##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630589.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2039563 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05988243560017 33.0 31.0 34.0 30.0 34.0 2 32.2205428319694 33.0 31.0 34.0 30.0 34.0 3 32.32679892702505 34.0 31.0 34.0 30.0 34.0 4 35.91139229334912 37.0 35.0 37.0 35.0 37.0 5 35.87776401121221 37.0 35.0 37.0 35.0 37.0 6 35.95486827325265 37.0 35.0 37.0 35.0 37.0 7 35.89415428697226 37.0 35.0 37.0 35.0 37.0 8 35.90207510138201 37.0 35.0 37.0 35.0 37.0 9 37.62040986230874 39.0 37.0 39.0 35.0 39.0 10 37.52472563975714 39.0 37.0 39.0 35.0 39.0 11 37.626439585342546 39.0 37.0 39.0 35.0 39.0 12 37.564934743373946 39.0 37.0 39.0 35.0 39.0 13 37.613630468879855 39.0 37.0 39.0 35.0 39.0 14 38.907264448315644 40.0 38.0 41.0 36.0 41.0 15 38.90738751389391 40.0 38.0 41.0 36.0 41.0 16 38.87666965913777 40.0 38.0 41.0 35.0 41.0 17 38.858719245250086 40.0 38.0 41.0 35.0 41.0 18 38.84994040390025 40.0 38.0 41.0 35.0 41.0 19 38.91904981606354 40.0 38.0 41.0 35.0 41.0 20 38.897870769375594 40.0 38.0 41.0 35.0 41.0 21 38.850509153186245 40.0 38.0 41.0 35.0 41.0 22 38.783599231796224 40.0 38.0 41.0 35.0 41.0 23 38.733800819097034 40.0 38.0 41.0 35.0 41.0 24 38.67807368539241 40.0 38.0 41.0 34.0 41.0 25 38.63035807180264 40.0 38.0 41.0 34.0 41.0 26 38.48915331372456 40.0 38.0 41.0 34.0 41.0 27 38.36445307156484 40.0 38.0 41.0 34.0 41.0 28 38.263483403062324 40.0 38.0 41.0 34.0 41.0 29 38.180452871521986 40.0 38.0 41.0 34.0 41.0 30 38.085915463263454 40.0 37.0 41.0 33.0 41.0 31 38.00866754299818 40.0 37.0 41.0 33.0 41.0 32 37.9059764273033 40.0 37.0 41.0 33.0 41.0 33 37.82198980860116 40.0 37.0 41.0 33.0 41.0 34 37.73240591244301 40.0 37.0 41.0 33.0 41.0 35 37.66766263165198 40.0 37.0 41.0 33.0 41.0 36 37.606167105404445 40.0 37.0 41.0 33.0 41.0 37 37.4544870641407 40.0 36.0 41.0 32.0 41.0 38 37.3103061783333 40.0 36.0 41.0 32.0 41.0 39 37.20892906960952 40.0 36.0 41.0 32.0 41.0 40 37.01099941507078 40.0 36.0 41.0 31.0 41.0 41 36.930155626474885 39.0 35.0 41.0 31.0 41.0 42 36.77241889561636 39.0 35.0 41.0 31.0 41.0 43 35.996256551035685 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 7.0 11 7.0 12 5.0 13 0.0 14 1.0 15 6.0 16 9.0 17 24.0 18 44.0 19 105.0 20 241.0 21 457.0 22 886.0 23 1468.0 24 2602.0 25 4302.0 26 6772.0 27 10221.0 28 15066.0 29 20762.0 30 28440.0 31 37729.0 32 48658.0 33 63087.0 34 82962.0 35 110673.0 36 158817.0 37 254654.0 38 445068.0 39 746485.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.317550867514264 19.16964565448579 11.62582376715012 23.886979710849822 2 18.737200076683095 21.295885442126572 34.91522448681409 25.051689994376247 3 20.931395597978586 23.530089533885445 28.497133944869564 27.041380923266406 4 13.54554872784023 15.437767796336765 34.606923149713936 36.40976032610907 5 14.414803563312336 37.4484632247202 33.55767877726748 14.579054434699982 6 35.13571289536043 34.24253136578767 16.05976378273189 14.561991956120012 7 29.769465321738036 30.439657907110494 21.102265534332602 18.68861123681887 8 27.82336216140418 32.58286211310952 20.234726752740663 19.359048972745633 9 26.887573465492366 13.00724714068651 20.360881227988546 39.74429816583258 10 17.052966738463095 26.898605240436307 32.87920010315935 23.169227917941246 11 35.261229979167105 22.117532039951694 21.062305993980083 21.558931986901115 12 21.847866430210786 25.745809273849353 29.252344742476698 23.15397955346317 13 30.06869608832873 20.02291667381689 25.894615660315466 24.013771577538915 14 23.07175605754762 21.30961387316793 25.968651127717063 29.649978941567383 15 25.335280155601957 27.641068209219327 23.956357317719533 23.06729431745918 16 25.569644085522242 25.94501861428159 24.73990751940489 