##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630379.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1748986 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.896721300227675 33.0 31.0 34.0 30.0 34.0 2 32.113376550755696 33.0 31.0 34.0 30.0 34.0 3 32.23566054845493 34.0 31.0 34.0 30.0 34.0 4 35.86433281913063 37.0 35.0 37.0 35.0 37.0 5 35.790132110834506 37.0 35.0 37.0 35.0 37.0 6 35.8430387664624 37.0 35.0 37.0 35.0 37.0 7 35.825116953480475 37.0 35.0 37.0 35.0 37.0 8 35.82179903098138 37.0 35.0 37.0 35.0 37.0 9 37.57892573182404 39.0 37.0 39.0 35.0 39.0 10 37.46984252589786 39.0 37.0 39.0 35.0 39.0 11 37.53908264560151 39.0 37.0 39.0 35.0 39.0 12 37.46360176696669 39.0 37.0 39.0 35.0 39.0 13 37.46943886343287 39.0 37.0 39.0 35.0 39.0 14 38.73078629560214 40.0 38.0 41.0 35.0 41.0 15 38.74617406886047 40.0 38.0 41.0 35.0 41.0 16 38.704309811513646 40.0 38.0 41.0 35.0 41.0 17 38.67988480182231 40.0 38.0 41.0 34.0 41.0 18 38.62432346513923 40.0 38.0 41.0 34.0 41.0 19 38.66235693138767 40.0 38.0 41.0 34.0 41.0 20 38.6389548000956 40.0 38.0 41.0 34.0 41.0 21 38.585147622679656 40.0 38.0 41.0 34.0 41.0 22 38.55728805147668 40.0 38.0 41.0 34.0 41.0 23 38.50239109975723 40.0 38.0 41.0 34.0 41.0 24 38.467446852061705 40.0 38.0 41.0 34.0 41.0 25 38.44366278517953 40.0 38.0 41.0 34.0 41.0 26 38.30166107676105 40.0 38.0 41.0 34.0 41.0 27 38.184473174742394 40.0 38.0 41.0 33.0 41.0 28 38.1266974121005 40.0 38.0 41.0 33.0 41.0 29 38.080503217292765 40.0 38.0 41.0 33.0 41.0 30 38.02507910297738 40.0 38.0 41.0 33.0 41.0 31 37.97800382621702 40.0 37.0 41.0 33.0 41.0 32 37.89650345971894 40.0 37.0 41.0 33.0 41.0 33 37.815563417888995 40.0 37.0 41.0 33.0 41.0 34 37.763597307239735 40.0 37.0 41.0 33.0 41.0 35 37.64385020806341 40.0 37.0 41.0 32.0 41.0 36 37.568726107584624 40.0 37.0 41.0 32.0 41.0 37 37.52651650727908 40.0 37.0 41.0 32.0 41.0 38 37.4174647481455 40.0 37.0 41.0 31.0 41.0 39 37.34633095976754 40.0 37.0 41.0 31.0 41.0 40 37.257962042006056 40.0 36.0 41.0 31.0 41.0 41 37.14958381599395 40.0 36.0 41.0 31.0 41.0 42 37.1143308179711 39.0 36.0 41.0 31.0 41.0 43 35.90911934114967 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 0.0 12 1.0 13 1.0 14 1.0 15 5.0 16 12.0 17 29.0 18 74.0 19 141.0 20 247.0 21 549.0 22 895.0 23 1546.0 24 2487.0 25 4142.0 26 6192.0 27 9257.0 28 13093.0 29 18559.0 30 24915.0 31 33305.0 32 43351.0 33 56295.0 34 74761.0 35 99321.0 36 139425.0 37 211792.0 38 404169.0 39 604416.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.40954473048955 19.20621434362539 12.234460424497394 26.14978050138766 2 18.294085830303956 21.225212780433917 34.92515091601648 25.555550473245642 3 19.430115506928015 23.32420042241619 30.173311850409323 27.07237222024648 4 14.514295711915363 15.654556411543602 35.11040111241599 34.720746764125046 5 14.311320959687498 36.83116960341592 34.61542859691272 14.242080839983853 6 34.203589965843065 35.575870818863045 15.986234309479894 14.234304905813996 7 28.99897426280142 30.825518328906004 21.61223703334389 18.563270374948683 8 26.722340830629864 34.09289725589571 20.367801686234195 18.81696022724024 9 26.616851135457914 14.486736886401609 19.620511542116404 39.275900436024074 10 16.514940657043567 26.83126108499439 33.581000648375685 23.072797609586353 11 35.395137525400436 21.98702562513365 