##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630399.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1523429 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.835922776840928 33.0 31.0 34.0 30.0 34.0 2 32.05271135051256 33.0 31.0 34.0 30.0 34.0 3 32.1830259237549 34.0 31.0 34.0 30.0 34.0 4 35.817808378335975 37.0 35.0 37.0 35.0 37.0 5 35.75336034695414 37.0 35.0 37.0 35.0 37.0 6 35.814062880514946 37.0 35.0 37.0 35.0 37.0 7 35.793995650601374 37.0 35.0 37.0 35.0 37.0 8 35.79756129100864 37.0 35.0 37.0 35.0 37.0 9 37.53631117695672 39.0 37.0 39.0 35.0 39.0 10 37.42396462191543 39.0 37.0 39.0 34.0 39.0 11 37.509542617345474 39.0 37.0 39.0 35.0 39.0 12 37.43119961612914 39.0 37.0 39.0 34.0 39.0 13 37.44847249199011 39.0 37.0 39.0 34.0 39.0 14 38.65539188239163 40.0 38.0 41.0 34.0 41.0 15 38.66841382171404 40.0 38.0 41.0 34.0 41.0 16 38.62465726988261 40.0 38.0 41.0 34.0 41.0 17 38.608002079519295 40.0 38.0 41.0 34.0 41.0 18 38.58868775637066 40.0 38.0 41.0 34.0 41.0 19 38.629443840178965 40.0 38.0 41.0 34.0 41.0 20 38.62284688029439 40.0 38.0 41.0 34.0 41.0 21 38.56385889988966 40.0 38.0 41.0 34.0 41.0 22 38.52102592244207 40.0 38.0 41.0 34.0 41.0 23 38.45509570843144 40.0 38.0 41.0 34.0 41.0 24 38.433042826413306 40.0 38.0 41.0 34.0 41.0 25 38.413204028543504 40.0 38.0 41.0 34.0 41.0 26 38.267483420625446 40.0 38.0 41.0 34.0 41.0 27 38.14067147205416 40.0 38.0 41.0 33.0 41.0 28 38.08777173074689 40.0 38.0 41.0 33.0 41.0 29 38.02226556012784 40.0 38.0 41.0 33.0 41.0 30 37.957591065944 40.0 37.0 41.0 33.0 41.0 31 37.88270211476872 40.0 37.0 41.0 33.0 41.0 32 37.78205679424509 40.0 37.0 41.0 33.0 41.0 33 37.69219044668311 40.0 37.0 41.0 33.0 41.0 34 37.63872618940561 40.0 37.0 41.0 33.0 41.0 35 37.51815082947745 40.0 37.0 41.0 32.0 41.0 36 37.424924299064806 40.0 37.0 41.0 32.0 41.0 37 37.37450645878476 40.0 37.0 41.0 32.0 41.0 38 37.264809190319994 40.0 36.0 41.0 31.0 41.0 39 37.17793280815844 39.0 36.0 41.0 31.0 41.0 40 37.08108221649975 39.0 36.0 41.0 31.0 41.0 41 36.966744758042545 39.0 36.0 41.0 31.0 41.0 42 36.92117519096722 39.0 36.0 41.0 31.0 41.0 43 35.739632762668954 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 0.0 12 2.0 13 0.0 14 3.0 15 1.0 16 3.0 17 18.0 18 31.0 19 85.0 20 183.0 21 368.0 22 754.0 23 1282.0 24 2195.0 25 3570.0 26 5557.0 27 8188.0 28 12018.0 29 16722.0 30 22549.0 31 29685.0 32 38454.0 33 50702.0 34 68116.0 35 90551.0 36 127201.0 37 195762.0 38 358922.0 39 490501.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.21063141111269 20.47020241836016 12.420598531339499 24.89856763918765 2 18.760703649464464 22.078876009318453 34.564984649760504 24.595435691456576 3 19.64226754249788 23.821458039724856 30.829595603077003 25.706678814700258 4 14.11782235995245 15.935498142676815 36.80158379550343 33.1450957018673 5 13.82965664957146 37.53657046045467 34.71018340861307 13.923589481360798 6 32.57631304117225 37.01196445649912 16.10321189894639 14.308510603382238 7 27.866214966368634 31.99322055704598 21.655817238611057 18.484747237974332 8 27.332813015900314 32.87202751162017 20.735524924364707 19.05963454811481 9 26.87837765987125 13.686689698043034 20.966254416845157 38.46867822524056 10 16.680462299194776 27.033028779155444 34.149934128863244 22.136574792786536 11 