810934 17 26.301914042342155 24.049010474958614 23.007797577959025 26.6412779047402 18 26.893601763921378 22.6324951579286 23.888836763552774 26.585066314597256 19 27.060393531394716 23.120388303968152 23.246466460697125 26.572751703940007 20 27.31740867082627 22.598567148974954 23.342302614383463 26.74172156581531 21 27.568140845636773 22.86253543592046 22.91799307030889 26.651330648133875 22 27.470796780441383 22.703618317438828 22.81051248885821 27.01507241326158 23 26.766183241406583 22.66700957691354 23.45036960586544 27.11643757581444 24 27.187393189601444 23.265901764591558 22.890683117422743 26.656021928384256 25 27.357535871539344 22.56078558838707 22.963481734165253 27.118196805908333 26 27.148019944642893 23.34523466453995 23.16889279084262 26.337852599974532 27 27.490315857197427 22.61381380978869 22.79560091949093 27.10026941352295 28 26.746245300342466 22.891939710346954 23.5018061428964 26.860008846414186 29 26.45974211362281 23.24638268783551 23.627130343870842 26.66674485467084 30 25.99605932458968 23.603506396895714 23.495020541105667 26.90541373740894 31 26.95400199714502 23.254089791103993 22.73662482491472 27.055283386836265 32 26.557002405956588 22.986938135417155 23.0377044895552 27.418354969071057 33 26.234644434466166 22.8501370524016 23.7465066716707 27.168711841461533 34 27.304088785829656 22.664580163926736 23.130859911669894 26.900471138573717 35 26.83093966343415 23.012740176794246 23.798110754424883 26.358209405346717 36 26.293201664734305 23.538666202006528 23.316165481559917 26.85196665169925 37 26.838311675256175 22.544282334649125 23.82533693444941 26.792069055645285 38 26.020856091627405 22.546376656189473 24.517216998518894 26.91555025366423 39 25.947638610576828 22.544868744680425 24.301920744171085 27.20557190057167 40 25.845016855099757 22.44090662341753 24.674793751214708 27.03928277026801 41 25.178352422376065 22.72171325554744 25.34816001286751 26.75177430920898 42 26.19686287387828 22.408821617419395 25.35519693324308 26.03911857545924 43 25.21320193280746 21.69382024354446 25.5723361905464 27.520641633101672 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 13.5 2 19.0 3 60.0 4 101.0 5 101.0 6 154.0 7 207.0 8 227.0 9 247.0 10 313.5 11 380.0 12 380.0 13 671.0 14 962.0 15 1409.5 16 1857.0 17 1835.0 18 1813.0 19 1813.0 20 2276.5 21 2740.0 22 2807.0 23 2874.0 24 3690.0 25 4506.0 26 4506.0 27 5816.5 28 7127.0 29 9014.5 30 10902.0 31 13776.0 32 16650.0 33 16650.0 34 20454.0 35 24258.0 36 29358.5 37 34459.0 38 40142.0 39 45825.0 40 45825.0 41 49946.5 42 54068.0 43 58562.0 44 63056.0 45 67853.5 46 72651.0 47 72651.0 48 78002.0 49 83353.0 50 86663.0 51 89973.0 52 91566.5 53 93160.0 54 93160.0 55 93766.5 56 94373.0 57 94672.0 58 94971.0 59 93481.0 60 91991.0 61 91991.0 62 87133.0 63 82275.0 64 74305.5 65 66336.0 66 58940.0 67 51544.0 68 51544.0 69 44637.0 70 37730.0 71 32184.0 72 26638.0 73 20839.0 74 15040.0 75 15040.0 76 12078.5 77 9117.0 78 7236.0 79 5355.0 80 4415.0 81 3475.0 82 3475.0 83 2550.0 84 1625.0 85 1360.5 86 1096.0 87 834.5 88 573.0 89 573.0 90 441.0 91 309.0 92 178.5 93 48.0 94 28.0 95 8.0 96 8.0 97 6.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1193704.