##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630562.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1611845 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.996870666844515 33.0 31.0 34.0 30.0 34.0 2 32.14555617940931 33.0 31.0 34.0 30.0 34.0 3 32.25502638280976 34.0 31.0 34.0 30.0 34.0 4 35.835590891183706 37.0 35.0 37.0 35.0 37.0 5 35.81310299687625 37.0 35.0 37.0 35.0 37.0 6 35.85672443690305 37.0 35.0 37.0 35.0 37.0 7 35.8329101123247 37.0 35.0 37.0 35.0 37.0 8 35.82929562085685 37.0 35.0 37.0 35.0 37.0 9 37.548390819216486 39.0 37.0 39.0 35.0 39.0 10 37.461069767874704 39.0 37.0 39.0 35.0 39.0 11 37.56222589641064 39.0 37.0 39.0 35.0 39.0 12 37.500619476438494 39.0 37.0 39.0 35.0 39.0 13 37.54582233403336 39.0 37.0 39.0 35.0 39.0 14 38.81498655267721 40.0 38.0 41.0 35.0 41.0 15 38.785509772962044 40.0 38.0 41.0 35.0 41.0 16 38.761795954325635 40.0 38.0 41.0 35.0 41.0 17 38.7635101390022 40.0 38.0 41.0 35.0 41.0 18 38.76087527026482 40.0 38.0 41.0 35.0 41.0 19 38.779467008304145 40.0 38.0 41.0 35.0 41.0 20 38.767474540045725 40.0 38.0 41.0 35.0 41.0 21 38.69383222332172 40.0 38.0 41.0 34.0 41.0 22 38.63162214729084 40.0 38.0 41.0 34.0 41.0 23 38.61646126023284 40.0 38.0 41.0 34.0 41.0 24 38.562261880019484 40.0 38.0 41.0 34.0 41.0 25 38.5204197674094 40.0 38.0 41.0 34.0 41.0 26 38.324140348482636 40.0 38.0 41.0 34.0 41.0 27 38.20240593853627 40.0 38.0 41.0 34.0 41.0 28 38.103071945503444 40.0 38.0 41.0 33.0 41.0 29 38.00686046114856 40.0 37.0 41.0 33.0 41.0 30 37.923114195223484 40.0 37.0 41.0 33.0 41.0 31 37.85692296715875 40.0 37.0 41.0 33.0 41.0 32 37.767630262215036 40.0 37.0 41.0 33.0 41.0 33 37.71260449981233 40.0 37.0 41.0 33.0 41.0 34 37.63048121872761 40.0 37.0 41.0 33.0 41.0 35 37.561515530339456 40.0 37.0 41.0 33.0 41.0 36 37.50700036293812 40.0 37.0 41.0 32.0 41.0 37 37.308785894425334 40.0 36.0 41.0 32.0 41.0 38 37.19010512797446 40.0 36.0 41.0 31.0 41.0 39 37.106501555670675 40.0 36.0 41.0 31.0 41.0 40 36.98304303453496 39.0 36.0 41.0 31.0 41.0 41 36.84248237268472 39.0 35.0 41.0 31.0 41.0 42 36.726853388508204 39.0 35.0 41.0 30.0 41.0 43 35.875599700963804 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 5.0 10 3.0 11 7.0 12 3.0 13 1.0 14 2.0 15 3.0 16 8.0 17 16.0 18 38.0 19 102.0 20 199.0 21 408.0 22 761.0 23 1372.0 24 2307.0 25 3783.0 26 5902.0 27 8732.0 28 12625.0 29 17848.0 30 24138.0 31 31388.0 32 40826.0 33 52836.0 34 69530.0 35 92629.0 36 130466.0 37 200033.0 38 354685.0 39 561187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.2076006067581 19.40962065210985 12.049669788348135 24.33310895278392 2 19.053134761717164 21.4092546119509 33.46996764577239 26.067642980559548 3 21.514165443947775 23.859986537167035 28.27399656914902 26.351851449736174 4 14.704453592001713 15.141902602297366 34.114260366226276 36.03938343947463 5 14.461129947358462 37.22572579869652 33.73655655475557 14.576587699189439 6 35.199972702089845 33.81565845351135 15.527857827520636 15.456511016878174 7 28.85612450328661 30.255390561747564 21.64500929059556 19.24347564437027 8 28.3684845627216 31.34408085144663 20.327140636971915 19.960293948859846 9 26.937329581938712 13.896063207070158 20.507058681200736 38.65954852979039 10 18.211118314726292 26.60584609562334 31.91622023209428 23.26681535755609 11 34.94746703312043 22.308472588865556 21.256386315061313 21.487674062952703 12 23.034534958386196 25.84423440219128 28.037807605570013 23.083423033852508 13 30.2671782956798 20.04553787740136 25.377254016360133 24.31002981055871 14 23.133862126941487 21.22499371837863 25.610154822579094 30.030989332100795 15 25.93983912845218 27.6399405650047 22.920255979948443 23.49996432659468 16 24.90040915844886 26.27591362693063 24.74698249521511 24.076694719405403 