21.816755537208415 20.8010813122575 12 21.135846713467117 25.644058900414297 29.691832867730216 23.52826151838837 13 29.70824237586808 19.85481873496986 25.47241658881203 24.96452230035003 14 22.731171089991573 20.994450498746133 25.021240879000743 31.253137532261547 15 25.057661982428677 27.958771539623527 22.359698705421312 24.62386777252648 16 25.003459147185854 26.769682547487516 23.766971262205644 24.459887043120982 17 23.612824802485555 26.751672111726453 25.29076847956473 24.344734606223266 18 23.38629354380195 25.51284001129798 26.70753225011521 24.393334194784863 19 24.314088277436184 25.694602472518362 26.481744279256663 23.509564970788787 20 24.715120647049204 25.057490454469043 26.317477669918453 23.909911228563292 21 24.5973381147705 25.793116697332053 25.326160415234884 24.28338477266256 22 24.53581675325017 25.362524342676267 25.78362548356591 24.318033420507653 23 23.853078297939494 25.696317752114656 25.8866566113165 24.563947338629355 24 24.469263904914047 25.91158534144927 25.82187621856321 23.797274535073466 25 24.62666939586709 25.296543254205577 25.79471762495526 24.282069724972068 26 24.28904519533032 25.97545091841787 25.709982812898446 24.02552107335336 27 24.759203332673906 25.250059177146074 25.520101361588942 24.47063612859108 28 23.968287910823758 25.48528118578422 26.2442352311568 24.30219567223523 29 23.681092930417968 25.93045341700848 26.164932137821573 24.223521514751976 30 23.547301121907207 26.680545184466887 25.98728634763229 23.78486734599362 31 24.406255967743597 26.016617628728877 25.60415006180724 23.97297634172029 32 23.626661391228975 25.806381526210043 25.872305438694195 24.694651643866788 33 23.64335677929955 25.608952844676857 26.245092870954938 24.502597505068653 34 24.361773050213095 25.27384438754798 26.162759450332935 24.201623111905985 35 24.476353727245385 25.439997804442115 26.365333970654998 23.7183144976575 36 23.797903470925437 26.129254322218703 25.978938653597 24.093903553258862 37 24.83256012340865 25.02798764541283 25.949893252433125 24.1895589787454 38 24.090987577945164 25.492771240021362 26.455386149460313 23.960855032573157 39 24.1895589787454 25.28853861608955 26.35229784572318 24.169604559441872 40 23.755821944829748 25.004602666916714 27.06288100648033 24.17669438177321 41 23.223627862086946 25.48568141769002 27.31245418774078 23.97823653248225 42 24.0651440320277 24.943367185329098 26.990095975611013 24.00139280703219 43 23.47748924233813 24.63804741718916 27.173859596360405 24.7106037441123 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 106.0 1 112.5 2 119.0 3 292.5 4 466.0 5 466.0 6 643.5 7 821.0 8 756.5 9 692.0 10 1006.5 11 1321.0 12 1321.0 13 2362.5 14 3404.0 15 5203.5 16 7003.0 17 7609.5 18 8216.0 19 8216.0 20 10232.5 21 12249.0 22 14268.5 23 16288.0 24 19598.5 25 22909.0 26 22909.0 27 26966.0 28 31023.0 29 38833.0 30 46643.0 31 51248.0 32 55853.0 33 55853.0 34 61711.5 35 67570.0 36 73784.5 37 79999.0 38 88525.5 39 97052.0 40 97052.0 41 103748.0 42 110444.0 43 107374.5 44 104305.0 45 110357.0 46 116409.0 47 116409.0 48 120271.0 49 124133.0 50 126633.0 51 129133.0 52 134602.0 53 140071.0 54 140071.0 55 130040.0 56 120009.0 57 113699.5 58 107390.0 59 98530.5 60 89671.0 61 89671.0 62 82791.5 63 75912.0 64 66806.5 65 57701.0 66 49864.0 67 42027.0 68 42027.0 69 35511.0 70 28995.0 71 25263.0 72 21531.0 73 17167.0 74 12803.0 75 12803.0 76 9832.0 77 6861.0 78 5651.5 79 4442.0 80 3360.0 81 2278.0 82 2278.0 83 1701.0 84 1124.0 85 977.0 86 830.0 87 749.5 88 669.0 89 669.0 90 543.0 91 417.0 92 243.0 93 69.0 94 46.0 95 23.0 96 23.0 97 13.