##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630401.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2472019 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.874990847562255 33.0 31.0 34.0 30.0 34.0 2 32.0712089996072 33.0 31.0 34.0 30.0 34.0 3 32.20996238297521 34.0 31.0 34.0 30.0 34.0 4 35.85207840231001 37.0 35.0 37.0 35.0 37.0 5 35.76861100177628 37.0 35.0 37.0 35.0 37.0 6 35.818606976726315 37.0 35.0 37.0 35.0 37.0 7 35.798368054614464 37.0 35.0 37.0 35.0 37.0 8 35.77722460871053 37.0 35.0 37.0 35.0 37.0 9 37.49123166124532 39.0 37.0 39.0 35.0 39.0 10 37.40618700746232 39.0 37.0 39.0 34.0 39.0 11 37.49077333143475 39.0 37.0 39.0 35.0 39.0 12 37.36817799539567 39.0 37.0 39.0 34.0 39.0 13 37.399699597778174 39.0 37.0 39.0 34.0 39.0 14 38.644813005078035 40.0 38.0 41.0 34.0 41.0 15 38.63631104777107 40.0 38.0 41.0 34.0 41.0 16 38.62743732956745 40.0 38.0 41.0 34.0 41.0 17 38.59560788165463 40.0 38.0 41.0 34.0 41.0 18 38.524084564074954 40.0 38.0 41.0 34.0 41.0 19 38.53804157654128 40.0 38.0 41.0 34.0 41.0 20 38.48703145081004 40.0 38.0 41.0 34.0 41.0 21 38.460188615055145 40.0 38.0 41.0 34.0 41.0 22 38.42473702669761 40.0 38.0 41.0 34.0 41.0 23 38.37840485853871 40.0 38.0 41.0 34.0 41.0 24 38.355447510718975 40.0 38.0 41.0 34.0 41.0 25 38.332410066427485 40.0 38.0 41.0 34.0 41.0 26 38.15758657194787 40.0 38.0 41.0 33.0 41.0 27 38.07230041516671 40.0 38.0 41.0 33.0 41.0 28 37.98634395609419 40.0 37.0 41.0 33.0 41.0 29 37.912791123369196 40.0 37.0 41.0 33.0 41.0 30 37.86152816786603 40.0 37.0 41.0 33.0 41.0 31 37.775248086685416 40.0 37.0 41.0 33.0 41.0 32 37.68458778027192 40.0 37.0 41.0 33.0 41.0 33 37.617266695765686 40.0 37.0 41.0 32.0 41.0 34 37.51453852094179 40.0 37.0 41.0 32.0 41.0 35 37.413069640645965 40.0 37.0 41.0 32.0 41.0 36 37.31996315562299 40.0 36.0 41.0 31.0 41.0 37 37.24470887966476 40.0 36.0 41.0 31.0 41.0 38 37.14896608804382 39.0 36.0 41.0 31.0 41.0 39 37.06147040131973 39.0 36.0 41.0 31.0 41.0 40 36.94513108515752 39.0 36.0 41.0 31.0 41.0 41 36.80461881563208 39.0 35.0 41.0 30.0 41.0 42 36.75415358862533 39.0 35.0 41.0 30.0 41.0 43 35.56846245922867 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 5.0 10 8.0 11 5.0 12 6.0 13 3.0 14 2.0 15 12.0 16 16.0 17 62.0 18 93.0 19 197.0 20 426.0 21 805.0 22 1550.0 23 2549.0 24 4166.0 25 6559.0 26 9787.0 27 14204.0 28 20210.0 29 27996.0 30 37630.0 31 49564.0 32 64333.0 33 84129.0 34 113731.0 35 152454.0 36 209127.0 37 317974.0 38 580431.0 39 773982.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.23409326546439 17.648043967299603 11.727053877822136 27.390808889413876 2 18.53590122082395 19.338119973996964 35.05037784903757 27.075600956141514 3 19.870882869427785 22.047241546282613 29.05321520587018 29.028660378419424 4 14.64365767415218 14.607654714628001 33.616893721286125 37.1317938899337 5 14.814368336165701 36.777508587110376 33.52607726720547 14.882045809518454 6 36.4018237723901 33.87627684091425 15.17909045197468 14.542808934720972 7 31.10639521783611 29.503333105449432 20.43956781885576 18.9507038578587 8 28.554594442842063 33.80447318568344 18.62109474077667 19.019837630697822 9 27.665038173250288 13.652726779203558 18.190475073209388 40.491759974336766 