17 23.78938421498345 26.250228775099345 25.604695240547322 24.355691769369884 18 23.154893925904783 24.686120563701845 27.89703724613719 24.261948264256176 19 24.357677071926894 25.111719799360362 27.83146022105103 22.699142907661717 20 24.97268657966492 24.43950876169855 26.962704230245464 23.625100428391068 21 25.074929661350815 24.751759629492913 26.98305358145479 23.190257127701486 22 24.907357717398384 24.962077619125907 27.045466530590723 23.085098132884983 23 24.15114356529319 24.92038626542875 26.749594408891674 24.17887576038639 24 23.592032732675907 25.62243888215058 27.289410582283036 23.496117802890478 25 23.951372495494294 25.57547406853637 26.64803377495975 23.825119661009587 26 23.839326982433175 25.924328952225554 26.828572226237636 23.407771839103635 27 24.096857948500013 24.954322531012597 26.8894341577509 24.059385362736492 28 23.42321997462535 25.547617792033357 27.080829732387418 23.948332500953875 29 23.532907940900024 25.986183535017325 27.421060958094607 23.059847565988044 30 23.615980444769814 25.898147774755014 26.794822082768505 23.691049697706664 31 23.065431229429628 26.52984623211289 26.987768675027684 23.416953863429796 32 22.89010419736389 25.744969274340896 26.778381295968284 24.586545232326927 33 22.478774323833868 26.127884505023747 27.353126386221998 24.040214784920387 34 24.087924086993475 25.083429237923 26.993848664108523 23.834798010975 35 23.29473367476401 25.334507970679564 27.260809817321146 24.10994853723528 36 22.52058975894084 26.23341574406968 27.37372390025096 23.87227059673852 37 23.300565501025222 25.047197466257607 27.713831044548325 23.93840598816884 38 23.194662017749845 25.231954685469137 27.4822330931324 24.091150203648613 39 23.09471444214549 24.980689830597854 27.7719011443408 24.152694582915853 40 22.278072643461375 24.923054015739726 28.31618424848543 24.482689092313468 41 21.46744879315319 25.280718679525638 28.86028123051534 24.391551296805837 42 22.195310343116116 25.05532479860036 29.083069401834543 23.666295456448978 43 22.25307023938406 24.68214995858783 28.574335621601332 24.490444180426778 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 721.0 1 634.5 2 548.0 3 1109.5 4 1671.0 5 1671.0 6 2243.0 7 2815.0 8 2650.0 9 2485.0 10 3568.0 11 4651.0 12 4651.0 13 8078.0 14 11505.0 15 14911.5 16 18318.0 17 18226.0 18 18134.0 19 18134.0 20 20403.5 21 22673.0 22 21165.0 23 19657.0 24 21910.5 25 24164.0 26 24164.0 27 27513.0 28 30862.0 29 35005.0 30 39148.0 31 43395.5 32 47643.0 33 47643.0 34 53038.5 35 58434.0 36 63811.5 37 69189.0 38 74294.0 39 79399.0 40 79399.0 41 82236.0 42 85073.0 43 87019.5 44 88966.0 45 91273.0 46 93580.0 47 93580.0 48 98780.5 49 103981.0 50 103686.0 51 103391.0 52 103605.5 53 103820.0 54 103820.0 55 100731.0 56 97642.0 57 96165.0 58 94688.0 59 95990.0 60 97292.0 61 97292.0 62 89576.5 63 81861.0 64 75079.0 65 68297.0 66 59068.0 67 49839.0 68 49839.0 69 44391.0 70 38943.0 71 32594.0 72 26245.0 73 18961.5 74 11678.0 75 11678.0 76 8594.0 77 5510.0 78 4524.0 79 3538.0 80 2886.5 81 2235.0 82 2235.0 83 1710.5 84 1186.0 85 1040.5 86 895.0 87 804.0 88 713.0 89 713.0 90 549.0 91 385.0 92 218.5 93 52.0 94 32.0 95 12.0 96 12.0 97 7.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1611845.