##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630558.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 627505 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97222810973618 33.0 31.0 34.0 30.0 34.0 2 32.105675651986836 33.0 31.0 34.0 30.0 34.0 3 32.188342722368745 34.0 31.0 34.0 30.0 34.0 4 35.790506848551004 37.0 35.0 37.0 35.0 37.0 5 35.781981020071555 37.0 35.0 37.0 35.0 37.0 6 35.83375749994024 37.0 35.0 37.0 35.0 37.0 7 35.79732113688337 37.0 35.0 37.0 35.0 37.0 8 35.81596003219098 37.0 35.0 37.0 35.0 37.0 9 37.510552107154524 39.0 37.0 39.0 35.0 39.0 10 37.41977354762113 39.0 37.0 39.0 34.0 39.0 11 37.54828726464331 39.0 37.0 39.0 35.0 39.0 12 37.47927586234373 39.0 37.0 39.0 35.0 39.0 13 37.53168500649397 39.0 37.0 39.0 35.0 39.0 14 38.76700105975251 40.0 38.0 41.0 35.0 41.0 15 38.72952566115011 40.0 38.0 41.0 35.0 41.0 16 38.68462721412578 40.0 38.0 41.0 34.0 41.0 17 38.7109457295161 40.0 38.0 41.0 35.0 41.0 18 38.726961538155074 40.0 38.0 41.0 35.0 41.0 19 38.77392849459367 40.0 38.0 41.0 35.0 41.0 20 38.75902662130182 40.0 38.0 41.0 35.0 41.0 21 38.68474195424738 40.0 38.0 41.0 34.0 41.0 22 38.61970024143234 40.0 38.0 41.0 34.0 41.0 23 38.571812176795405 40.0 38.0 41.0 34.0 41.0 24 38.51044374148413 40.0 38.0 41.0 34.0 41.0 25 38.452249782870254 40.0 38.0 41.0 34.0 41.0 26 38.20844933506506 40.0 37.0 41.0 34.0 41.0 27 38.06904327455558 40.0 37.0 41.0 33.0 41.0 28 37.95720671548434 40.0 37.0 41.0 33.0 41.0 29 37.81285726806958 40.0 37.0 41.0 33.0 41.0 30 37.68408538577382 40.0 37.0 41.0 33.0 41.0 31 37.56581063099099 40.0 36.0 41.0 33.0 41.0 32 37.40031394172158 40.0 36.0 41.0 32.0 41.0 33 37.31506999944224 40.0 35.0 41.0 32.0 41.0 34 37.1735109680401 39.0 35.0 41.0 32.0 41.0 35 37.067535716846876 39.0 35.0 41.0 31.0 41.0 36 36.94662831371861 39.0 35.0 41.0 31.0 41.0 37 36.679478251169314 39.0 35.0 41.0 31.0 41.0 38 36.49983346746241 39.0 35.0 41.0 30.0 41.0 39 36.33222046039474 39.0 35.0 41.0 30.0 41.0 40 36.13352881650346 39.0 35.0 41.0 29.0 41.0 41 35.89549884064669 39.0 35.0 41.0 28.0 41.0 42 35.703186428793394 39.0 35.0 41.0 27.0 41.0 43 34.83790886128397 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 3.0 12 1.0 13 3.0 14 2.0 15 2.0 16 2.0 17 3.0 18 23.0 19 37.0 20 106.0 21 218.0 22 433.0 23 732.0 24 1235.0 25 1852.0 26 2942.0 27 4373.0 28 6121.0 29 8413.0 30 11005.0 31 14077.0 32 17642.0 33 22748.0 34 29387.0 35 37744.0 36 52721.0 37 82772.0 38 133223.0 39 199682.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.13669213791125 19.176580266292696 12.423327304164907 23.263400291631143 2 18.42359821834089 21.77130062708664 34.49613947299225 25.30896168158023 3 21.523334475422505 24.476936438753476 29.014430163903075 24.98529892192094 4 14.77310937761452 15.762264842511215 32.76324491438316 36.70138086549111 5 13.916064413829371 38.501366522975914 32.934080206532215 14.648488856662498 6 34.30426849188453 33.06762495916367 16.200667723763157 16.427438825188645 7 28.097784081401745 31.537597309981596 21.529390204062118 18.835228404554545 8 28.56375646409192 32.578226468314995 19.87410458880806 18.98391247878503 9 27.326634847531096 13.23702599979283 20.805730631628432 38.63060852104764 10 18.1499749005984 27.732209305105137 31.57138190133943 22.54643389295703 11 33.70953219496259 22.647309583190573 21.09736177400977 22.54579644783707 12 21.360945331112898 27.15691508434196 29.063194715579954 22.418944868965188 13 30.033067465597885 