##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630560.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 692257 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.859660501807856 33.0 31.0 34.0 30.0 34.0 2 31.964924876165934 33.0 31.0 34.0 30.0 34.0 3 32.002682529754125 33.0 31.0 34.0 30.0 34.0 4 35.64941488493435 37.0 35.0 37.0 33.0 37.0 5 35.665866867362844 37.0 35.0 37.0 33.0 37.0 6 35.74925063957461 37.0 35.0 37.0 35.0 37.0 7 35.71492379275327 37.0 35.0 37.0 33.0 37.0 8 35.747169042711015 37.0 35.0 37.0 35.0 37.0 9 37.38687943928339 39.0 37.0 39.0 34.0 39.0 10 37.284304817430524 39.0 37.0 39.0 34.0 39.0 11 37.439354170488706 39.0 37.0 39.0 35.0 39.0 12 37.38791229268899 39.0 37.0 39.0 34.0 39.0 13 37.444918577926984 39.0 37.0 39.0 35.0 39.0 14 38.56678372338597 40.0 38.0 41.0 34.0 41.0 15 38.510875296313365 40.0 38.0 41.0 34.0 41.0 16 38.436869544114394 40.0 38.0 41.0 34.0 41.0 17 38.51916845911273 40.0 38.0 41.0 34.0 41.0 18 38.56637924932503 40.0 38.0 41.0 34.0 41.0 19 38.63286178399063 40.0 38.0 41.0 34.0 41.0 20 38.616078999562305 40.0 38.0 41.0 34.0 41.0 21 38.54390060338863 40.0 38.0 41.0 34.0 41.0 22 38.44498936088765 40.0 38.0 41.0 34.0 41.0 23 38.374066278853086 40.0 38.0 41.0 34.0 41.0 24 38.30800410830082 40.0 38.0 41.0 34.0 41.0 25 38.22354125707649 40.0 37.0 41.0 34.0 41.0 26 37.93563373140322 40.0 37.0 41.0 33.0 41.0 27 37.74131861432965 40.0 36.0 41.0 33.0 41.0 28 37.57301262392435 40.0 36.0 41.0 33.0 41.0 29 37.398604853399824 39.0 36.0 41.0 32.0 41.0 30 37.18179231123701 39.0 35.0 41.0 32.0 41.0 31 37.01089768684174 39.0 35.0 41.0 32.0 41.0 32 36.781702460213474 39.0 35.0 41.0 31.0 41.0 33 36.61803492055696 39.0 35.0 41.0 31.0 41.0 34 36.42234314712599 39.0 35.0 41.0 30.0 41.0 35 36.2146067139805 39.0 35.0 41.0 30.0 41.0 36 36.04965785828096 38.0 35.0 40.0 30.0 41.0 37 35.70202684841035 38.0 35.0 40.0 28.0 41.0 38 35.421418634986715 38.0 35.0 40.0 26.0 41.0 39 35.15536859865628 38.0 35.0 40.0 25.0 41.0 40 34.8524666417241 38.0 34.0 40.0 23.0 41.0 41 34.51213783320357 38.0 34.0 40.0 21.0 41.0 42 34.16521465293959 38.0 33.0 40.0 18.0 41.0 43 33.24070251366183 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 5.0 11 11.0 12 2.0 13 3.0 14 1.0 15 4.0 16 8.0 17 19.0 18 30.0 19 103.0 20 171.0 21 381.0 22 664.0 23 1114.0 24 1858.0 25 2896.0 26 4378.0 27 6395.0 28 8825.0 29 11873.0 30 15271.0 31 18644.0 32 22859.0 33 29049.0 34 36818.0 35 47220.0 36 65048.0 37 104295.0 38 146319.0 39 167988.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.845690256653235 20.274406759339378 13.156674472053009 20.723228511954375 2 19.494638551867297 22.53715022022168 33.284026019238524 24.684185208672503 3 22.66094817387184 26.470371552761474 28.869913919252532 21.998766354114153 4 13.634676139063961 16.835654966291422 32.70880612258164 36.82086277206298 5 12.473691129161569 41.37004031739657 31.532942245437752 14.623326308004108 6 31.330849669992507 33.22711074066424 17.367104991354367 18.074934597988896 7 26.86690058749857 33.53277756671294 21.220731606903218 18.379590238885267 8 31.05566285353561 29.945959376358783 19.395542406938464 19.60283536316715 9 28.795086217979737 12.239529538885124 22.17153456014168 36.793849682993454 10 20.98093627077805 28.455905826882212 29.057560992521562 21.505596909818177 11 32.17345581193112 24.18379301328842 19.650216610305133 23.99253456447533 12 22.403095960026405 30.363867754316676 26.393232571140484 20.83980371451643 13 29.780847286484647 20.532836793271862 28.33889725925487 21.34741866098862 14 22.947980302113233 22.773478635824556 28.33413024353672 25.944410818525487 15 27.192502206550458 26.16759382714801 26.631727812069794 20.008176154231737 16 23.30001719014759 25.50887892791261 28.672443904503673 22.518659977436126 17 21.84001028519755 27.840382979153695 27.846883455132993 22.472723280515762 18 20.327421752326085 23.70478016112513 32.068437011110035 23.899361075438748 19 21.021672586914974 26.20587440791498 32.65116856889855 20.121284436271498 20 22.068249219581745 23.41240319707854 34.206371333189836 20.312976250149873 21 22.99825064968646 25.281651178680747 32.042724017236374 19.677374154396414 22 23.83623423092869 24.926436280167625 30.81037822658348 20.42695126232021 23 21.753481727162022 25.006753272267378 31.8861347736462 21.353630226924395 24 20.192934127065527 