ERR1630454.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630454.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	196607
Sequences flagged as poor quality	0
Sequence length	43
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG	601	0.30568596235128964	No Hit
CTGTAGAACAGAGCAGGTGAAGAGAGAGCAAGCCCTCTTTGGG	415	0.21108098897801197	No Hit
GGTGAAGAGAGAGCAAGCCCTCTTTGGGAACTTTTGATGTGCT	381	0.1937876067484881	No Hit
TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA	263	0.1337693978342582	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	218	0.11088109782459424	No Hit
CGCCTGGAGTCCAGATACTTGCTGTAGTCACTGGTGAATGTGC	216	0.10986384004638697	No Hit
CAGTGATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAG	214	0.10884658226817967	No Hit
ATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAGGGCAC	208	0.10579480893355782	No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT	203	0.10325166448803959	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTAG	25	1.2299066E-4	37.0	1
TCTAGGC	25	0.0054854047	29.6	3
TCGACAA	25	0.0054854047	29.6	31
AGGCCCG	40	5.9154965E-5	27.75	10
TAAATCA	35	8.8431593E-4	26.42857	4
TCTTATA	130	0.0	24.192308	37
CCAGAAC	40	0.001925529	23.125	3
TGCGTAC	40	0.001925529	23.125	16
TACAAAG	40	0.001925529	23.125	7
GTACCGG	45	0.0038147073	20.555553	6
GGATATA	45	0.0038147073	20.555553	2
TGTACCG	45	0.0038147073	20.555553	5
GTGCGTA	45	0.0038147073	20.555553	15
GCGTACT	45	0.0038147073	20.555553	17
TGTCCGA	45	0.0038147073	20.555553	12
GTTCCTC	65	6.8650086E-5	19.923077	11
ATGAATA	75	9.201873E-6	19.733332	35
GAGGTCG	85	1.234599E-6	19.588234	9
TTTGATG	85	1.234599E-6	19.588234	33
TCGCCTT	80	1.6055916E-5	18.5	14