##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630496.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 225486 Sequences flagged as poor quality 0 Sequence length 43 %GC 32 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.85308622264797 33.0 31.0 34.0 30.0 34.0 2 31.84787525611346 33.0 31.0 34.0 30.0 34.0 3 31.809584630531386 33.0 31.0 34.0 28.0 34.0 4 35.558487001410285 37.0 35.0 37.0 33.0 37.0 5 35.603731495525224 37.0 35.0 37.0 33.0 37.0 6 35.78434581304383 37.0 35.0 37.0 35.0 37.0 7 35.6730218284062 37.0 35.0 37.0 33.0 37.0 8 35.80873757129046 37.0 35.0 37.0 35.0 37.0 9 37.28483364820876 39.0 37.0 39.0 34.0 39.0 10 37.26651765519811 39.0 37.0 39.0 34.0 39.0 11 37.43725552805939 39.0 37.0 39.0 35.0 39.0 12 37.4298759124735 39.0 37.0 39.0 35.0 39.0 13 37.47515145064438 39.0 37.0 39.0 35.0 39.0 14 38.372408930044436 40.0 38.0 41.0 34.0 41.0 15 38.278048304551056 40.0 38.0 41.0 34.0 41.0 16 38.11446386915374 40.0 37.0 41.0 33.0 41.0 17 38.451092307282934 40.0 38.0 41.0 34.0 41.0 18 38.6578013712603 40.0 38.0 41.0 35.0 41.0 19 38.85055391465546 40.0 38.0 41.0 35.0 41.0 20 38.896499117461836 40.0 38.0 41.0 35.0 41.0 21 38.86380529168108 40.0 38.0 41.0 35.0 41.0 22 38.69245540743106 40.0 38.0 41.0 35.0 41.0 23 38.54510701329573 40.0 38.0 41.0 35.0 41.0 24 38.413134296586044 40.0 38.0 41.0 34.0 41.0 25 38.31828583592773 40.0 37.0 41.0 34.0 41.0 26 37.92703759878662 40.0 36.0 41.0 34.0 41.0 27 37.618770123200555 40.0 35.0 41.0 33.0 41.0 28 37.37936723344243 39.0 35.0 41.0 33.0 41.0 29 37.05242010590458 39.0 35.0 41.0 33.0 41.0 30 36.63056686446165 38.0 35.0 40.0 32.0 41.0 31 36.09651153508422 37.0 35.0 40.0 31.0 41.0 32 35.610020134287716 37.0 35.0 40.0 31.0 41.0 33 35.166169961771466 35.0 35.0 40.0 30.0 41.0 34 34.808134429632 35.0 35.0 40.0 28.0 41.0 35 34.38187293224413 35.0 35.0 40.0 24.0 41.0 36 33.89843271866103 35.0 34.0 40.0 21.0 41.0 37 33.272136629325104 35.0 33.0 40.0 18.0 41.0 38 32.6647729792537 35.0 33.0 39.0 15.0 41.0 39 32.08516271520183 35.0 33.0 39.0 10.0 41.0 40 31.343134385283342 35.0 31.0 39.0 8.0 41.0 41 30.648913901528253 35.0 30.0 39.0 7.0 41.0 42 29.871029686987217 35.0 24.0 38.0 7.0 41.0 43 28.989649024773158 35.0 21.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 5.0 11 8.0 12 2.0 13 2.0 14 2.0 15 2.0 16 2.0 17 10.0 18 13.0 19 53.0 20 89.0 21 166.0 22 301.0 23 544.0 24 809.0 25 1407.0 26 2187.0 27 3167.0 28 4584.0 29 5913.0 30 7258.0 31 8157.0 32 9617.0 33 11497.0 34 14175.0 35 16885.0 36 23459.0 37 45068.0 38 39841.0 39 30258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 55.037119821186245 17.802879114446128 15.198282820219436 11.961718244148194 2 15.560611301810312 29.57389815775702 33.34530746919987 21.520183071232804 3 23.85691351126012 34.34270863823031 31.145170875353678 10.655206975155886 4 11.685426146190894 17.705312081459603 27.679323771764103 42.9299380005854 5 8.899443867911977 49.67980273719876 27.041590165243072 14.379163229646185 6 27.44560637911001 29.306475790071225 21.069157286926902 22.17876054389186 7 20.858944679492296 39.639268069858 22.586324649867397 16.91546260078231 8 38.10480473288807 26.576372812502775 19.917866297685887 15.400956156923268 9 30.78993817798001 8.82804253922638 24.326122242622603 36.05589704017101 10 20.172871042991584 36.20712594130012 23.433827377309456 20.186175638398836 11 23.600134819900127 29.727344491454016 18.04014439920882 28.63237628943704 12 19.623391252672008 38.20192827936103 28.982287148647814 13.192393319319159 13 31.97981249390206 20.69574164249665 32.12261515127325 15.201830712328038 14 24.374905759115865 24.351844460409957 36.52954063666924 14.743709143804937 15 27.42831040508058 24.657406668263217 34.33117798887736 13.583104937778842 16 16.0652989542588 25.787853791366206 38.01388999760517 20.13295725676982 17 13.662932510222364 32.611337289233035 36.57566323408105 