##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630569.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1902141 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01500572249901 33.0 31.0 34.0 30.0 34.0 2 32.172760589251794 33.0 31.0 34.0 30.0 34.0 3 32.280144847306275 34.0 31.0 34.0 30.0 34.0 4 35.85760203896557 37.0 35.0 37.0 35.0 37.0 5 35.83404647710133 37.0 35.0 37.0 35.0 37.0 6 35.87334219702956 37.0 35.0 37.0 35.0 37.0 7 35.84707810830007 37.0 35.0 37.0 35.0 37.0 8 35.84666541544502 37.0 35.0 37.0 35.0 37.0 9 37.566860185443666 39.0 37.0 39.0 35.0 39.0 10 37.48337268372849 39.0 37.0 39.0 35.0 39.0 11 37.5872293378882 39.0 37.0 39.0 35.0 39.0 12 37.520493486024435 39.0 37.0 39.0 35.0 39.0 13 37.57044667035724 39.0 37.0 39.0 35.0 39.0 14 38.84589049917961 40.0 38.0 41.0 35.0 41.0 15 38.81916797966081 40.0 38.0 41.0 35.0 41.0 16 38.7951234950511 40.0 38.0 41.0 35.0 41.0 17 38.792960669056605 40.0 38.0 41.0 35.0 41.0 18 38.78792108471454 40.0 38.0 41.0 35.0 41.0 19 38.80961295718877 40.0 38.0 41.0 35.0 41.0 20 38.79276720285194 40.0 38.0 41.0 35.0 41.0 21 38.722649372470286 40.0 38.0 41.0 34.0 41.0 22 38.66764661505115 40.0 38.0 41.0 34.0 41.0 23 38.65232440707603 40.0 38.0 41.0 34.0 41.0 24 38.60167306209161 40.0 38.0 41.0 34.0 41.0 25 38.558442828370765 40.0 38.0 41.0 34.0 41.0 26 38.367476438392316 40.0 38.0 41.0 34.0 41.0 27 38.25089254687218 40.0 38.0 41.0 34.0 41.0 28 38.156620355693924 40.0 38.0 41.0 33.0 41.0 29 38.06347268683026 40.0 37.0 41.0 33.0 41.0 30 37.98217219438517 40.0 37.0 41.0 33.0 41.0 31 37.922606158008264 40.0 37.0 41.0 33.0 41.0 32 37.8380267288282 40.0 37.0 41.0 33.0 41.0 33 37.79012228851594 40.0 37.0 41.0 33.0 41.0 34 37.71580340258687 40.0 37.0 41.0 33.0 41.0 35 37.65450983917596 40.0 37.0 41.0 33.0 41.0 36 37.600801412723875 40.0 37.0 41.0 33.0 41.0 37 37.41709526265403 40.0 36.0 41.0 32.0 41.0 38 37.305476302755686 40.0 36.0 41.0 32.0 41.0 39 37.23306106119367 40.0 36.0 41.0 31.0 41.0 40 37.112434356864185 40.0 36.0 41.0 31.0 41.0 41 36.99120307064513 39.0 36.0 41.0 31.0 41.0 42 36.8917525041519 39.0 35.0 41.0 31.0 41.0 43 36.053394569592896 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 6.0 10 1.0 11 4.0 12 3.0 13 1.0 14 2.0 15 3.0 16 4.0 17 30.0 18 63.0 19 121.0 20 214.0 21 495.0 22 890.0 23 1623.0 24 2637.0 25 4326.0 26 6645.0 27 9748.0 28 14163.0 29 19772.0 30 27227.0 31 35715.0 32 46635.0 33 60413.0 34 80392.0 35 108116.0 36 151113.0 37 233535.0 38 419308.0 39 678933.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.666899562124996 19.629827652103604 12.098577339955344 24.60469544581606 2 19.105260861313646 21.128086719123345 33.88071651891211 25.885935900650896 3 21.106321771098987 23.498047726220086 28.938969298280202 26.456661204400728 4 14.575102476630281 15.324889164367942 34.43661642328303 35.66339193571875 5 14.509019047483863 37.024910351020246 33.91820059606518 14.547870005430722 6 35.02921181973366 34.19567739720662 15.474667755965516 15.300443027094207 7 28.884451783542858 30.332188833530218 21.548770569584484 19.234588813342437 8 27.943459501687833 31.929441613424032 20.223632212333364 19.903466672554767 9 26.577419865299156 13.883881373673141 20.691841456548175 38.846857304479535 10 17.94519964608302 26.65580522158978 32.45753075087494 22.94146438145227 11 35.042670338318764 22.090107936267607 21.505398390550436 21.36182333486319 12 22.488711404675048 25.8262662967677 28.24454128269145 23.440481015865807 13 30.13993179264839 20.08930988817338 25.30006976349282 24.47068855568541 14 22.866653944160817 21.498931992948997 25.5375390152465 