FastQCFastQC Report
Fri 10 Feb 2017
ERR1630428.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630428.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4770
Sequences flagged as poor quality0
Sequence length43
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT190.3983228511530398No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT180.37735849056603776No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT110.23060796645702308No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTC70.14675052410901468No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG70.14675052410901468No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGT60.12578616352201258No Hit
GGAATAACATTGCCAAACGTCACGATGAATTTGAGAGACATGC50.10482180293501049No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.10482180293501049No Hit
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC50.10482180293501049No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)