17.15006696646355 18 12.202974907533063 22.638212571955687 43.59782869002954 21.560983830481714 19 13.6123750476748 28.592462503215277 46.95280416522534 10.842358283884588 20 15.428452320764926 23.221840823820546 48.792829710048515 12.55687714536601 21 19.624278225699157 23.662222931800645 44.50342815074993 12.210070691750264 22 17.5092910424594 25.567440994119366 42.76540450404903 14.1578634593722 23 14.857685177793744 27.68686304249488 43.17208163699742 14.283370142713961 24 12.116938523899488 30.327825230834733 44.61296931960299 12.942266925662791 25 12.156408823607673 29.251926948901485 44.35308622264797 14.238578004842871 26 14.223055976867743 28.853232573197452 43.997853525274294 12.92585792466051 27 11.72046158076333 31.531891115191186 43.780988620136064 12.96665868390942 28 11.756827474876488 31.07820441180384 45.84896623293685 11.316001880382817 29 11.32487161065432 32.46631719929397 45.448941397692096 10.759869792359614 30 10.504865047053919 33.5905555112069 45.13539643259448 10.769183009144692 31 10.034769342664289 34.39193564123715 43.86835546331036 11.7049395527882 32 8.75176285889146 35.48468641068625 44.3827998190575 11.380750911364785 33 9.417879602281294 35.35474486220874 44.58281223667988 10.644563298830082 34 9.961150581410818 36.198699697542196 41.70768916917236 12.132460551874617 35 9.22185856328109 36.59428966765121 42.17689790053484 12.006953868532857 36 9.197023318520884 37.15175221521513 40.2685754326211 13.382649033642888 37 9.276407404450831 37.52383740010467 40.65440869943145 12.545346496013057 38 9.636961939987405 36.22087402322096 40.58877269542233 13.55339134136931 39 9.994855556442529 36.757049218133275 40.849099278890925 12.398995946533265 40 9.315434217645441 37.08744667074674 40.769271706447405 12.827847405160409 41 8.990358603194878 38.55228262508537 39.28713977807935 13.170218993640404 42 9.087038663154253 37.847582555014505 39.56919720071313 13.496181581118119 43 8.484340491205662 38.94122029749075 38.26224244520724 14.312196766096344 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 13.0 1 79.5 2 146.0 3 826.5 4 1507.0 5 1507.0 6 2310.5 7 3114.0 8 3168.5 9 3223.0 10 4200.5 11 5178.0 12 5178.0 13 9307.0 14 13436.0 15 20173.5 16 26911.0 17 23110.5 18 19310.0 19 19310.0 20 20098.0 21 20886.0 22 14213.0 23 7540.0 24 7393.5 25 7247.0 26 7247.0 27 7364.0 28 7481.0 29 7431.0 30 7381.0 31 6957.0 32 6533.0 33 6533.0 34 6160.0 35 5787.0 36 5560.5 37 5334.0 38 5770.5 39 6207.0 40 6207.0 41 7070.5 42 7934.0 43 8326.0 44 8718.0 45 10429.5 46 12141.0 47 12141.0 48 12828.0 49 13515.0 50 11996.5 51 10478.0 52 7585.0 53 4692.0 54 4692.0 55 4543.5 56 4395.0 57 4017.5 58 3640.0 59 3217.0 60 2794.0 61 2794.0 62 2599.0 63 2404.0 64 2258.0 65 2112.0 66 1911.0 67 1710.0 68 1710.0 69 1509.0 70 1308.0 71 1139.0 72 970.0 73 808.5 74 647.0 75 647.0 76 508.5 77 370.0 78 299.0 79 228.0 80 166.0 81 104.0 82 104.0 83 77.5 84 51.0 85 36.5 86 22.0 87 17.0 88 12.0 89 12.0 90 7.5 91 3.0 92 3.0 93 3.0 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 225486.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.88281312365291 #Duplication Level Percentage of deduplicated Percentage of total 1 80.31701155744034 27.213662932510225 2 9.52867109069253 6.457163637653779 3 3.2172353765003074 3.2702695511029507 4 1.6583552571301423 2.2475896507987194 5 0.9777358935092472 1.6564221282030813 6 0.7355924660671981 1.495436523775312 7 0.48821350505883426 1.157943286944644 8 0.35601628250939127 0.9650266535394658 9 0.28140992918940855 0.8581464037678614 >10 2.009136006073219 13.287742919737811 >50 0.22774571013468412 5.269950240813177 >100 0.17408149107995968 11.801176126234001 >500 0.01570660069894373 3.6263892215037745 >1k 0.007853300349471865 3.7487914992505074 >5k 0.0026177667831572887 6.413701959323418 >10k+ 0.0026177667831572887 10.530587264841277 