34.357426568615935 22.365138119334738 21.818345324921605 21.459089987127722 12 20.898315576242805 27.244065854069998 29.727279709129867 22.130338860557337 13 30.32120302291738 20.424319085431616 24.913993366280938 24.34048452537007 14 22.381614108698205 22.0671262001708 26.288786677948234 29.26247301318276 15 25.27364255242614 28.357672067421586 23.296392546026105 23.07229283412617 16 23.866159827599446 27.297169740106035 24.704597326163544 24.13207310613097 17 21.806201667422638 26.760879568394717 26.951830377392056 24.48108838679059 18 22.104279227978463 25.708122925321756 28.227242621743446 23.96035522495633 19 22.457626840502577 26.05864795799476 28.444975118630406 23.03875008287226 20 24.267950787335675 25.599748987317426 27.676051854073936 22.456248371272963 21 24.498811562599897 26.085035797533063 26.546297858318308 22.869854781548728 22 24.059736292272234 25.97226388627235 27.412239100082775 22.55576072137264 23 23.777609589944788 25.94535091559895 26.98320696271372 23.293832531742538 24 23.334530194712062 26.181594284997857 27.288308152201385 23.1955673680887 25 23.612193282391235 26.10485949788274 27.086854720502235 23.19609249922379 26 22.96352504777052 26.3048031775685 26.982025417659766 23.74964635700121 27 23.068616916180538 26.149233078797895 27.542996752720345 23.23915325230122 28 23.04262292499355 26.237783316452557 27.52317305237067 23.196420706183222 29 22.370651996253187 26.509341754686304 28.1444031851829 22.97560306387761 30 23.027394122075922 27.23796120462457 27.195097375722792 22.539547297576718 31 23.48274845759139 27.387886143692945 26.77466426069085 22.35470113802481 32 22.546242719549124 26.87181352068262 27.226211395476913 23.355732364291345 33 22.305929583853267 26.60504690405657 27.891815109204305 23.197208402885856 34 22.90241291192435 25.50942643208184 28.265445911821292 23.322714744172522 35 22.590944507423714 26.163477260837233 28.294918896778253 22.9506593349608 36 22.639519137419597 27.238420694367772 27.217874938707347 22.90418522950528 37 23.405488539341185 26.173586035187725 27.536563896315485 22.88436152915561 38 22.672996247281628 26.893475180005105 27.535776199612847 22.89775237310042 39 22.4479119145034 26.474683099770317 28.220022068635952 22.857382917090327 40 21.89560524317182 25.765624784614182 29.091542828710757 23.247227143503242 41 22.066075937900617 25.768906854208502 28.802917628586567 23.362099579304317 42 21.724149927564724 25.792865962247006 29.19545315206682 23.28753095812145 43 21.554926419281763 24.989546608342103 29.220528163767394 24.234998808608736 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 223.0 1 216.0 2 209.0 3 455.5 4 702.0 5 702.0 6 1008.0 7 1314.0 8 1241.5 9 1169.0 10 1636.5 11 2104.0 12 2104.0 13 3986.5 14 5869.0 15 9427.5 16 12986.0 17 12583.0 18 12180.0 19 12180.0 20 15152.5 21 18125.0 22 18320.0 23 18515.0 24 22727.0 25 26939.0 26 26939.0 27 30485.0 28 34031.0 29 39909.0 30 45787.0 31 51008.0 32 56229.0 33 56229.0 34 62045.5 35 67862.0 36 74590.0 37 81318.0 38 83490.5 39 85663.0 40 85663.0 41 90747.0 42 95831.0 43 97222.0 44 98613.0 45 97695.5 46 96778.0 47 96778.0 48 97910.5 49 99043.0 50 97902.0 51 96761.0 52 99785.5 53 102810.0 54 102810.0 55 102723.0 56 102636.0 57 99727.0 58 96818.0 59 89177.0 60 81536.0 61 81536.0 62 72363.5 63 63191.0 64 54728.5 65 46266.0 66 37980.0 67 29694.0 68 29694.0 69 23922.0 70 18150.0 71 14723.0 72 11296.0 73 8656.0 74 6016.0 75 6016.0 76 4441.0 77 2866.0 78 2262.5 79 1659.0 80 1326.5 81 994.0 82 994.0 83 740.5 84 487.0 85 399.5 86 312.0 87 283.0 88 254.0 89 254.0 90 198.0 91 142.0 92 89.0 93 36.0 94 24.5 95 13.0 96 13.0 97 7.