##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630493.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1662511 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09534553455586 33.0 31.0 34.0 30.0 34.0 2 32.2569402548314 33.0 31.0 34.0 30.0 34.0 3 32.3610321976817 34.0 31.0 34.0 30.0 34.0 4 35.933927053715735 37.0 35.0 37.0 35.0 37.0 5 35.895455127815694 37.0 35.0 37.0 35.0 37.0 6 35.978301496952504 37.0 35.0 37.0 35.0 37.0 7 35.926058233599655 37.0 35.0 37.0 35.0 37.0 8 35.93727199398982 37.0 35.0 37.0 35.0 37.0 9 37.640784933152325 39.0 37.0 39.0 35.0 39.0 10 37.562758983248834 39.0 37.0 39.0 35.0 39.0 11 37.66157577303248 39.0 37.0 39.0 35.0 39.0 12 37.61147565339417 39.0 37.0 39.0 35.0 39.0 13 37.65485882499424 39.0 37.0 39.0 35.0 39.0 14 38.946089980758025 40.0 38.0 41.0 36.0 41.0 15 38.95621562804697 40.0 38.0 41.0 36.0 41.0 16 38.91129201551148 40.0 38.0 41.0 35.0 41.0 17 38.91936654855216 40.0 38.0 41.0 36.0 41.0 18 38.920398120674086 40.0 38.0 41.0 35.0 41.0 19 38.98336311759742 40.0 38.0 41.0 35.0 41.0 20 38.95731998164223 40.0 38.0 41.0 35.0 41.0 21 38.91734550929287 40.0 38.0 41.0 35.0 41.0 22 38.84217728484202 40.0 38.0 41.0 35.0 41.0 23 38.786303970319594 40.0 38.0 41.0 35.0 41.0 24 38.739061576133935 40.0 38.0 41.0 35.0 41.0 25 38.684150059759006 40.0 38.0 41.0 35.0 41.0 26 38.54319520291896 40.0 38.0 41.0 34.0 41.0 27 38.40728692922934 40.0 38.0 41.0 34.0 41.0 28 38.30463377385172 40.0 38.0 41.0 34.0 41.0 29 38.22689293484374 40.0 38.0 41.0 34.0 41.0 30 38.130035229842086 40.0 37.0 41.0 33.0 41.0 31 38.06102215263538 40.0 37.0 41.0 33.0 41.0 32 37.948705903299285 40.0 37.0 41.0 33.0 41.0 33 37.8496521226025 40.0 37.0 41.0 33.0 41.0 34 37.770894147467295 40.0 37.0 41.0 33.0 41.0 35 37.69098610475359 40.0 37.0 41.0 33.0 41.0 36 37.62589661060889 40.0 37.0 41.0 33.0 41.0 37 37.47007989721572 40.0 36.0 41.0 33.0 41.0 38 37.30291468748177 40.0 36.0 41.0 32.0 41.0 39 37.21170085491163 40.0 36.0 41.0 32.0 41.0 40 37.003467646229105 40.0 36.0 41.0 31.0 41.0 41 36.91829708194412 40.0 35.0 41.0 31.0 41.0 42 36.75213818134136 40.0 35.0 41.0 31.0 41.0 43 35.98707617573658 39.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 14.0 11 5.0 12 5.0 13 2.0 14 2.0 15 5.0 16 11.0 17 14.0 18 34.0 19 76.0 20 184.0 21 404.0 22 726.0 23 1218.0 24 2205.0 25 3577.0 26 5527.0 27 8306.0 28 12301.0 29 17279.0 30 23246.0 31 30341.0 32 38969.0 33 50062.0 34 66556.0 35 88929.0 36 124949.0 37 200008.0 38 356654.0 39 630898.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.68920807140524 19.437525526146896 12.179949486048514 23.69331691639935 2 18.624478274128712 21.178326038143506 34.858656574302366 25.338539113425412 3 20.724494454472783 24.0882616716521 29.33382094915462 25.853422924720498 4 13.916058299764632 15.386003461029732 34.518087399120965 36.17985084008467 5 13.842615176681539 38.166003112159856 33.920978567961356 14.070403143197248 6 34.537515842000445 34.557184884791745 15.998630986501745 14.906668286706074 7 28.530818743454933 31.13362858952512 21.740006532287605 18.59554613473234 8 28.09052090482409 32.683272471580636 20.085160338788736 19.14104628480654 9 26.75134179563323 13.174048171711345 20.919500683003 39.15510934965242 10 17.1782322041779 27.42051030038298 32.93391742971926 22.467340065719867 11 34.459020120769125 22.17663522226319 21.720277339518354 21.644067317449327 12 21.665420559623367 