##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630355.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2272380 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.807015551976342 33.0 31.0 34.0 30.0 34.0 2 32.02363777185154 33.0 31.0 34.0 30.0 34.0 3 32.15100731391757 34.0 31.0 34.0 30.0 34.0 4 35.80070630792385 37.0 35.0 37.0 35.0 37.0 5 35.72899911106417 37.0 35.0 37.0 35.0 37.0 6 35.78982124468619 37.0 35.0 37.0 35.0 37.0 7 35.77424286430966 37.0 35.0 37.0 33.0 37.0 8 35.77496369445251 37.0 35.0 37.0 35.0 37.0 9 37.51865489046726 39.0 37.0 39.0 35.0 39.0 10 37.41561534602487 39.0 37.0 39.0 34.0 39.0 11 37.47484531636434 39.0 37.0 39.0 35.0 39.0 12 37.40981613990618 39.0 37.0 39.0 34.0 39.0 13 37.41722467192987 39.0 37.0 39.0 34.0 39.0 14 38.63792983567889 40.0 38.0 41.0 34.0 41.0 15 38.65353814062789 40.0 38.0 41.0 34.0 41.0 16 38.6153719888399 40.0 38.0 41.0 34.0 41.0 17 38.607211821966395 40.0 38.0 41.0 34.0 41.0 18 38.57193383148945 40.0 38.0 41.0 34.0 41.0 19 38.62637278976228 40.0 38.0 41.0 34.0 41.0 20 38.60822837729605 40.0 38.0 41.0 34.0 41.0 21 38.55548763851117 40.0 38.0 41.0 34.0 41.0 22 38.52645816280728 40.0 38.0 41.0 34.0 41.0 23 38.47389301085206 40.0 38.0 41.0 34.0 41.0 24 38.4435802990697 40.0 38.0 41.0 34.0 41.0 25 38.42464772617256 40.0 38.0 41.0 34.0 41.0 26 38.27490780591275 40.0 38.0 41.0 34.0 41.0 27 38.15881894753518 40.0 38.0 41.0 33.0 41.0 28 38.10520687561059 40.0 38.0 41.0 33.0 41.0 29 38.05275834147458 40.0 38.0 41.0 33.0 41.0 30 37.983383500998954 40.0 37.0 41.0 33.0 41.0 31 37.91868261470353 40.0 37.0 41.0 33.0 41.0 32 37.82627905543967 40.0 37.0 41.0 33.0 41.0 33 37.74262315281775 40.0 37.0 41.0 33.0 41.0 34 37.67963368802753 40.0 37.0 41.0 33.0 41.0 35 37.56732764766456 40.0 37.0 41.0 32.0 41.0 36 37.48068016792966 40.0 37.0 41.0 32.0 41.0 37 37.42326063422491 40.0 37.0 41.0 32.0 41.0 38 37.322611535042554 40.0 36.0 41.0 31.0 41.0 39 37.23980716253443 40.0 36.0 41.0 31.0 41.0 40 37.1470779535113 40.0 36.0 41.0 31.0 41.0 41 37.031255775882556 39.0 36.0 41.0 31.0 41.0 42 36.98979704098786 39.0 36.0 41.0 31.0 41.0 43 35.8355512722344 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 11.0 11 8.0 12 10.0 13 2.0 14 5.0 15 7.0 16 17.0 17 22.0 18 83.0 19 145.0 20 275.0 21 561.0 22 1070.0 23 1866.0 24 3308.0 25 5299.0 26 8116.0 27 12363.0 28 17935.0 29 24981.0 30 34213.0 31 45059.0 32 58366.0 33 75604.0 34 99384.0 35 134135.0 36 186457.0 37 286690.0 38 524536.0 39 751844.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41010746442056 20.27121344141385 13.491141446413014 24.827537647752575 2 16.539443226925073 22.170411638898425 37.401138894023006 23.889006240153495 3 18.702637763050195 24.467650657020393 31.663102122004243 25.16660945792517 4 13.913121925030145 16.349246164813984 36.293005571251285 33.444626338904584 5 13.217067567924378 38.177109462325845 35.03965005852894 13.566172911220834 6 32.141279187459844 37.03623513672889 16.817125656800357 14.005360019010904 7 27.150432586099154 32.35880442531619 22.51225587269735 17.978507115887307 8 25.681004057419976 36.15724482700956 20.8347195451465 17.327031570423962 9 25.969248101109848 15.461850570767213 20.79762187662275 37.77127945150019 10 16.00273721824695 28.429884086288386 33.96095723426539 21.60642146119927 11 33.48418838398508 23.39564685483942 22.912276995924977 20.20788776525053 12 20.117629973860005 27.231272938505 30.92968605602936 21.721411031605626 13 28.730538026210407 20.935142889833568 26.72501958299228 23.609299500963747 14 21.641318793511648 21.90258671525009 26.928682702716976 29.527411788521285 15 23.695156619931527 28.984060764484816 24.25289784279038 23.06788477279328 16 23.167031922477754 28.35353241975374 25.203047025585512 23.276388632183 17 21.948485728619332 28.262922574569394 26.94461313688732 22.843978559923954 18 21.380975012981985 26.966220438483003 28.762662934896454 22.890141613638566 19 22.716711113458135 27.12970541898802 28.886497856872527 21.267085610681313 20 23.245715945396455 26.4608032107306 28.6071431714766 21.68633767239634 21 22.969881797938722 27.265950237196247 27.26964680203135 22.49452116283368 22 22.851459703042625 26.915524692172966 27.66817169663525 22.564843908149165 23 22.23408936885556 27.247995493711443 27.840546035434215 22.677369101998785 24 23.156118254869344 27.165966959751447 27.72608454571859 21.95183023966062 25 22.90585201418777 26.579929413214337 27.933268203381477 22.580950369216417 26 22.68441017787518 26.997817266478318 27.788706114294264 22.52906644135224 27 22.66808368318679 26.78328448586944 27.67574085320237 22.8728909777414 28 22.056170182803932 