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.292691470273375 #Duplication Level Percentage of deduplicated Percentage of total 1 87.75209524409428 52.03057909178125 2 7.977207083956392 9.459801568470109 3 1.7710971406191507 3.1503934896784402 4 0.6749666487017412 1.6008235701678692 5 0.3553000470640884 1.05333480349723 6 0.2273630958103105 0.8088581934964167 7 0.16614029740276032 0.6895633776276929 8 0.11553368338127432 0.5480242434520117 9 0.09418003376317288 0.5025768916121766 >10 0.6674124551439992 7.928165620019155 >50 0.09532970930230808 3.980310816879569 >100 0.0915275125639596 11.14785504684621 >500 0.009016337565565557 3.573261061832694 >1k 0.0025161872275996904 2.266467734498104 >5k 3.145234034499613E-4 1.2599844901410333 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7448 0.46207917014353117 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6444 0.3997903024174161 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6377 0.3956335751886813 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4455 0.2763913403584092 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 2621 0.16260868755990807 No Hit GGCCTAGGTATGGGAAAAGACACAAAGAGGACACGCTGGCCTT 2080 0.12904466620549743 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA 2026 0.12569446814054702 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 1957 0.12141365950199927 No Hit GTATGCAGCTGATCTCCGTAGATACATCAACATGCTGACCAGG 1755 0.10888143711088845 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.240814098129783E-4 0.0 2 0.0 0.0 0.0 0.0019232618521011636 0.0 3 0.0 0.0 0.0 0.0024195874913530767 0.0 4 0.0 0.0 0.0 0.004653052867986686 0.0 5 0.0 6.204070490648915E-5 0.0 0.0051493785072386 0.0 6 0.0 6.204070490648915E-5 0.0 0.005459582031771045 0.0 7 0.0 6.204070490648915E-5 0.0 0.006328151900461893 0.0 8 0.0 6.204070490648915E-5 0.0 0.006886518244620296 0.0 9 0.0 6.204070490648915E-5 6.204070490648915E-5 0.010360797719383688 0.0 10 0.0 6.204070490648915E-5 6.204070490648915E-5 0.014765687767744418 0.0 11 0.0 1.240814098129783E-4 6.204070490648915E-5 0.017557519488536427 0.0 12 0.0 1.8612211471946745E-4 6.204070490648915E-5 0.019977106979889504 0.0 13 0.0 1.8612211471946745E-4 6.204070490648915E-5 0.020907717553486842 0.0 14 0.0 1.8612211471946745E-4 6.204070490648915E-5 0.022024450241803648 0.0 15 0.0 1.8612211471946745E-4 6.204070490648915E-5 0.0245681191429697 0.0 16 0.0 2.481628196259566E-4 6.204070490648915E-5 0.028600764961891498 0.0 17 0.0 2.481628196259566E-4 6.204070490648915E-5 0.03275749219062627 0.0 18 0.0 3.1020352453244574E-4 6.204070490648915E-5 0.0354252425016053 0.0 19 0.0 3.1020352453244574E-4 6.204070490648915E-5 0.03877544056655572 0.0 20 0.0 3.1020352453244574E-4 6.204070490648915E-5 0.0423117607462256 0.0 21 0.0 3.1020352453244574E-4 6.204070490648915E-5 0.04944644181047185 0.0 22 0.0 3.1020352453244574E-4 6.204070490648915E-5 0.05937295459551011 0.0 23 0.0 3.722442294389349E-4 6.204070490648915E-5 0.07308395037984422 0.0 24 0.0 5.583663441584023E-4 6.204070490648915E-5 0.09237860960576234 0.0 25 0.0 5.583663441584023E-4 6.204070490648915E-5 0.0995132906700086 0.0 26 0.0 5.583663441584023E-4 6.204070490648915E-5 0.1126659201101843 0.0 27 0.0 5.583663441584023E-4 6.204070490648915E-5 0.13270506779498029 0.0 28 0.0 7.444884588778698E-4 6.204070490648915E-5 0.1732176480989177 0.0 29 0.0 9.306105735973372E-4 6.204070490648915E-5 0.2354444751201263 0.0 30 0.0 9.306105735973372E-4 6.204070490648915E-5 0.31851697898991527 0.0 31 0.0 9.306105735973372E-4 6.204070490648915E-5 0.5991270872819657 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 145 7.2759576E-12 19.13793 16 AAGACGG 220 0.0 17.65909 5 ACGAACG 165 5.4569682E-11 16.818182 15 GGTATCA 3835 0.0 15.919165 1 GGCGATA 70 0.0025931008 15.857142 35 TAGTTCG 95 7.06249E-5 15.578948 7 GCTTTAT 675 0.0 15.348148 1 ACGGACC 255 0.0 15.235294 8 TAACGAA 185 3.0559022E-10 15.0 13 TCCGATA 210 9.094947E-12 14.9761915 8 CCGATAA 210 9.094947E-12 14.9761915 9 AATGCCG 75 0.0041053593 14.8 5 TTTCGGA 200 6.184564E-11 14.799999 30 TCTTATA 1815 0.0 14.575759 37 TATACTG 230 1.8189894E-12 14.478261 5 CGAGCCG 260 0.0 14.230769 15 TACGACG 235 3.6379788E-12 14.170214 5 GACGGAC 275 0.0 14.127274 7 CGCAAGA 315 0.0 14.095239 2 AATACTG 420 0.0 14.095239 5 >>END_MODULE