FastQCFastQC Report
Fri 10 Feb 2017
ERR1630443.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630443.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1740
Sequences flagged as poor quality0
Sequence length43
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT80.45977011494252873No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT60.3448275862068966No Hit
GGATCACTGAGTGGGTCTGCCTGGGAAGCTGAGAATGATCTGG30.1724137931034483No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.1724137931034483No Hit
CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGC30.1724137931034483No Hit
ATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAGGGCAC30.1724137931034483No Hit
GGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCG20.11494252873563218No Hit
AATGTGCCCTGTGAATGGCGCTTGTCCTCGTTCATCTGATCAG20.11494252873563218No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT20.11494252873563218No Hit
ACGCAGAGTACATGGGAATGGTATCAACGCAAAAAAAAAAAAA20.11494252873563218No Hit
CTTCTATTCTCCTATTATTATAATGCAGATATGTCAGATCGGA20.11494252873563218No Hit
TAACTATATCACTATTCAAGATCATCTTCACAACATCACCTGC20.11494252873563218No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11494252873563218No Hit
CGTCACGATGAATTTGAGAGACATGCTGAAGGGACCTTTACCA20.11494252873563218No Hit
GGAATAACATTGCCAAACGTCACGATGAATTTGAGAGACATGC20.11494252873563218No Hit
ATTACAAATAATCCAGCCACAAAGTAAATGCTTTTCATTTCTG20.11494252873563218No Hit
GTTGTGAGCCCATGCAGCTCTCCAGACTCACTGGTTTTCCCAG20.11494252873563218No Hit
GCCTGGAGTCCAGATACTTGCTGTAGTCACTGGTGAATGTGCC20.11494252873563218No Hit
ACATTGCTTTGCATGCCAATAAATAAATTTTCTTTTAGTGTTG20.11494252873563218No Hit
GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA20.11494252873563218No Hit
CTTTATAAACTGGTTGATTCAGACCAAAATCACTGACAGGAAA20.11494252873563218No Hit
TTCACCAGCCAAGCAATGAATTCCTTGGCAGCTTGGCCTTCCA20.11494252873563218No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGC20.11494252873563218No Hit
GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTG20.11494252873563218No Hit
GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC20.11494252873563218No Hit
CTATATCACTATTCAAGATCATCTTCACAACATCACCTGCTAG20.11494252873563218No Hit
GCTCTGTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAA20.11494252873563218No Hit
TAGTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCA20.11494252873563218No Hit
GAGAGCAAGCCCTCTTTGGGAACTTTTGATGTGCTCTGTGTCC20.11494252873563218No Hit
GTACAAGGCAGCTGGCAACGTTCCCTTCAAGACACAGAGGAGA20.11494252873563218No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC20.11494252873563218No Hit
GTCTTGAAGGGAACGTTGCCAGCTGCCTTGTACCAGCATTACA20.11494252873563218No Hit
CGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATT20.11494252873563218No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC20.11494252873563218No Hit
TAGTAAGGGTGGGGAAGCGAGGTTGACCTGTTAGGGTGAGAAG20.11494252873563218No Hit
CTACAGGAGGAAACGCGAGCGTGGTGGGACTGGCTCCAGGCAC20.11494252873563218No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)