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.97268102086678 #Duplication Level Percentage of deduplicated Percentage of total 1 84.4796698145218 51.50951960348985 2 8.868655376003511 10.814913906501149 3 2.598345306928929 4.752842387443314 4 1.1624710570203125 2.8351590782275746 5 0.6809679758360352 2.0760221588037946 6 0.42859735802618526 1.56796379983901 7 0.3097228163157908 1.3219241338875058 8 0.22739187223450918 1.1091753673993938 9 0.15939721567058246 0.8746988028027058 >10 0.9353206595138384 10.37155704587374 >50 0.08069268485706971 3.4186155168621166 >100 0.06477133885487306 7.647738527113226 >500 0.003720901856787715 1.49879265126657 >1k 2.7562235976205294E-4 0.20107702049004328 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 1273 0.10664285283453853 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.5131858484180334E-4 0.0 2 0.0 0.0 0.0 0.001675457232278689 0.0 3 0.0 0.0 0.0 0.0029320501564877055 0.0 4 0.0 0.0 8.377286161393444E-5 0.005947873174589346 0.0 5 0.0 0.0 8.377286161393444E-5 0.0068693746523426245 0.0 6 0.0 0.0 8.377286161393444E-5 0.0070369203755704934 0.0 7 0.0 0.0 8.377286161393444E-5 0.008209740438165575 0.0 8 0.0 0.0 8.377286161393444E-5 0.009466333362374593 0.0 9 0.0 0.0 8.377286161393444E-5 0.016335708014717218 0.0 10 0.0 0.0 8.377286161393444E-5 0.02546694993063607 0.0 11 0.0 0.0 8.377286161393444E-5 0.027980135779054102 0.0 12 0.0 0.0 8.377286161393444E-5 0.028901637256807382 0.0 13 0.0 0.0 8.377286161393444E-5 0.030242003042630333 0.0 14 0.0 0.0 8.377286161393444E-5 0.031749914551681156 0.0 15 0.0 0.0 8.377286161393444E-5 0.03417932753848525 0.0 16 0.0 0.0 8.377286161393444E-5 0.03644119480206148 0.0 17 0.0 0.0 8.377286161393444E-5 0.040294746436302466 0.0 18 0.0 0.0 8.377286161393444E-5 0.0425566136998787 0.0 19 0.0 0.0 8.377286161393444E-5 0.04456716237861312 0.0 20 0.0 0.0 8.377286161393444E-5 0.04808562256639837 0.0 21 0.0 0.0 8.377286161393444E-5 0.05210671992386722 0.0 22 0.0 0.0 8.377286161393444E-5 0.057300637343931156 0.0 23 0.0 0.0 8.377286161393444E-5 0.06400246627304591 0.0 24 0.0 0.0 8.377286161393444E-5 0.07338502677380657 0.0 25 0.0 0.0 8.377286161393444E-5 0.07723857840804756 0.0 26 0.0 0.0 8.377286161393444E-5 0.08251626868972542 0.0 27 0.0 0.0 8.377286161393444E-5 0.09055846340466313 0.0 28 0.0 0.0 8.377286161393444E-5 0.11074772305362134 0.0 29 0.0 0.0 8.377286161393444E-5 0.13747126590846642 0.0 30 0.0 0.0 8.377286161393444E-5 0.18019542533157298 0.0 31 0.0 0.0 8.377286161393444E-5 0.3273843431872558 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTACCG 35 8.8695966E-4 26.42857 9 CGTCTAT 45 0.003825893 20.555555 1 CAAGACG 225 0.0 18.911112 4 CTAGACT 90 2.1523574E-6 18.5 4 ACTTACC 60 9.2371006E-4 18.5 8 ATAACGA 170 0.0 18.5 12 CGAACGA 155 2.0008883E-11 17.903225 16 TATACTG 115 6.405571E-8 17.695652 5 GGTATCA 680 0.0 17.683825 1 AAGACCG 85 2.7232572E-5 17.411764 5 CGTATAT 75 2.0673509E-4 17.266666 10 TAACGAA 165 5.4569682E-11 16.818182 13 AGTCGGT 210 0.0 16.738096 11 TCTATGG 325 0.0 16.507692 2 TCGTTTA 170 8.54925E-11 16.32353 30 ATGCGGC 230 0.0 16.086956 35 TACGACG 220 0.0 15.977273 5 TATACAG 105 9.343619E-6 15.857144 5 ACGAACG 175 1.3096724E-10 15.857143 15 CGCCTTA 180 2.0190782E-10 15.416666 25 >>END_MODULE