23.745429780791277 17 23.269151283877967 26.30970457887302 25.90456877282045 24.516575364428554 18 22.652597639788524 24.474017228200353 28.428246639108472 24.445138492902647 19 24.288585348920332 25.640100354830913 27.63469429480727 22.436620001441483 20 24.6738639600738 24.796046996341865 27.69848246903871 22.831606574545628 21 24.59379778903618 25.263107832413116 26.81314575720387 23.329948621346826 22 25.112683452288554 24.370171453394672 27.051579186325696 23.465565907991074 23 22.926675959507012 25.04428644763609 27.689411898529244 24.33962569432766 24 23.34652079881818 26.082842255914624 27.070798989783597 23.499837955483603 25 23.560488202619876 25.593129508625132 27.22347875500781 23.62290353374718 26 24.254068150873493 25.840829628699876 26.47743658813187 23.42766563229476 27 24.238525605730246 25.204222669267878 26.3061253807801 24.251126344221777 28 23.27459362618365 25.51183758481596 27.688039055425108 23.525529733575283 29 23.285478310795007 26.22453927630576 27.891317895058894 22.59866451784034 30 23.213698228493065 25.977133336896184 27.02971175688125 23.779456677729492 31 22.87661621631693 25.714430002897682 27.248484111547423 24.16046966923797 32 22.202550252186377 26.18855117493306 27.274911341302033 24.33398723157853 33 22.840677145055093 25.240652041638334 27.61684733445351 24.30182347885307 34 23.899335298787044 25.52924327417197 27.664945873209113 22.906475553831875 35 23.721306966247184 25.529096183839386 26.993772685619422 23.75582416429402 36 22.43691418210666 26.079115967489113 26.525437066665752 24.958532783738477 37 22.721828156325643 25.37519066584362 28.22187890249039 23.681102275340354 38 22.35272948175663 24.70749861612512 27.821400956969704 25.118370945148545 39 22.427745551375466 25.253694051127617 28.65800173860773 23.660558658889183 40 22.848129721906112 24.934949300413862 28.286892829493375 23.930028148186647 41 21.574964833152986 25.501394171202364 28.83544170981725 24.088199285827404 42 21.761083133985075 26.019103111794045 28.59048727595078 23.629326478270098 43 22.014666867363253 24.317120873442008 28.19829541916577 25.469916840028965 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 344.0 1 397.0 2 450.0 3 1330.0 4 2210.0 5 2210.0 6 3137.5 7 4065.0 8 4001.5 9 3938.0 10 5358.5 11 6779.0 12 6779.0 13 11286.0 14 15793.0 15 20894.0 16 25995.0 17 25007.0 18 24019.0 19 24019.0 20 26429.0 21 28839.0 22 26381.0 23 23923.0 24 26681.5 25 29440.0 26 29440.0 27 32436.0 28 35432.0 29 40289.0 30 45146.0 31 50621.5 32 56097.0 33 56097.0 34 69422.5 35 82748.0 36 88777.5 37 94807.0 38 97909.5 39 101012.0 40 101012.0 41 102954.5 42 104897.0 43 111993.0 44 119089.0 45 118662.0 46 118235.0 47 118235.0 48 120145.0 49 122055.0 50 126610.0 51 131165.0 52 138900.0 53 146635.0 54 146635.0 55 146140.5 56 145646.0 57 134190.0 58 122734.0 59 120291.0 60 117848.0 61 117848.0 62 107707.5 63 97567.0 64 80951.5 65 64336.0 66 57420.5 67 50505.0 68 50505.0 69 44694.0 70 38883.0 71 37732.5 72 36582.0 73 30748.0 74 24914.0 75 24914.0 76 15764.0 77 6614.0 78 5268.0 79 3922.0 80 3265.5 81 2609.0 82 2609.0 83 2096.5 84 1584.0 85 1364.5 86 1145.0 87 1084.5 88 1024.0 89 1024.0 90 741.0 91 458.0 92 259.5 93 61.0 94 37.5 95 14.0 96 14.0 97 8.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2039563.