20.534179010525815 26.177799380084622 23.254954143791686 14 22.87137154285623 21.594250245017967 27.070541270587483 28.46383694153831 15 26.252061736559867 26.854447374921314 24.562513446108 22.33097744241082 16 23.822280300555374 26.297479701356963 26.481382618465194 23.398857379622473 17 22.166516601461343 27.422889060644934 27.34814862032972 23.062445717564003 18 21.787077393805625 25.28250770910192 29.34191759428212 23.588497302810335 19 22.57734998127505 26.12058868056828 29.85872622528904 21.443335112867626 20 23.04794384108493 24.97956191584131 30.177926869108614 21.794567373965148 21 23.79327654759723 25.282188986541943 28.974749205185617 21.949785260675213 22 23.72379502952168 25.487286953888816 28.45172548425909 22.33719253233042 23 22.84316459629804 25.991346682496552 28.73411367240102 22.43137504880439 24 22.490179361120628 26.625445215575972 28.614592712408665 22.269782710894734 25 22.588505270874336 26.170946845045055 28.83403319495462 22.406514689125984 26 22.45033904112318 26.453653755746963 28.788455868877538 22.307551334252317 27 22.51392419183911 26.510545732703328 28.492203249376498 22.48332682608107 28 21.87137951092023 26.543374156381223 29.402315519398254 22.182930813300292 29 21.89592114803866 26.992932327232456 29.322634879403353 21.788511645325535 30 21.748671325328083 27.3702998382483 29.062238547900016 21.818790288523598 31 21.912175998597622 27.345598839849885 28.613955267288706 22.12826989426379 32 21.260707085999314 27.273089457454525 29.12901092421574 22.33719253233042 33 21.39138333559095 27.077712528187025 29.36167839300085 22.16922574322117 34 21.839825977482253 26.864009051720707 28.918972757189188 22.37719221360786 35 21.684289368212205 27.12838941522378 28.863036947912768 22.324284268651244 36 21.349152596393655 27.085043147066557 28.543198858973234 23.022605397566554 37 21.457518266786717 26.68552441813213 28.98064557254524 22.876311742535915 38 21.207161695922743 26.341622775914136 29.505900351391624 22.9453151767715 39 21.20795850232269 26.463534155106334 29.64900678082246 22.67950056174851 40 20.842383726026085 26.439789324387853 29.9390443104039 22.778782639182158 41 20.371789866216204 26.472458386785764 29.97378506944168 23.181966677556353 42 20.36605286013657 26.48345431510506 30.010916247679305 23.13957657707907 43 20.082867865594697 26.35867443287305 29.76231265089521 23.796145050637048 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 249.0 1 229.0 2 209.0 3 565.5 4 922.0 5 922.0 6 1356.5 7 1791.0 8 1846.5 9 1902.0 10 2832.0 11 3762.0 12 3762.0 13 6405.0 14 9048.0 15 12077.5 16 15107.0 17 13771.0 18 12435.0 19 12435.0 20 13525.5 21 14616.0 22 11816.5 23 9017.0 24 9221.0 25 9425.0 26 9425.0 27 10592.0 28 11759.0 29 13020.0 30 14281.0 31 15732.0 32 17183.0 33 17183.0 34 19260.0 35 21337.0 36 23308.5 37 25280.0 38 28304.5 39 31329.0 40 31329.0 41 32946.5 42 34564.0 43 36118.5 44 37673.0 45 38661.5 46 39650.0 47 39650.0 48 40971.5 49 42293.0 50 41628.5 51 40964.0 52 40238.5 53 39513.0 54 39513.0 55 37664.0 56 35815.0 57 34412.0 58 33009.0 59 31354.5 60 29700.0 61 29700.0 62 27843.0 63 25986.0 64 23437.5 65 20889.0 66 18428.5 67 15968.0 68 15968.0 69 13684.0 70 11400.0 71 9743.5 72 8087.0 73 6668.5 74 5250.0 75 5250.0 76 4156.5 77 3063.0 78 2481.5 79 1900.0 80 1491.0 81 1082.0 82 1082.0 83 796.5 84 511.0 85 394.5 86 278.0 87 224.0 88 170.0 89 170.0 90 121.5 91 73.0 92 42.5 93 12.0 94 7.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 627505.