10 17.805647933935784 26.39126155583756 31.74421394010321 24.05887657012345 11 37.183977954861994 21.263995139195938 20.438677858058536 21.11334904788353 12 23.14614086704026 24.220930340745763 28.31305099192199 24.31987780029199 13 30.56101106019007 18.427002381454187 24.46850125342888 26.54348530492686 14 23.108802966320244 19.18249819277279 24.797260862477188 32.911437978429774 15 26.060883836248834 26.44105890771875 21.278274964715077 26.21978229131734 16 25.426584504407124 25.200170387039904 22.656379259220905 26.716865849332066 17 24.130882489171807 26.213714376790794 24.888562749719966 24.766840384317433 18 24.51162389933087 24.182985648573087 25.798507212120942 25.506883239975096 19 25.354416774304728 23.995891617337893 25.363275929513485 25.286415678843895 20 24.909153206346716 24.98099731434103 25.169628550589618 24.940220928722635 21 26.94012465114548 24.02772794222051 24.324408509805142 24.707738896828868 22 26.126821840770642 24.48569367792076 24.637755615956024 24.749728865352573 23 25.25834146096774 24.716476693747094 24.697140272789163 25.328041572496 24 25.560240435045202 24.593702556493298 24.82687228536674 25.019184723094767 25 25.437992183717036 24.18945809073474 25.331884585029485 25.04066514051874 26 25.919986860942412 24.740101107637116 25.235930629983024 24.103981401437448 27 26.210073628074866 24.410491990555087 24.192856122869603 25.186578258500443 28 24.883667965335217 23.916644653621187 25.814526506471026 25.385160874572566 29 24.90984090332639 23.956167003570766 26.017316209948227 25.11667588315462 30 24.53075805647125 24.804016473983413 25.4825711291054 25.182654340439942 31 24.805310962415742 24.606768799107126 25.48026532158531 25.107654916891818 32 24.369756057700204 24.4678135564492 25.512101646467926 25.650328739382665 33 25.045034038977853 24.735853567468535 25.071045165914985 25.14806722763862 34 25.64151003693742 24.806443639794033 24.98961375296873 24.562432570299826 35 25.884307523526317 24.507457264689307 25.602149498041882 24.006085713742493 36 25.308988320882648 24.98981601678628 24.14892442169741 25.55227124063367 37 24.782536056559437 24.365913045166725 25.439731652547977 25.411819245725866 38 25.447215413797387 24.364861273315455 25.531478520189367 24.65644479269779 39 24.092897344235624 24.70292501797114 25.711210148465685 25.49296748932755 40 24.935083427756826 23.55710049154153 26.75096752897126 24.756848551730386 41 23.60082992889618 23.865391002253624 26.986402612601278 25.547376456248923 42 23.888044549819398 24.620482285937122 25.965900747526614 25.525572416716862 43 24.031247332645904 22.742948173132973 27.344207305849995 25.881597188371124 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 459.0 1 358.0 2 257.0 3 645.5 4 1034.0 5 1034.0 6 1339.5 7 1645.0 8 1524.0 9 1403.0 10 1960.5 11 2518.0 12 2518.0 13 4757.5 14 6997.0 15 10379.5 16 13762.0 17 12995.0 18 12228.0 19 12228.0 20 14584.5 21 16941.0 22 16095.5 23 15250.0 24 18726.0 25 22202.0 26 22202.0 27 26845.0 28 31488.0 29 37520.5 30 43553.0 31 50739.0 32 57925.0 33 57925.0 34 68338.5 35 78752.0 36 89798.0 37 100844.0 38 109326.0 39 117808.0 40 117808.0 41 128322.5 42 138837.0 43 143837.0 44 148837.0 45 154104.0 46 159371.0 47 159371.0 48 161353.0 