26.732695302467175 29.22085929055507 22.381024847354393 13 29.99312485751974 20.202753545690825 26.11970687712743 23.684414719662005 14 22.555459783423988 21.683706152921694 26.757477093384647 29.00335697026967 15 25.7153787253137 28.02826567764063 23.64706158335193 22.609294013693745 16 24.205734578598275 26.667492726363918 25.749363462858295 23.377409232179517 17 22.607609814311004 27.15482784775559 26.783040834015537 23.454521503917867 18 22.36580690293177 25.284825183111572 28.83722273115787 23.51214518279879 19 22.9636976838048 25.954113987817223 28.869342819385857 22.21284550899212 20 23.89367649296757 25.043683921489844 28.534427742132234 22.528211843410357 21 24.302876792995658 25.474778813493565 27.930642263419607 22.29170213009117 22 24.040081539310115 25.476102113008576 27.967333749972177 22.51648259770913 23 23.267334772521806 25.614627512239018 27.942130909209023 23.175906806030156 24 22.84442027751997 26.359705289168012 28.016656731895306 22.779217701416712 25 23.13578677073415 26.11122573023577 27.81725955497437 22.93572794405571 26 22.950284238720826 26.54388452166632 27.929860313706197 22.575970925906656 27 23.105771931734587 25.95140723880925 27.84468794492187 23.098132884534298 28 22.48640760873161 26.196819148865778 28.46399211794689 22.852781124455717 29 22.368393351983837 26.694139166597996 28.62651735838139 22.31095012303678 30 22.40418258886708 26.94737057378869 28.161678328744895 22.48676850859934 31 22.428603479916827 27.14556475115052 27.83765039750113 22.588181371431524 32 21.78596111544525 26.73281560242308 28.07247591143758 23.408747370694087 33 21.6473154162589 26.72024425703048 28.577434976370082 23.055005350340537 34 22.89043501065557 26.034474358365145 28.210339660910517 22.86475097006877 35 22.33067931580603 26.20060859747695 28.447631323943117 23.021080762773902 36 21.74920947891473 26.88331084726657 28.17882107246208 23.188658601356625 37 22.33988226243315 25.7422657654596 28.641434552914234 23.276417419193017 38 21.97633579567293 25.739679316407532 28.808471041695366 23.475513846224175 39 21.945659306915864 25.67459704026018 29.110905130853272 23.26883852197068 40 21.352339924367417 25.584372073327632 29.674510424291928 23.388777578013016 41 20.77706553520548 25.830986982943273 29.89598264312236 23.495964838728884 42 21.0156804977531 25.80638564195966 30.022778796651572 23.155155063635668 43 20.80455407513093 25.376433599537084 29.784945783817367 24.034066541514612 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 524.0 1 489.5 2 455.0 3 1247.5 4 2040.0 5 2040.0 6 2801.0 7 3562.0 8 3530.0 9 3498.0 10 5052.0 11 6606.0 12 6606.0 13 11114.5 14 15623.0 15 20664.0 16 25705.0 17 24062.5 18 22420.0 19 22420.0 20 25649.5 21 28879.0 22 26179.5 23 23480.0 24 26070.0 25 28660.0 26 28660.0 27 32293.5 28 35927.0 29 40114.0 30 44301.0 31 49303.0 32 54305.0 33 54305.0 34 59775.0 35 65245.0 36 70689.0 37 76133.0 38 81860.5 39 87588.0 40 87588.0 41 90895.5 42 94203.0 43 95497.0 44 96791.0 45 99392.0 46 101993.0 47 101993.0 48 105035.5 49 108078.0 50 107052.0 51 106026.0 52 104600.5 53 103175.0 54 103175.0 55 101208.5 56 99242.0 57 95280.0 58 91318.0 59 88751.5 60 86185.0 61 86185.0 62 79008.0 63 71831.0 64 64687.0 65 57543.0 66 49891.5 67 42240.0 68 42240.0 69 36648.0 70 31056.0 71 26241.5 72 21427.0 73 16568.0 74 11709.0 75 11709.0 76 8687.0 77 5665.0 78 4562.5 79 3460.0 80 2857.0 81 2254.0 82 2254.0 83 1781.0 84 1308.0 85 1120.5 86 933.0 87 814.0 88 695.0 89 695.0 90 535.5 91 376.0 92 205.0 93 34.0 94 21.5 95 9.0 96 9.0 97 8.0 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1662511.