30.096875047643685 15 25.811756331418124 27.897511278080856 22.758670361450598 23.532062029050422 16 24.99835711443053 26.413289025366677 24.699693660985176 23.888660199217618 17 23.43049227160342 26.623368088906137 25.78578559633592 24.16035404315453 18 23.1528577534473 25.014969973309025 27.7411611442054 24.09101112903828 19 24.166399862050184 25.395488557367724 27.650473860770575 22.787637719811517 20 24.742697833651658 24.843268716672423 26.906995853619687 23.507037596056232 21 24.713888192305408 25.22830852181831 26.81630857018486 23.241494715691424 22 24.561270694443788 25.319574100973586 26.957570442990292 23.161584761592334 23 23.89607289890707 25.10602526311141 26.79901227090947 24.19888956707205 24 23.654660721786662 25.96963106310205 26.95646642388761 23.41924179122368 25 24.018408729952196 25.71823014171925 26.5549714768779 23.708389651450652 26 23.650928085772822 26.260671527505057 26.82377384221254 23.264626544509582 27 23.983342980357396 25.400903508204703 26.6772547355848 23.938498775853105 28 23.192234434776392 25.829262920046407 27.16828037458842 23.810222270588774 29 23.328186501421293 26.249631336478213 27.267747238506505 23.154434923593993 30 23.52743566328679 26.046281532231312 26.849271426250738 23.577011378231163 31 22.937363739070868 26.72930135042565 26.883390873757516 23.44994403674596 32 22.938835764541114 25.832522405016245 26.920296655190125 24.30834517525252 33 22.472781986193453 26.10043104060109 27.387244163287576 24.039542809917876 34 23.933767265413028 25.386025536487566 26.99521223715802 23.68499496094138 35 23.287810945665964 25.462097709896376 27.329362018903964 23.920729325533703 36 22.652579382916407 26.277126669368883 27.236256407910876 23.83403753980383 37 23.173255820677856 24.967181717864236 27.894094076096355 23.96546838536155 38 23.026631569373667 25.10413265893538 27.907132015975684 23.96210375571527 39 22.957236082919195 24.898206810115546 28.13477024048165 24.00978686648361 40 22.20939457169579 24.85735810331621 28.62895021977866 24.30429710520934 41 21.524377004648972 25.003561775914612 29.03486124319911 24.437199976237302 42 21.934493815127272 24.98184940022848 29.27401280977593 23.80964397486832 43 22.040689938337906 24.559903813649985 28.925983930739097 24.473422317273013 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 642.0 1 571.0 2 500.0 3 1025.5 4 1551.0 5 1551.0 6 2118.0 7 2685.0 8 2517.0 9 2349.0 10 3497.5 11 4646.0 12 4646.0 13 8156.0 14 11666.0 15 14996.5 16 18327.0 17 18544.5 18 18762.0 19 18762.0 20 22552.0 21 26342.0 22 24986.5 23 23631.0 24 26926.0 25 30221.0 26 30221.0 27 33827.5 28 37434.0 29 42185.5 30 46937.0 31 52858.0 32 58779.0 33 58779.0 34 66321.5 35 73864.0 36 80689.0 37 87514.0 38 93490.5 39 99467.0 40 99467.0 41 103247.0 42 107027.0 43 108702.0 44 110377.0 45 111550.0 46 112723.0 47 112723.0 48 117977.5 49 123232.0 50 124315.0 51 125398.0 52 122304.5 53 119211.0 54 119211.0 55 117391.0 56 115571.0 57 112380.5 58 109190.0 59 108396.5 60 107603.0 61 107603.0 62 99204.5 63 90806.0 64 82626.5 65 74447.0 66 64464.0 67 54481.0 68 54481.0 69 48523.5 70 42566.0 71 35973.0 72 29380.0 73 22098.5 74 14817.0 75 14817.0 76 11091.0 77 7365.0 78 6015.0 79 4665.0 80 3953.5 81 3242.0 82 3242.0 83 2537.0 84 1832.0 85 1581.5 86 1331.0 87 1159.0 88 987.0 89 987.0 90 734.5 91 482.0 92 273.5 93 65.0 94 40.5 95 16.0 96 16.0 97 12.0 98 8.0 99 5.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1902141.