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1523429.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.417328649520876 #Duplication Level Percentage of deduplicated Percentage of total 1 79.08712054886573 46.99145433596231 2 13.210193294460886 15.698287930013588 3 3.7490175720604952 6.682698275758418 4 1.4365447533967945 3.4142260692928903 5 0.6549230526850328 1.9456889130767034 6 0.35296950939198585 1.258350320568226 7 0.2292007528345315 0.9532947520520872 8 0.15035058241493016 0.7146743974395823 9 0.12074786708554994 0.6457064132115706 >10 0.8564751458863972 10.136387641612236 >50 0.0968588321758326 4.009267993581389 >100 0.052392731272784245 5.308387661980953 >500 0.002763239197475021 0.9729561116281825 >1k 2.210591357980017E-4 0.45367403436567566 >5k 2.210591357980017E-4 0.8149451494562348 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6472 0.42483108828832844 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5937 0.3897129436291419 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4718 0.30969608691970546 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2190 0.14375464823106293 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.564139188633011E-5 0.0 8 0.0 0.0 0.0 6.564139188633011E-5 0.0 9 0.0 0.0 0.0 6.564139188633011E-5 0.0 10 0.0 0.0 0.0 6.564139188633011E-5 0.0 11 0.0 0.0 0.0 6.564139188633011E-5 0.0 12 0.0 0.0 0.0 6.564139188633011E-5 0.0 13 0.0 0.0 0.0 6.564139188633011E-5 0.0 14 0.0 0.0 0.0 6.564139188633011E-5 0.0 15 0.0 0.0 0.0 6.564139188633011E-5 0.0 16 0.0 0.0 0.0 1.9692417565899035E-4 0.0 17 0.0 0.0 0.0 5.251311350906409E-4 0.0 18 0.0 0.0 0.0 7.220553107496313E-4 0.0 19 0.0 0.0 0.0 7.876967026359614E-4 0.0 20 0.0 0.0 0.0 0.0010502622701812818 0.0 21 0.0 0.0 0.0 0.0013784692296129324 0.0 22 0.0 0.0 0.0 0.002231807324135224 0.0 23 0.0 0.0 0.0 0.003807200729407147 0.0 24 0.0 0.0 0.0 0.00590772526976971 0.0 25 0.0 0.0 0.0 0.006498497796746681 0.0 26 0.0 0.0 0.0 0.007680042850700623 0.0 27 0.0 0.0 0.0 0.012931354201607032 0.0 28 0.0 0.0 0.0 0.02737246041659966 0.0 29 0.0 0.0 0.0 0.05185669959020079 0.0 30 0.0 0.0 0.0 0.088484596262773 0.0 31 0.0 0.0 0.0 0.2053262738204406 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTACT 40 0.0019314738 23.125002 13 TTCGGCG 45 0.0038263712 20.555555 13 GGTATCA 2315 0.0 20.537796 1 CGGTTAT 55 5.1441515E-4 20.181818 24 CCGAATT 120 2.382876E-10 20.041668 14 CGAATTA 125 4.129106E-10 19.24 15 GGTCCGC 50 0.0070359088 18.499998 27 AGACGTA 50 0.0070359088 18.499998 5 CGACCAT 155 2.1827873E-11 17.903225 10 TCGTTAC 75 2.0678232E-4 17.266666 1 TCTATAC 140 1.869921E-9 17.178572 3 TTCGTTC 80 3.3834687E-4 16.1875 29 TATACGA 80 3.3834687E-4 16.1875 36 CCGACCA 195 1.8189894E-12 16.128206 9 CTCGGCG 85 5.3655735E-4 15.235294 17 TACACGG 85 5.3655735E-4 15.235294 5 AGTTCCG 210 9.094947E-12 14.97619 5 ATGCGTT 175 2.239176E-9 14.8 36 TCTGTCG 250 0.0 14.799999 8 GTTCCGA 215 1.2732926E-11 14.627907 6 >>END_MODULE