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1748986.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.49474677100071 #Duplication Level Percentage of deduplicated Percentage of total 1 85.39503527785388 49.09765928800881 2 9.044539301613993 10.400269936133203 3 2.254881130453478 3.889314587823916 4 0.9489053338025091 2.182282875065087 5 0.493790590599055 1.4195182482197777 6 0.32602253462083797 1.1246749841798935 7 0.2251737553712426 0.9062415631181397 8 0.16247001303236802 0.7472937805741748 9 0.1274791925298144 0.6596445503765993 >10 0.8024803577076384 8.904726413873437 >50 0.1050900539928548 4.247769528637179 >100 0.10456360130778118 12.076754957860388 >500 0.008073723190373253 3.121120871542504 >1k 0.0014951339241431952 1.2227284145868837 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2504 0.14316867030382177 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2227 0.12733092203139418 No Hit GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 2114 0.12087003555202842 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1860 0.10634733497009125 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 1.1435197308611962E-4 0.0 0.0 0.0 0.0 12 1.715279596291794E-4 0.0 0.0 5.717598654305981E-5 0.0 13 1.715279596291794E-4 0.0 0.0 5.717598654305981E-5 0.0 14 1.715279596291794E-4 0.0 0.0 5.717598654305981E-5 0.0 15 1.715279596291794E-4 0.0 0.0 1.715279596291794E-4 0.0 16 1.715279596291794E-4 0.0 0.0 5.145838788875383E-4 0.0 17 1.715279596291794E-4 0.0 0.0 6.861118385167176E-4 0.0 18 1.715279596291794E-4 0.0 0.0 6.861118385167176E-4 0.0 19 2.2870394617223924E-4 0.0 0.0 8.576397981458971E-4 0.0 20 2.2870394617223924E-4 0.0 0.0 9.719917712320167E-4 0.0 21 2.8587993271529904E-4 0.0 0.0 0.0010863437443181362 0.0 22 2.8587993271529904E-4 0.0 0.0 0.0016009276232056746 0.0 23 3.430559192583588E-4 0.0 0.0 0.0019439835424640334 0.0 24 3.430559192583588E-4 0.0 0.0 0.003259031232954409 0.0 25 3.430559192583588E-4 0.0 0.0 0.0038879670849280667 0.0 26 3.430559192583588E-4 0.0 0.0 0.004859958856160084 0.0 27 3.430559192583588E-4 0.0 0.0 0.00903380587380345 0.0 28 3.430559192583588E-4 0.0 0.0 0.02052617916895847 0.0 29 4.0023190580141865E-4 5.717598654305981E-5 0.0 0.03796485506459171 0.0 30 4.0023190580141865E-4 5.717598654305981E-5 0.0 0.06266488125119354 0.0 31 4.0023190580141865E-4 5.717598654305981E-5 0.0 0.14860038902541245 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAA 40 0.0019315876 23.125002 33 GGTATCA 1100 0.0 21.863638 1 TCGAGTA 45 0.003826594 20.555557 2 TCTAGCG 200 0.0 19.425 28 CTAGCGG 215 0.0 18.069767 29 TACGCAT 105 4.800804E-7 17.61905 28 AAGACGG 255 0.0 17.411764 5 CGCAATA 225 0.0 17.266666 36 TTCCTCG 385 0.0 16.818182 19 CGGCCTT 375 0.0 16.28 24 TATACTG 285 0.0 16.22807 5 TAAACCG 70 0.002593218 15.857143 5 GTATACG 70 0.002593218 15.857143 1 CCCGATT 70 0.002593218 15.857143 14 GACGGAC 270 0.0 15.074073 7 ATCTCGC 395 0.0 14.987343 11 GTATCAA 1595 0.0 14.8463955 2 ATCCGTC 75 0.0041055446 14.8 30 CTAGACT 140 5.9995E-7 14.535715 4 TAGACTA 90 8.277056E-4 14.388889 5 >>END_MODULE