27.228615961990993 31.063318969689004 21.515130941254476 25 20.510735174942255 26.361741376396335 32.05572496919496 21.07179847946644 26 20.95146744633857 27.4980245775774 31.24663239230517 20.303875583778858 27 21.311015995504558 27.059892496572807 31.144791601962858 20.48429990595978 28 19.96657310796424 26.92439368615991 32.43983087206052 20.66920233381533 29 19.958772536789084 27.42608597673985 32.76471021600359 19.85043127046747 30 18.200466011900204 28.448538620772347 33.49839727153355 19.8525980957939 31 20.496867492853088 28.684433671309932 30.73410597509307 20.084592860743914 32 18.8252339810215 27.992349662047477 31.708021731813474 21.47439462511755 33 18.528378911300283 28.09000125675869 32.03593463121355 21.345685200727477 34 20.090082151570876 27.738397733789615 31.84063144179113 20.33088867284838 35 18.80255454260484 29.14553410077471 31.673063616547033 20.37884774007341 36 19.45390223573037 29.036903924409575 30.576505546350564 20.93268829350949 37 19.39929823750428 27.636123578382016 31.695165234876644 21.26941294923706 38 19.07470780360473 26.943028383967228 31.555621683854408 22.426642128573636 39 19.464014087253723 28.09086798688926 31.73330136062185 20.711816565235168 40 18.38363497949461 28.103291118760808 31.40928874680935 22.103785154935235 41 18.781464109427567 27.769744473512002 31.42330088392028 22.02549053314015 42 18.2390355027107 28.61177279536357 31.94420569239459 21.204986009531144 43 17.845828933474127 26.87527897876078 31.459270184339054 23.81962190342604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 546.0 1 412.5 2 279.0 3 838.5 4 1398.0 5 1398.0 6 2147.5 7 2897.0 8 3022.5 9 3148.0 10 4640.0 11 6132.0 12 6132.0 13 11058.0 14 15984.0 15 22127.0 16 28270.0 17 25496.0 18 22722.0 19 22722.0 20 23833.0 21 24944.0 22 17972.5 23 11001.0 24 10037.0 25 9073.0 26 9073.0 27 9739.0 28 10405.0 29 11472.0 30 12539.0 31 14175.5 32 15812.0 33 15812.0 34 18617.0 35 21422.0 36 23318.5 37 25215.0 38 29456.0 39 33697.0 40 33697.0 41 35631.0 42 37565.0 43 40497.5 44 43430.0 45 43612.5 46 43795.0 47 43795.0 48 47802.0 49 51809.0 50 49639.5 51 47470.0 52 46431.0 53 45392.0 54 45392.0 55 40359.0 56 35326.0 57 32309.0 58 29292.0 59 27960.0 60 26628.0 61 26628.0 62 24928.0 63 23228.0 64 21355.5 65 19483.0 66 18279.0 67 17075.0 68 17075.0 69 13568.5 70 10062.0 71 8767.5 72 7473.0 73 5484.5 74 3496.0 75 3496.0 76 2795.5 77 2095.0 78 1618.5 79 1142.0 80 918.5 81 695.0 82 695.0 83 599.5 84 504.0 85 434.5 86 365.0 87 318.0 88 271.0 89 271.0 90 202.5 91 134.0 92 86.0 93 38.0 94 20.0 95 2.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 692257.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.16022818909772 #Duplication Level Percentage of deduplicated Percentage of total 1 79.04445502813702 25.420877107877597 2 9.373606501693333 6.029146480985352 3 3.2626658970431524 3.1478423926108503 4 1.708105743594054 2.197322819403729 5 1.0955276107474716 1.761620897454786 6 0.7636052546052186 1.4734631540698737 7 0.5863681385972805 1.3200413198073513 8 0.44573177978573 1.1467868599233388 9 0.3476291685447427 1.0061850047026715 >10 2.722365220638639 17.715581192521224 >50 0.3452522725153717 7.806583190376626 >100 0.27133403140086415 17.297519037247813 >500 0.026141816978820797 5.579526889532923 >1k 0.005408651788721545 2.302286854059322 >5k 9.014419647869242E-4 2.276630191390525 >10k+ 9.014419647869242E-4 3.5185866080360126 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12211 1.7639402707376017 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12063 1.7425609275168035 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9472 1.3682779661310756 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6234 0.9005326056652372 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1751 0.25294074310552295 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1620 0.2340171352546814 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1617 0.233583770189395 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 1552 0.22419419377485528 No Hit CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGC 1371 0.19804783483590632 No Hit CTTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGT 1324 0.19125844881308532 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 1253 0.18100214226797273 