##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630454.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 196607 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80835372087464 31.0 31.0 34.0 30.0 34.0 2 32.00901799020381 33.0 31.0 34.0 30.0 34.0 3 32.15164261699736 34.0 31.0 34.0 30.0 34.0 4 35.81657316372255 37.0 35.0 37.0 35.0 37.0 5 35.71847899617003 37.0 35.0 37.0 35.0 37.0 6 35.788761336066365 37.0 35.0 37.0 35.0 37.0 7 35.76708865910166 37.0 35.0 37.0 35.0 37.0 8 35.731393083664365 37.0 35.0 37.0 33.0 37.0 9 37.46852350119782 39.0 37.0 39.0 35.0 39.0 10 37.36183350541944 39.0 37.0 39.0 34.0 39.0 11 37.44032002929703 39.0 37.0 39.0 35.0 39.0 12 37.31880350140127 39.0 37.0 39.0 34.0 39.0 13 37.35210343477089 39.0 37.0 39.0 34.0 39.0 14 38.56371848408246 40.0 38.0 41.0 34.0 41.0 15 38.5611397356147 40.0 38.0 41.0 34.0 41.0 16 38.53477241400357 40.0 38.0 41.0 34.0 41.0 17 38.48052714298067 40.0 38.0 41.0 34.0 41.0 18 38.448422487500444 40.0 38.0 41.0 34.0 41.0 19 38.46008534792759 40.0 38.0 41.0 34.0 41.0 20 38.40220338034759 40.0 38.0 41.0 34.0 41.0 21 38.35275956603783 40.0 38.0 41.0 34.0 41.0 22 38.33365037867421 40.0 38.0 41.0 34.0 41.0 23 38.28083944111858 40.0 38.0 41.0 34.0 41.0 24 38.26581454373446 40.0 38.0 41.0 34.0 41.0 25 38.22178762709365 40.0 38.0 41.0 34.0 41.0 26 38.05652901473498 40.0 38.0 41.0 33.0 41.0 27 37.95395382666945 40.0 37.0 41.0 33.0 41.0 28 37.862187002497365 40.0 37.0 41.0 33.0 41.0 29 37.799106847670735 40.0 37.0 41.0 33.0 41.0 30 37.74560417482592 40.0 37.0 41.0 32.0 41.0 31 37.6480745853403 40.0 37.0 41.0 32.0 41.0 32 37.55649086756829 40.0 37.0 41.0 32.0 41.0 33 37.50181326198965 40.0 37.0 41.0 32.0 41.0 34 37.405021184393235 40.0 37.0 41.0 31.0 41.0 35 37.31620440777795 39.0 37.0 41.0 31.0 41.0 36 37.236181824655276 39.0 36.0 41.0 31.0 41.0 37 37.18164154887669 39.0 36.0 41.0 31.0 41.0 38 37.0651451881164 39.0 36.0 41.0 31.0 41.0 39 36.974024322633475 39.0 36.0 41.0 31.0 41.0 40 36.88942407950887 39.0 36.0 41.0 30.0 41.0 41 36.78777459602151 39.0 35.0 40.0 30.0 41.0 42 36.74707411231543 39.0 35.0 40.0 30.0 41.0 43 35.44945500414533 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 12.0 18 9.0 19 11.0 20 50.0 21 47.0 22 108.0 23 235.0 24 344.0 25 500.0 26 804.0 27 1121.0 28 1596.0 29 2295.0 30 3033.0 31 4112.0 32 5395.0 33 6874.0 34 9337.0 35 12743.0 36 17493.0 37 25944.0 38 47694.0 39 56850.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.74364595360287 17.728259929707487 12.335776447430662 27.19231766925898 2 19.46777073044195 20.11322079071447 33.17735380734155 27.24165467150203 3 20.366517977488087 21.32019714455742 29.631701821400053 28.681583056554445 4 15.634234793267787 14.808221477363471 32.99221289170782 36.56533083766092 5 15.385006637607002 36.11519427080419 33.757699369808805 14.742099721779997 6 37.28300620018616 33.662585767546425 14.54983800169882 14.504570030568598 7 31.142329622037874 29.39976704796879 19.816181519477944 19.641721810515396 8 28.10988418520195 33.26127757404365 19.386390108185363 19.242448132569034 9 27.118057851449844 13.84335247473386 17.86152069865264 41.17706897516365 10 17.486661207383257 26.86781243801085 31.636208273357507 