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.84202885611986 #Duplication Level Percentage of deduplicated Percentage of total 1 87.89855816571416 48.20535263335427 2 7.794846753750191 8.549704211964006 3 1.7167301510879358 2.8244689345240683 4 0.6862717369096449 1.50546137594953 5 0.35448218177173985 0.9720261020853043 6 0.24439717746780487 0.8041942235426163 7 0.16982465011075315 0.6519469853298069 8 0.11842475708321741 0.5195723156189436 9 0.0924382193054326 0.4562549541501183 >10 0.7143943146364259 7.836253396373961 >50 0.09407374794435149 3.627006139491536 >100 0.09418966303998275 10.804161016001903 >500 0.013557313688846823 5.065916780851402 >1k 0.007452033352147591 6.403694209984715 >5k 1.7956706872644798E-4 0.7451847183372061 >10k+ 1.7956706872644798E-4 1.028802002440702 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10573 0.5183953621437534 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10321 0.5060397742065335 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9100 0.4461740088440514 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6034 0.29584768894120944 No Hit GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG 4230 0.20739736894619093 No Hit GTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAG 3243 0.15900464952541304 No Hit GTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTC 3139 0.15390551799576674 No Hit GCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCT 3138 0.15385648788490477 No Hit GCCCAGGGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTGG 2896 0.14199120105630472 No Hit GTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAA 2665 0.1306652454471865 No Hit GGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAAC 2524 0.12375199981564679 No Hit AGCTAACAGGATGTGAAAGTCTTCCAGAAGAAATTCTTGCAGC 2456 0.12041795227703189 No Hit GCCCTGGGCTGTGTCACCGGCGCTCCCTCGGACCCCAGACTCC 2232 0.10943520744394755 No Hit GGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTC 2047 0.10036463693448058 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.903011086198367E-5 0.0 2 0.0 0.0 0.0 8.335118846537223E-4 0.0 3 0.0 0.0 0.0 0.0012257527715495917 0.0 4 0.0 0.0 0.0 0.0021573248779272816 0.0 5 0.0 0.0 0.0 0.0025985958756851346 0.0 6 0.0 0.0 0.0 0.002647625986547118 0.0 7 0.0 0.0 0.0 0.0029908367625810037 0.0 8 0.0 0.0 0.0 0.003285017427752906 0.0 9 0.0 0.0 0.0 0.005442342305680187 0.0 10 0.0 0.0 0.0 0.008335118846537225 0.0 11 0.0 0.0 0.0 0.0096099017289488 0.0 12 0.0 0.0 0.0 0.010982744833084342 0.0 13 0.0 0.0 0.0 0.011669166385152113 0.0 14 0.0 0.0 0.0 0.013042009489287656 0.0 15 0.0 0.0 0.0 0.01456194292600915 0.0 16 0.0 0.0 0.0 0.018925622792725697 0.0 17 0.0 0.0 0.0 0.025446627537369523 0.0 18 0.0 4.903011086198367E-5 0.0 0.02843746429995053 0.0 19 0.0 4.903011086198367E-5 0.0 0.03397786682735468 0.0 20 0.0 4.903011086198367E-5 0.0 0.036919673479073704 0.0 21 0.0 4.903011086198367E-5 0.0 0.04368582877802745 0.0 22 0.0 4.903011086198367E-5 0.0 0.05594335649352337 0.0 23 0.0 9.806022172396734E-5 0.0 0.07810496660313998 0.0 24 0.0 9.806022172396734E-5 0.0 0.10919005688963764 0.0 25 0.0 9.806022172396734E-5 0.0 0.11777032629048477 0.0 26 0.0 9.806022172396734E-5 0.0 0.13233226921649394 0.0 27 0.0 9.806022172396734E-5 0.0 0.15155207267439152 0.0 28 0.0 9.806022172396734E-5 0.0 0.19180579369208012 0.0 29 0.0 9.806022172396734E-5 0.0 0.2482884814050853 0.0 30 0.0 9.806022172396734E-5 0.0 0.32953137510339225 0.0 31 0.0 9.806022172396734E-5 0.0 0.6501392700299035 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTAAG 50 0.007036706 18.499998 2 TATAGAC 100 2.8776412E-7 18.499998 3 AAGACGG 295 0.0 18.186441 5 ACCGTCC 75 2.0682564E-4 17.266666 8 CGCAAGC 65 0.0015805009 17.076925 12 ACTAGAC 90 4.4486747E-5 16.444445 3 AGTCGGT 290 0.0 15.948276 11 GGTATCA 5305 0.0 15.274269 1 TACCGTC 185 3.0559022E-10 15.0 7 TAATACT 460 0.0 14.880435 4 CCGTCCA 100 1.0940236E-4 14.799999 9 CCGGTCC 275 0.0 14.799999 9 GCAGTCG 340 0.0 14.691175 9 CGGACCA 315 0.0 14.682539 9 TAGTTCG 140 6.0009006E-7 14.535715 7 CGGTCCA 280 0.0 14.535715 10 CCGGTCG 235 3.6379788E-12 14.170212 20 CTTATAC 1630 0.0 14.073619 37 CAGTCGG 335 0.0 13.80597 10 CGCCTTA 295 0.0 13.79661 25 >>END_MODULE