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.0914720565623 #Duplication Level Percentage of deduplicated Percentage of total 1 87.73178580994818 54.47395727090707 2 7.813618143726314 9.703181052636612 3 1.7943500353678272 3.34241505242199 4 0.7213038303119772 1.7914726649642998 5 0.39108323962746194 1.2141467022559205 6 0.2503752202775213 0.9327699596110408 7 0.17694720593043206 0.7690838744761339 8 0.13778456481538678 0.6844197164848149 9 0.1083905046219505 0.6057113390037475 >10 0.6982926349913706 8.668035080345101 >50 0.0910586388274722 3.968092518057589 >100 0.0793753988278246 9.416257881936598 >500 0.004371806425564222 1.7308376147890083 >1k 8.743612851128443E-4 0.6545006838065291 >5k 1.9430250780285427E-4 0.8034372910248077 >10k+ 1.9430250780285427E-4 1.2416812972786724 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10426 0.6271236701591748 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10158 0.6110034760672259 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7480 0.4499218351036474 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5839 0.3512157212794382 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1683 0.10123241289832068 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 6.014997795503308E-5 0.0 2 0.0 0.0 0.0 4.2104984568523153E-4 0.0 3 0.0 0.0 0.0 6.014997795503308E-4 0.0 4 0.0 0.0 0.0 0.0010826996031905955 0.0 5 0.0 0.0 0.0 0.0012029995591006616 0.0 6 0.0 0.0 0.0 0.0012631495370556947 0.0 7 0.0 0.0 0.0 0.0013834494929657608 0.0 8 0.0 0.0 0.0 0.001443599470920794 0.0 9 0.0 0.0 0.0 0.0026465990300214553 0.0 10 0.0 0.0 0.0 0.0034285487434368854 0.0 11 0.0 0.0 0.0 0.00469169828049258 0.0 12 0.0 0.0 0.0 0.006075147773458341 0.0 13 0.0 0.0 0.0 0.007157847376648936 0.0 14 0.0 0.0 0.0 0.00878189678143483 0.0 15 0.0 0.0 0.0 0.010706696075995888 0.0 16 0.0 0.0 0.0 0.016300644025813965 0.0 17 0.0 0.0 0.0 0.025563740630889058 0.0 18 0.0 0.0 0.0 0.028811839440460844 0.0 19 0.0 0.0 0.0 0.03458623732414402 0.0 20 0.0 0.0 0.0 0.03843583591326614 0.0 21 0.0 0.0 0.0 0.047398182628566064 0.0 22 0.0 0.0 0.0 0.06778902515532229 0.0 23 0.0 0.0 0.0 0.1002098632730851 0.0 24 0.0 0.0 0.0 0.1519989942923686 0.0 25 0.0 0.0 0.0 0.16324704016995978 0.0 26 0.0 0.0 0.0 0.18387848260853612 0.0 27 0.0 0.0 0.0 0.2049309748927977 0.0 28 0.0 0.0 0.0 0.2505848081606678 0.0 29 0.0 0.0 0.0 0.3251707808249088 0.0 30 0.0 0.0 0.0 0.43723018975513545 0.0 31 0.0 0.0 0.0 0.7961451082128178 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 40 0.0019315481 23.125 5 CGTTATA 45 0.0038265155 20.555557 2 ATACGAC 50 0.0070361695 18.5 6 CGCAAGT 50 0.0070361695 18.5 12 CGGTTTA 85 2.7242999E-5 17.411764 15 CGACCCG 175 7.2759576E-12 16.914286 5 TATCCGG 70 0.002593146 15.857143 10 TACGTTA 130 2.5907866E-7 15.653846 19 GGTATCA 5670 0.0 15.563492 1 TAAACCG 75 0.004105432 14.799999 5 CGTAGTA 75 0.004105432 14.799999 2 ACCGTGT 150 8.107236E-8 14.799999 8 GCTTTAT 530 0.0 14.6603775 1 TATTAGA 305 0.0 14.557377 2 ACGTTAA 140 5.9989725E-7 14.535715 20 GTCGGTT 205 9.276846E-11 14.439024 12 AAGACGG 245 0.0 14.34694 5 TTAACGG 105 1.6563335E-4 14.095238 35 TATACTG 185 4.9021764E-9 14.0 5 GTATAGA 225 2.7284841E-11 13.9777775 1 >>END_MODULE