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.43193434820382 #Duplication Level Percentage of deduplicated Percentage of total 1 85.20091291613738 48.932532370066326 2 9.47965577202836 10.888699358854081 3 2.280063438123402 3.9284536106412937 4 0.8847992877490404 2.0326293842136156 5 0.47466635356472175 1.36305034276152 6 0.2908117109291848 1.002112745386426 7 0.1957016502097712 0.7867667028677909 8 0.13778393490050728 0.6330558322754498 9 0.10037746314358635 0.518838468597153 >10 0.7488984956290513 8.530309503640886 >50 0.0991795563898818 3.9626257975746504 >100 0.09670990575554612 11.461862447805334 >500 0.008150148018652308 3.117246801770345 >1k 0.00201464333045338 1.7504568052390275 >5k 2.7472409051636996E-4 1.0913598283061943 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8323 0.43755957103074905 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6472 0.3402481729798159 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5956 0.3131208464567033 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4321 0.22716507346195683 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 2370 0.12459644158871502 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 2010 0.1056703998284039 No Hit GGCCTAGGTATGGGAAAAGACACAAAGAGGACACGCTGGCCTT 1966 0.10335721694658807 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.257233822308651E-5 0.0 2 0.0 0.0 0.0 0.0014720254702464224 0.0 3 0.0 0.0 0.0 0.0021028935289234604 0.0 4 0.0 0.0 0.0 0.004048070043177661 0.0 5 1.0514467644617302E-4 0.0 0.0 0.0046789381018547 0.0 6 1.0514467644617302E-4 0.0 0.0 0.004731510440077786 0.0 7 1.0514467644617302E-4 0.0 0.0 0.0053098061605317375 0.0 8 1.0514467644617302E-4 0.0 0.0 0.005940674219208776 0.0 9 1.0514467644617302E-4 0.0 0.0 0.009147586850817053 0.0 10 1.5771701466925952E-4 0.0 0.0 0.013195656893994715 0.0 11 2.1028935289234605E-4 0.0 0.0 0.014299675996679532 0.0 12 2.1028935289234605E-4 0.0 0.0 0.015876846143372127 0.0 13 2.1028935289234605E-4 0.0 0.0 0.016980865246056943 0.0 14 2.6286169111543255E-4 0.0 0.0 0.017979739672295585 0.0 15 3.1543402933851904E-4 0.0 0.0 0.019241475789649663 0.0 16 3.1543402933851904E-4 0.0 0.0 0.021081507627457693 0.0 17 5.257233822308651E-4 0.0 0.0 0.02392041389150436 0.0 18 5.257233822308651E-4 0.0 0.0 0.025707873391089302 0.0 19 5.257233822308651E-4 0.0 0.0 0.028546779655135975 0.0 20 5.257233822308651E-4 0.0 0.0 0.03091253487517487 0.0 21 5.257233822308651E-4 0.0 0.0 0.03459259855079092 0.0 22 5.257233822308651E-4 0.0 0.0 0.039849832373099574 0.0 23 5.257233822308651E-4 0.0 0.0 0.0463688023127623 0.0 24 5.257233822308651E-4 0.0 0.0 0.056410118913371825 0.0 25 5.257233822308651E-4 0.0 0.0 0.06219307611791134 0.0 26 5.257233822308651E-4 0.0 0.0 0.07128809063050531 0.0 27 5.257233822308651E-4 0.0 0.0 0.09373647905176324 0.0 28 5.257233822308651E-4 0.0 0.0 0.13768695380626358 0.0 29 5.257233822308651E-4 0.0 0.0 0.20172006176198296 0.0 30 5.257233822308651E-4 0.0 0.0 0.2806837137730589 0.0 31 5.257233822308651E-4 0.0 0.0 0.5492232174165848 5.257233822308651E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGTCT 315 0.0 19.968254 36 GGTATCA 3395 0.0 19.5081 1 GCTTTAT 760 0.0 17.526316 1 AAGACGG 325 0.0 17.076923 5 CGAATTA 80 3.3840217E-4 16.1875 15 ACGTTCG 195 1.8189894E-12 16.128206 7 TATTGAG 780 0.0 15.653847 5 TGCGCTA 85 5.3664454E-4 15.235294 5 TATACTG 235 0.0 14.957447 5 ATGCCGT 425 0.0 14.8 34 GTATAGA 215 1.2732926E-11 14.627907 1 ATGCGTT 130 4.44736E-6 14.230768 36 TGCCGTC 445 0.0 14.134832 35 CGTTCGA 210 1.364242E-10 14.095238 8 CGGACCA 355 0.0 14.070422 9 CCGTCTT 530 0.0 13.962264 37 AGACGTT 240 5.456968E-12 13.875001 5 CTAGTAC 80 0.0063006203 13.875001 3 AATGCGT 135 6.5719105E-6 13.703704 35 CAGTCGG 405 0.0 13.703704 10 >>END_MODULE