49 163335.0 50 169003.5 51 174672.0 52 179530.0 53 184388.0 54 184388.0 55 187900.5 56 191413.0 57 178385.0 58 165357.0 59 151495.5 60 137634.0 61 137634.0 62 130979.5 63 124325.0 64 108272.0 65 92219.0 66 78727.0 67 65235.0 68 65235.0 69 56385.0 70 47535.0 71 43145.0 72 38755.0 73 41960.5 74 45166.0 75 45166.0 76 42499.0 77 39832.0 78 30282.0 79 20732.0 80 12839.0 81 4946.0 82 4946.0 83 3374.5 84 1803.0 85 1469.5 86 1136.0 87 953.5 88 771.0 89 771.0 90 646.5 91 522.0 92 307.5 93 93.0 94 62.0 95 31.0 96 31.0 97 17.0 98 3.0 99 4.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2472019.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.01794169766721 #Duplication Level Percentage of deduplicated Percentage of total 1 79.01708773318795 35.5718664869211 2 11.75978595963402 10.588027174156995 3 3.6185059274649376 4.886930666258394 4 1.6358427699683358 2.945690977799399 5 0.8814105543030347 1.9839644472661278 6 0.5680775005483362 1.5344207879664906 7 0.36133094559588186 1.1386462809678861 8 0.28743356267191256 1.0351733893053545 9 0.21338086785565058 0.8645370721670977 >10 1.3357814317783192 11.910815648369075 >50 0.16997335666016816 5.32157126315203 >100 0.13216650465967594 11.43355192926261 >500 0.01218351908788417 3.7792499666129165 >1k 0.006678373425951305 5.725002424671041 >5k 2.7074486861964757E-4 0.748122562488149 >10k+ 9.024828953988251E-5 0.5324289226353424 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 13105 0.5301334658026495 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6523 0.26387337637777053 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5996 0.2425547700078357 No Hit GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT 5895 0.2384690408932941 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4715 0.19073477995112498 No Hit CTCCAGGGCCAAGGGCTGCAGGCTGCCTGCACCAGGGCCCCCG 4248 0.17184333939180887 No Hit CTTCTACACACCCAAGACCCGCCGGGAGGCAGAGGACCTGCAG 4066 0.16448093643293193 No Hit AGGTAGAGAGCTTCCACCAGGTGTGAGCCGCACAGGTGTTGGT 3971 0.16063792389945222 No Hit CTTCTGCAGGGACCCCTCCAGGGCCAAGGGCTGCAGGCTGCCT 3829 0.1548936314809878 No Hit GGTCTTGGGTGTGTAGAAGAAGCCTCGTTCCCCGCACACTAGG 3795 0.15351823752163718 No Hit CCCAAGACCCGCCGGGAGGCAGAGGACCTGCAGGTGGGGCAGG 3384 0.1368921517188986 No Hit GCCCTGGAGGGGTCCCTGCAGAAGCGTGGCATTGTGGAACAAT 3363 0.136042643685182 No Hit CATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATG 3320 0.1343031748542386 No Hit GTGTAGAAGAAGCCTCGTTCCCCGCACACTAGGTAGAGAGCTT 2951 0.11937610511893314 No Hit TCTCTACCTAGTGTGCGGGGAACGAGGCTTCTTCTACACACCC 2951 0.11937610511893314 No Hit CTGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCATCT 2904 0.11747482523394844 No Hit GCTTTATTCCATCTCTCTCGGTGCAGGAGGCGGCGGGTGGGGG 2838 0.11480494284226779 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2712 0.10970789463996838 No Hit ACCAACACCTGTGCGGCTCACACCTGGTGGAAGCTCTCTACCT 2685 0.10861567002518994 No Hit GGTGTGAGCCGCACAGGTGTTGGTTCACAAAGGCTGCGGCTGG 2616 0.10582442934297835 No Hit GTACAGCATTGTTCCACAATGCCACGCTTCTGCAGGGACCCCT 2602 0.10525809065383396 No Hit ATGCTGTACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTAC 2481 0.10036330626908613 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.0452763510312826E-5 