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1134 0.163811994678277 No Hit TCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA 1116 0.16121180428655832 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 1076 0.15543360341607237 No Hit GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG 1055 0.15240004795906723 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 1014 0.14647739206681912 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 976 0.14098810123985744 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 908 0.13116515976003132 No Hit GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC 890 0.12856496936831263 No Hit CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTC 871 0.1258203239548318 No Hit GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 866 0.12509804884602105 No Hit CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATC 865 0.12495359382425891 No Hit TCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTT 858 0.12394240867192385 RNA PCR Primer, Index 47 (95% over 22bp) ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 854 0.12336458858487527 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 841 0.12148667330196734 No Hit CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCAT 801 0.11570847243148137 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 792 0.11440837723562204 No Hit GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 791 0.11426392221385988 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 778 0.11238600693095195 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 775 0.11195264186566549 No Hit GAGTAATCCAGGTCGGTTTCTATCTACTTCAAATTCCTCCCTG 752 0.10863017636513607 No Hit ACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATC 749 0.10819681129984962 No Hit CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG 740 0.10689671610399029 No Hit ATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGA 725 0.10472989077755805 No Hit ATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTG 721 0.10415207069050945 No Hit GTACATGGGCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCAC 714 0.10314088553817441 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 714 0.10314088553817441 No Hit CTACTATACTCAATTGATCCAATAACTTGACCAACGGAACAAG 710 0.10256306545112581 No Hit ACCCGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGT 704 0.10169633532055292 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.333650652864471E-4 0.0 3 0.0 0.0 0.0 0.0010111851523350432 0.0 4 0.0 0.0 0.0 0.0013000951958593414 0.0 5 0.0 0.0 0.0 0.0015890052393836393 0.0 6 0.0 0.0 0.0 0.0015890052393836393 0.0 7 0.0 0.0 0.0 0.0017334602611457884 0.0 8 0.0 0.0 0.0 0.0018779152829079373 0.0 9 0.0 0.0 0.0 0.003900285587578024 0.0 10 0.0 0.0 0.0 0.005778200870485961 0.0 11 0.0 0.0 0.0 0.007367206109869601 0.0 12 0.0 0.0 0.0 0.010834126632161177 0.0 13 0.0 0.0 0.0 0.011556401740971922 0.0 14 0.0 0.0 0.0 0.013578772045642009 0.0 15 0.0 0.0 0.0 0.018345787763792927 0.0 16 0.0 0.0 0.0 0.029324369417716253 0.0 17 0.0 0.0 0.0 0.04535887683331479 0.0 18 0.0 0.0 0.0 0.05330390303023299 0.0 19 0.0 0.0 0.0 0.06341575455358342 0.0 20 0.0 0.0 0.0 0.07179414581578807 0.0 21 0.0 0.0 0.0 0.09577367942830481 0.0 22 0.0 0.0 0.0 0.13362089512998784 0.0 23 0.0 0.0 0.0 0.18215778244206993 0.0 24 0.0 0.0 0.0 0.26117467934596544 0.0 25 0.0 0.0 0.0 0.2803871972403313 0.0 26 0.0 0.0 0.0 0.30884483652747463 0.0 27 0.0 0.0 0.0 0.34611423214210907 0.0 28 0.0 0.0 0.0 0.4098188967392168 0.0 29 0.0 0.0 0.0 0.5042924809716622 0.0 30 0.0 0.0 0.0 0.6720047612375173 0.0 31 0.0 0.0 0.0 1.125449074548903 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTCCA 25 1.2331188E-4 36.999996 18 TCCATTA 25 0.005494853 29.599998 21 CGGTTAT 25 0.005494853 29.599998 14 AGAACCG 25 0.005494853 29.599998 5 TGCGGTA 40 5.9367692E-5 27.75 36 TAGTGTC 55 6.2557046E-7 26.90909 19 AACTTAT 45 1.3224693E-4 24.666668 10 CCGTCTT 140 0.0 23.785715 37 GGTAAAC 170 0.0 22.852942 35 CCGGACC 50 2.7005986E-4 22.199999 34 GCAGCGT 50 2.7005986E-4 22.199999 1 TTGGTAA 185 0.0 22.0 33 GCAGTCG 390 0.0 21.820513 9 TCTATAC 60 3.7235302E-5 21.583334 3 CTAGTGT 70 5.0970866E-6 21.142859 18 GTAAACA 185 0.0 21.0 36 GCCGTCT 160 0.0 20.8125 36 TCTTGGA 45 0.0038242934 20.555557 2 CGATGCA 45 0.0038242934 20.555557 34 GAACCGC 45 0.0038242934 20.555557 6 >>END_MODULE