24.00931808124838 11 38.29263454505689 20.24699018854873 19.829405870594638 21.63096939579974 12 22.668572329571173 24.397910552523562 27.40187277156968 25.531644346335586 13 31.881367397905464 17.62653415188676 24.081034754611995 26.411063695595782 14 23.918273510098825 19.220577090337578 22.646701287339717 34.21444811222388 15 27.061091415870237 26.693861357937408 20.366009348598983 25.87903787759337 16 27.19231766925898 24.8917892038432 21.60299480689904 26.31289831999878 17 26.04383363766295 25.199509681750904 22.845575182979243 25.9110814976069 18 25.16950057729379 23.59478553662891 24.78548576602054 26.450228120056764 19 26.75133642240612 24.06119822793695 23.80535789671782 25.382107452939113 20 26.805251084651104 23.008845056381514 24.345013148056783 25.840890710910596 21 26.739637957956734 23.923868427878965 23.218908787581316 26.11758482658298 22 26.87137284023458 23.20721032313193 23.36081624764123 26.560600588992255 23 25.9944966354199 23.67870930333101 23.639036249980926 26.687757811268163 24 26.435986511161865 24.256003092463647 23.51543942992874 25.792570966445755 25 27.018875218074633 23.610553032191124 23.373531969868825 25.997039779865418 26 27.126704542564607 23.94573947011042 23.02969884083476 25.897857146490207 27 26.958348380271303 23.06123383195919 23.49204250102997 26.488375286739537 28 25.98178091319231 23.49000798547356 24.138509819080703 26.38970128225343 29 25.4227977640674 24.25244269023992 24.069336290162607 26.25542325553007 30 25.44314291963155 25.266140066223482 23.524086121043503 25.766630893101468 31 26.740146586845842 23.902506014536616 23.295711749835966 26.06163564878158 32 25.584033121913258 23.79772846338126 23.869445136744876 26.7487932779606 33 25.536222006337518 23.37861825875986 23.952860274557874 27.13229946034475 34 26.172516746606174 23.6075012588565 24.215821410224457 26.004160584312867 35 26.332734846673823 23.46915420102031 24.382651685850455 25.815459266455417 36 25.398892206279534 24.367392819177343 24.27024470135855 25.963470273184576 37 26.8459413957794 22.929498949681342 24.193441739103896 26.03111791543536 38 25.673043177506393 23.245357489814705 25.45840178630466 25.62319754637424 39 25.94872003540057 22.765211818500866 25.121180832828944 26.16488731326962 40 24.84702986160208 22.628390647331987 26.223379635516537 26.301199855549395 41 24.469118596998072 22.787082860732326 26.656731449032844 26.08706709323676 42 25.206630486198357 22.38170563611672 26.448193604500347 25.963470273184576 43 24.19547625466031 21.960560915938903 26.973607246944415 26.870355582456373 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1.0 1 2.5 2 4.0 3 7.0 4 10.0 5 10.0 6 13.0 7 16.0 8 14.0 9 12.0 10 14.5 11 17.0 12 17.0 13 36.0 14 55.0 15 102.0 16 149.0 17 168.0 18 187.0 19 187.0 20 251.0 21 315.0 22 380.0 23 445.0 24 600.0 25 755.0 26 755.0 27 927.5 28 1100.0 29 1728.5 30 2357.0 31 2721.0 32 3085.0 33 3085.0 34 3807.0 35 4529.0 36 5190.5 37 5852.0 38 7279.5 39 8707.0 40 8707.0 41 9561.5 42 10416.0 43 10517.5 44 10619.0 45 11998.0 46 13377.0 47 13377.0 48 15043.0 49 16709.0 50 17292.5 51 17876.0 52 19204.5 53 20533.0 54 20533.0 55 18275.0 56 16017.0 57 15133.0 58 14249.0 59 13220.5 60 12192.0 61 12192.0 62 11498.5 63 10805.0 64 9706.0 65 8607.0 66 7396.5 67 6186.0 68 6186.0 69 5225.5 70 4265.0 71 3667.5 72 3070.0 73 2430.0 74 1790.0 75 1790.0 76 1391.5 77 993.0 78 798.5 79 604.0 80 478.5 81 353.0 82 353.0 83 259.0 84 165.0 85 124.0 86 83.0 87 66.0 88 49.0 89 49.0 90 43.0 91 37.0 92 23.5 93 10.0 94 7.5 95 5.0 96 5.0 97 2.