2 4.0452763510312826E-5 0.0 0.0 0.0 4.0452763510312826E-5 3 4.0452763510312826E-5 0.0 0.0 0.0 4.0452763510312826E-5 4 4.0452763510312826E-5 0.0 0.0 0.0 4.0452763510312826E-5 5 1.2135829053093847E-4 4.0452763510312826E-5 0.0 0.0 4.0452763510312826E-5 6 1.2135829053093847E-4 4.0452763510312826E-5 0.0 0.0 4.0452763510312826E-5 7 1.2135829053093847E-4 4.0452763510312826E-5 0.0 0.0 4.0452763510312826E-5 8 1.2135829053093847E-4 4.0452763510312826E-5 0.0 0.0 4.0452763510312826E-5 9 1.2135829053093847E-4 4.0452763510312826E-5 0.0 0.0 4.0452763510312826E-5 10 1.2135829053093847E-4 4.0452763510312826E-5 0.0 0.0 8.090552702062565E-5 11 2.831693445721898E-4 4.0452763510312826E-5 0.0 0.0 8.090552702062565E-5 12 2.831693445721898E-4 4.0452763510312826E-5 0.0 4.0452763510312826E-5 8.090552702062565E-5 13 2.831693445721898E-4 4.0452763510312826E-5 0.0 4.0452763510312826E-5 8.090552702062565E-5 14 2.831693445721898E-4 4.0452763510312826E-5 0.0 1.618110540412513E-4 8.090552702062565E-5 15 2.831693445721898E-4 4.0452763510312826E-5 0.0 2.831693445721898E-4 8.090552702062565E-5 16 2.831693445721898E-4 4.0452763510312826E-5 0.0 6.067914526546923E-4 8.090552702062565E-5 17 3.236221080825026E-4 4.0452763510312826E-5 0.0 0.0012944884323300104 1.2135829053093847E-4 18 3.236221080825026E-4 4.0452763510312826E-5 0.0 0.001415846722860949 1.2135829053093847E-4 19 3.236221080825026E-4 8.090552702062565E-5 0.0 0.0016990160674331387 1.2135829053093847E-4 20 3.6407487159281543E-4 8.090552702062565E-5 0.0 0.00214399646604658 1.618110540412513E-4 21 3.6407487159281543E-4 8.090552702062565E-5 0.0 0.0024271658106187694 2.4271658106187694E-4 22 4.0452763510312825E-4 8.090552702062565E-5 0.0 0.0036002959524178415 2.4271658106187694E-4 23 4.0452763510312825E-4 8.090552702062565E-5 0.0 0.005137500965809729 2.4271658106187694E-4 24 4.0452763510312825E-4 8.090552702062565E-5 0.0 0.007362402958876934 2.4271658106187694E-4 25 4.0452763510312825E-4 8.090552702062565E-5 0.0 0.008616438627696631 2.4271658106187694E-4 26 4.0452763510312825E-4 8.090552702062565E-5 0.0 0.010841340620763838 2.831693445721898E-4 27 4.0452763510312825E-4 8.090552702062565E-5 0.0 0.018648723978254213 2.831693445721898E-4 28 4.0452763510312825E-4 1.618110540412513E-4 0.0 0.042556307212849094 2.831693445721898E-4 29 4.0452763510312825E-4 1.618110540412513E-4 0.0 0.07900424713564094 2.831693445721898E-4 30 4.4498039861344107E-4 1.618110540412513E-4 0.0 0.13005563468565573 2.831693445721898E-4 31 4.4498039861344107E-4 1.618110540412513E-4 0.0 0.2747551697620447 2.831693445721898E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACAGGC 2910 0.0 20.59794 7 TGCATCA 2830 0.0 20.591873 14 CAGGACA 3095 0.0 20.442648 4 CCAGGAC 3180 0.0 20.245285 3 CGTAATA 55 5.1453954E-4 20.181818 2 TCCAGGA 3305 0.0 19.647505 2 ACAGGCT 3120 0.0 19.567308 8 GCTGCAT 3060 0.0 19.285948 12 GGACAGG 3315 0.0 18.862745 6 GCATCAG 3100 0.0 18.858065 15 CCGTAAT 60 9.2409144E-4 18.5 1 CTGCATC 3270 0.0 18.0474 13 ATCAAGC 3240 0.0 17.98611 30 CTAGCGG 230 0.0 17.695652 29 AGGCCAT 3430 0.0 17.097668 25 CATCAAG 3420 0.0 17.039474 29 GGCCATC 3525 0.0 16.794327 26 CATCAGA 3550 0.0 16.780283 16 TCAAGCA 3405 0.0 16.62555 31 AGAGGCC 3515 0.0 16.578947 23 >>END_MODULE