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.59117115888327 #Duplication Level Percentage of deduplicated Percentage of total 1 87.9559090465196 61.20954720891515 2 7.597683960741983 10.574634498461949 3 1.8518446939644466 3.8661612317204876 4 0.7652460226387504 2.130174677604318 5 0.4138910252847495 1.4401580590858345 6 0.27510021281410213 1.1486727597474835 7 0.1813600204514123 0.8834739357228961 8 0.13361084455218505 0.7438508121531245 9 0.09857072874841219 0.6173687210027947 >10 0.6494432374542861 8.514422804156107 >50 0.052856813585492504 2.49555610069759 >100 0.0224240424109548 2.71020118945614 >500 0.0011440837964544193 0.6278685834252109 >1k 4.576335185817677E-4 1.2162465737260364 >5k 4.576335185817677E-4 1.8216628441248828 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5821 0.9276420108206309 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5619 0.8954510322626912 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4403 0.7016677157950932 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3235 0.5155337407670059 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 957 0.15250874495023944 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 916 0.1459749324706576 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 820 0.1306762495916367 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 697 0.11107481215289121 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.1872255997960177E-4 0.0 3 0.0 0.0 0.0 7.968063999490044E-4 0.0 4 0.0 0.0 0.0 0.001274890239918407 0.0 5 0.0 0.0 0.0 0.001434251519908208 0.0 6 0.0 0.0 0.0 0.0015936127998980088 0.0 7 0.0 0.0 0.0 0.0015936127998980088 0.0 8 0.0 0.0 0.0 0.0015936127998980088 0.0 9 0.0 0.0 0.0 0.002549780479836814 0.0 10 0.0 0.0 0.0 0.0035059481597756194 0.0 11 0.0 0.0 0.0 0.004780838399694026 0.0 12 0.0 0.0 0.0 0.006693173759571637 0.0 13 0.0 0.0 0.0 0.008127425279479844 0.0 14 0.0 0.0 0.0 0.01099592831929626 0.0 15 0.0 0.0 0.0 0.01689229567891889 0.0 16 0.0 0.0 0.0 0.02486035967840894 0.0 17 0.0 0.0 0.0 0.0363343718376746 0.0 18 0.0 0.0 0.0 0.040796487677389026 0.0 19 0.0 0.0 0.0 0.05131433215671588 0.0 20 0.0 0.0 0.0 0.05768878335630792 0.0 21 0.0 0.0 0.0 0.06884407295559399 0.0 22 0.0 0.0 0.0 0.09402315519398252 0.0 23 0.0 0.0 0.0 0.1292419980717285 0.0 24 0.0 0.0 0.0 0.19330523262762847 0.0 25 0.0 0.0 0.0 0.20892263806662895 0.0 26 0.0 0.0 0.0 0.2345798041449869 0.0 27 0.0 0.0 0.0 0.2715516211026207 0.0 28 0.0 0.0 0.0 0.33179018493876544 0.0 29 0.0 1.5936127998980088E-4 0.0 0.4138612441335129 0.0 30 0.0 1.5936127998980088E-4 0.0 0.5467685516450068 0.0 31 0.0 1.5936127998980088E-4 0.0 0.9246141465008247 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACCGA 25 0.005494465 29.6 25 GTATTGA 45 0.003823902 20.555555 1 CGGGGTA 45 0.003823902 20.555555 30 TAGAACT 135 5.638867E-11 19.185186 4 TAGGCCG 50 0.007031409 18.5 5 TCACGTA 120 5.160473E-9 18.5 25 ATCACGT 125 8.556526E-9 17.76 24 TCTTGTA 105 4.7886897E-7 17.619047 2 CCTAGAA 85 2.7199263E-5 17.411764 2 GCCGCAC 75 2.0653814E-4 17.266666 12 CTAGGAC 75 2.0653814E-4 17.266666 3 GCCTACA 65 0.0015788535 17.076923 1 AGTCGGT 175 7.2759576E-12 16.914286 11 ATAGGCC 80 3.3795042E-4 16.1875 3 GTTTAAG 70 0.0025907347 15.857143 1 TTAGAAC 70 0.0025907347 15.857143 3 ATAAGAC 70 0.0025907347 15.857143 3 TAGAGGT 105 9.329502E-6 15.857142 4 CAGTCGG 190 2.7284841E-11 15.578948 10 TTAATCG 145 5.331276E-8 15.310345 37 >>END_MODULE