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12719 5.640704966161978 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11026 4.8898822986792965 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8943 3.966099890902318 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5519 2.4476020684210993 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 1877 0.8324241859805043 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 1477 0.6550295805504555 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1429 0.6337422278988496 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1392 0.6173332268965701 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1223 0.5423840061023745 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1055 0.46787827182175384 No Hit GTACATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAA 950 0.4213121878963661 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 910 0.4035727273533612 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 798 0.3539022378329475 No Hit CTTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGT 788 0.3494673726971963 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 745 0.330397452613466 No Hit GTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAAAAAAAAA 718 0.31842331674693775 No Hit TCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTCTT 602 0.26697888117222357 Illumina PCR Primer Index 10 (95% over 21bp) TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 571 0.25323079925139474 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 546 0.2421436364120167 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 539 0.23903923081699088 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 505 0.2239606893554367 No Hit ACGCAGAGTACATGGGAATGGTATCAACGCAAAAAAAAAAAAA 505 0.2239606893554367 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT 499 0.22129977027398598 No Hit GAGTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAA 470 0.2084386613803074 No Hit GTACATGGGAACATGGTATCAACGCAAAAAAAAAAAAAAAAAA 454 0.20134287716310548 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 447 0.1982384715680796 No Hit GAGTACATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAA 444 0.19690801202735425 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 439 0.19469057945947862 No Hit GTACATGGGAAGCATGGTATCAACGCAAAAAAAAAAAAAAAAA 433 0.1920296603780279 No Hit CCACTGTTCCCATGTACTCTGCGTTGATACCCTGTCTCTTATA 370 0.16409001002279522 No Hit GTACATGGGAAGAGTGGTATCAACGCAAAAAAAAAAAAAAAAA 368 0.16320303699564495 No Hit GTACATGGGAATGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 362 0.16054211791419423 No Hit ACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA 360 0.159655144887044 No Hit GGTATCAACGCAGAGTACATGGGAACAGTGGCTGTCTCTTATA 360 0.159655144887044 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTT 358 0.15876817185989373 No Hit ACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCC 353 0.15655073929201813 No Hit GTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 353 0.15655073929201813 No Hit GTACATGGGAAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 344 0.15255936066984202 No Hit GAAGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 342 0.15167238764269178 No Hit GTACATGGGAAGATGGTATCAACGCAAAAAAAAAAAAAAAAAA 337 0.14945495507481615 No Hit TATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAAAA 335 0.14856798204766591 No Hit GGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA 335 0.14856798204766591 No Hit ATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATG 334 0.1481244955340908 No Hit GAAGCAGAGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAA 323 0.14324614388476448 No Hit GAACATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA 298 0.13215898104538643 No Hit GAACAGTGGTATCAACGCAGAAAAAAAAAAAAAAAAAAAAAAA 284 0.1259501698553347 No Hit CATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTC 284 0.1259501698553347 No Hit TATCAACGCAGAGTACATGGGAATGGTATCAACGCAAAAAAAA 283 0.12550668334175957 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 277 0.12284576426030884 No Hit ACGCAGAGTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAA 267 0.11841089912455761 No Hit GAGTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAAAAAAA 267 0.11841089912455761 No Hit GTACATGGGAACTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 265 0.11752392609740737 No Hit CAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 263 0.11663695307025713 No Hit GAATGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 259 0.11486300701595664 No Hit CCCATGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTC 257 0.1139760339888064 No Hit ACGCAGAGTACATGGGAACAGTGGTATCAACGCAAAAAAAAAA 256 0.11353254747523127 No Hit GGTATCAACGCAGAGTACATGGGAATGGTATCAACGCAAAAAA 248 0.1099846553666303 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTG 245 0.10865419582590492 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAA 242 0.10732373628517956 No Hit CATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 231 0.10244538463585323 No Hit GTATCAACGCAGAGTACATGGGAATGGTATCAACGCAAAAAAA 228 0.10111492509512787 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0017739460543004888 0.0 3 0.0 0.0 0.0 0.0022174325678756108 0.0 4 0.0 0.0 0.0 0.0039913786221761 0.0 5 0.0 0.0 0.0 0.004878351649326344 0.0 6 0.0 0.0 0.0 0.004878351649326344 0.0 7 0.0 0.0 0.0 0.00620881119005171 0.0 8 0.0 0.0 0.0 0.006652297703626833 0.0 9 0.0 0.0 0.0 0.009313216785077566 0.0 10 4.434865135751222E-4 0.0 0.0 0.01640900100227952 0.0 11 8.869730271502444E-4 0.0 0.0 0.021730839165180985 0.0 12 8.869730271502444E-4 0.0 0.0 0.02882662338238294 0.0 13 8.869730271502444E-4 0.0 0.0 0.0319310289774088 0.0 14 8.869730271502444E-4 4.434865135751222E-4 0.0 0.03947029970818587 0.0 15 8.869730271502444E-4 8.869730271502444E-4 0.0 0.051887922088289296 0.0 16 8.869730271502444E-4 8.869730271502444E-4 0.0 0.09135822179647517 0.0 17 8.869730271502444E-4 8.869730271502444E-4 0.0 0.1321589810453864 0.0 18 8.869730271502444E-4 8.869730271502444E-4 0.0 0.15655073929201813 0.0 19 8.869730271502444E-4 8.869730271502444E-4 0.0 0.18936874129657716 0.0 20 8.869730271502444E-4 8.869730271502444E-4 0.0 0.2181953646789601 0.0 21 8.869730271502444E-4 8.869730271502444E-4 0.0 0.29314458547315575 0.0 22 8.869730271502444E-4 8.869730271502444E-4 0.0 0.42929494514071825 0.0 23 8.869730271502444E-4 8.869730271502444E-4 0.0 0.6652297703626833 0.0 24 8.869730271502444E-4 8.869730271502444E-4 0.0 0.9681310591344917 0.0 25 8.869730271502444E-4 8.869730271502444E-4 0.0 1.0315496305757341 0.0 26 8.869730271502444E-4 8.869730271502444E-4 0.0 1.150847502727442 0.0 27 8.869730271502444E-4 8.869730271502444E-4 0.0 1.2284576426030884 0.0 28 8.869730271502444E-4 8.869730271502444E-4 0.0 1.3011894308294085 0.0 29 8.869730271502444E-4 0.0013304595407253666 0.0 1.4235917085761423 0.0 30 8.869730271502444E-4 0.0013304595407253666 0.0 1.6759355348003868 0.0 31 8.869730271502444E-4 0.0013304595407253666 0.0 2.3748702801947794 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 20 0.0018387998 37.0 1 CTGTTTA 20 0.0018387998 37.0 17 ATGCCCC 25 1.2304803E-4 37.0 37 AGTGGCT 80 3.274181E-11 27.75 27 CCGTCTT 95 0.0 27.263159 37 GTGGCTG 90 1.4188117E-10 24.666666 28 CAGTGGC 75 1.3613317E-8 24.666666 26 GCCGTCT 110 3.6379788E-12 23.545454 36 TCTTTGC 65 2.666995E-6 22.76923 8 TGGGCAG 270 0.0 21.925926 6 GGCAGTC 235 0.0 21.255318 8 CTTTGCG 70 5.071968E-6 21.142857 9 GGGCAGT 255 0.0 21.039215 7 TATGCCG 115 1.3278623E-10 20.913044 33 TGCCGTC 115 1.3278623E-10 20.913044 35 TCCTCCG 80 6.909195E-7 20.8125 21 TTAAAAC 45 0.0038164183 20.555555 36 AGTCGGT 225 0.0 20.555555 11 CAGTCGG 240 0.0 20.041666 10 ATGCCGT 120 2.3464963E-10 20.041666 34 >>END_MODULE