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 196607.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.96106257456337 #Duplication Level Percentage of deduplicated Percentage of total 1 87.0487519012186 52.1953565978661 2 6.762176692936035 8.109345996507832 3 2.001078252458463 3.599603349367795 4 0.8973825231442547 2.152320384942889 5 0.5988360885221762 1.7953424087892487 6 0.40424410033919544 1.4543343477501942 7 0.2926753846092594 1.2284388935413142 8 0.23592151686152243 1.1316883868175724 9 0.18316062723384405 0.9884255247688319 >10 1.3776814568589966 16.347757716412424 >50 0.15031060215309677 6.238517372162845 >100 0.04678541921321555 4.400148303442833 >500 9.954344513450118E-4 0.3587207176301062 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 601 0.30568596235128964 No Hit CTGTAGAACAGAGCAGGTGAAGAGAGAGCAAGCCCTCTTTGGG 415 0.21108098897801197 No Hit GGTGAAGAGAGAGCAAGCCCTCTTTGGGAACTTTTGATGTGCT 381 0.1937876067484881 No Hit TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA 263 0.1337693978342582 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 218 0.11088109782459424 No Hit CGCCTGGAGTCCAGATACTTGCTGTAGTCACTGGTGAATGTGC 216 0.10986384004638697 No Hit CAGTGATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAG 214 0.10884658226817967 No Hit ATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAGGGCAC 208 0.10579480893355782 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 203 0.10325166448803959 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 5.086288891036433E-4 0.0 18 0.0 0.0 0.0 5.086288891036433E-4 0.0 19 0.0 0.0 0.0 5.086288891036433E-4 0.0 20 0.0 0.0 0.0 0.0010172577782072865 0.0 21 0.0 0.0 0.0 0.002034515556414573 0.0 22 0.0 0.0 0.0 0.0025431444455182167 0.0 23 0.0 0.0 0.0 0.00305177333462186 0.0 24 0.0 0.0 0.0 0.00457766000193279 0.0 25 0.0 0.0 0.0 0.005594917780140076 0.0 26 0.0 0.0 0.0 0.009663948892969223 0.0 27 0.0 0.0 0.0 0.01729338222952387 0.0 28 0.0 0.0 0.0 0.04119894001739511 0.0 29 0.0 0.0 0.0 0.08646691114761937 0.0 30 0.0 0.0 0.0 0.13427802672336184 0.0 31 0.0 0.0 0.0 0.2782200023396929 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAG 25 1.2299066E-4 37.0 1 TCTAGGC 25 0.0054854047 29.6 3 TCGACAA 25 0.0054854047 29.6 31 AGGCCCG 40 5.9154965E-5 27.75 10 TAAATCA 35 8.8431593E-4 26.42857 4 TCTTATA 130 0.0 24.192308 37 CCAGAAC 40 0.001925529 23.125 3 TGCGTAC 40 0.001925529 23.125 16 TACAAAG 40 0.001925529 23.125 7 GTACCGG 45 0.0038147073 20.555553 6 GGATATA 45 0.0038147073 20.555553 2 TGTACCG 45 0.0038147073 20.555553 5 GTGCGTA 45 0.0038147073 20.555553 15 GCGTACT 45 0.0038147073 20.555553 17 TGTCCGA 45 0.0038147073 20.555553 12 GTTCCTC 65 6.8650086E-5 19.923077 11 ATGAATA 75 9.201873E-6 19.733332 35 GAGGTCG 85 1.234599E-6 19.588234 9 TTTGATG 85 1.234599E-6 19.588234 33 TCGCCTT 80 1.6055916E-5 18.5 14 >>END_MODULE