27.31211329091085 28.169232258689124 22.46248426759609 29 22.29596282311937 27.590719861994913 28.04874184775434 22.064575467131377 30 21.891937087987046 28.203557503586545 27.77748439961626 22.127021008810146 31 22.559123033999594 27.395462026597666 27.974722537603746 22.070692401798993 32 21.660153671481 27.478062647972614 28.05780723294519 22.803976447601194 33 21.99258046629525 27.077337417157345 28.354280534065605 22.5758015824818 34 22.147132081782097 26.855895580844752 28.300416303611193 22.696556033761958 35 22.385692533819167 26.956142898634912 28.138427551729905 22.519737015816016 36 22.026465643950395 27.106601888768605 28.210378545841802 22.656553921439198 37 22.65734604247529 25.959566621779807 28.151541555549684 23.231545780195216 38 22.015860023411577 26.470924757302917 28.93882185197898 22.574393367306524 39 21.90971580457494 26.030989535200977 29.33787482727361 22.721419832950474 40 21.681936999973598 25.680475976729245 29.854469762979786 22.783117260317375 41 21.044895660056856 26.326978762354887 29.99595138137107 22.632174196217182 42 21.467052165570898 25.664281502213537 29.754222445189626 23.11444388702594 43 20.765761008282066 25.679947896038513 29.870576224047035 23.683714871632386 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 747.0 1 644.0 2 541.0 3 1307.0 4 2073.0 5 2073.0 6 2744.0 7 3415.0 8 3288.5 9 3162.0 10 4559.0 11 5956.0 12 5956.0 13 9578.5 14 13201.0 15 20928.0 16 28655.0 17 27156.0 18 25657.0 19 25657.0 20 28186.5 21 30716.0 22 32690.5 23 34665.0 24 39417.5 25 44170.0 26 44170.0 27 49268.0 28 54366.0 29 67446.0 30 80526.0 31 84897.5 32 89269.0 33 89269.0 34 96295.5 35 103322.0 36 109323.0 37 115324.0 38 126201.0 39 137078.0 40 137078.0 41 145932.0 42 154786.0 43 146955.0 44 139124.0 45 145656.0 46 152188.0 47 152188.0 48 153496.0 49 154804.0 50 157740.5 51 160677.0 52 164535.5 53 168394.0 54 168394.0 55 149990.5 56 131587.0 57 122508.5 58 113430.0 59 101399.5 60 89369.0 61 89369.0 62 81368.0 63 73367.0 64 64055.5 65 54744.0 66 46533.5 67 38323.0 68 38323.0 69 32064.0 70 25805.0 71 22105.0 72 18405.0 73 14685.5 74 10966.0 75 10966.0 76 8378.5 77 5791.0 78 4745.0 79 3699.0 80 2801.5 81 1904.0 82 1904.0 83 1378.5 84 853.0 85 708.0 86 563.0 87 483.0 88 403.0 89 403.0 90 336.5 91 270.0 92 166.5 93 63.0 94 38.0 95 13.0 96 13.0 97 9.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2272380.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.42256304599885 #Duplication Level Percentage of deduplicated Percentage of total 1 81.17172921786667 44.17573550912096 2 11.683743647831069 12.7171855057475 3 3.2618166699227262 5.325492700900788 4 1.310084766149307 2.8519268312545325 5 0.656307866093791 1.7858978110037154 6 0.38244885723975025 1.2488308227000313 7 0.24350717786592044 0.9276599317692917 8 0.17050793419324067 0.7423583038779732 9 0.13013014154001312 0.6373814248931506 >10 0.8045735766406175 8.311467724906816 >50 0.08479787312519194 3.23690957908575 >100 0.08683020816139307 10.032283356289728 >500 0.009635482281780131 3.589499508490472 >1k 0.0036436697704210373 3.2192553935545174 >5k 1.6194087868537943E-4 0.7017099840799689 >10k+ 8.097043934268972E-5 0.49640561232484615 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11265 0.4957357484223589 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8069 0.35509025779139053 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7855 0.34567281880671363 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4217 0.18557635606720707 No Hit GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 2843 0.12511111697867433 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 2599 0.11437347626717363 No Hit CTTCTGGGAAATCTCGCCTTCCTCGGCCTTTCACCAGCCAAGC 2550 0.11221714678002798 No Hit TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA 2501 0.11006081729288235 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 2484 0.10931270298101549 No Hit GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC 2317 0.10196358003502935 No Hit CTTTATAAACTGGTTGATTCAGACCAAAATCACTGACAGGAAA 2280 0.10033533123861325 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.4006724227461956E-5 0.0 3 0.0 0.0 0.0 4.4006724227461956E-5 0.0 4 0.0 0.0 0.0 4.4006724227461956E-5 0.0 5 0.0 0.0 0.0 4.4006724227461956E-5 0.0 6 0.0 0.0 0.0 4.4006724227461956E-5 0.0 7 0.0 0.0 0.0 4.4006724227461956E-5 0.0 8 0.0 0.0 0.0 8.801344845492391E-5 0.0 9 0.0 0.0 0.0 1.3202017268238586E-4 0.0 10 0.0 0.0 0.0 3.960605180471576E-4 0.0 11 0.0 0.0 0.0 4.840739665020815E-4 0.0 12 0.0 0.0 0.0 5.720874149570055E-4 0.0 13 0.0 0.0 0.0 6.160941391844674E-4 0.0 14 0.0 0.0 0.0 8.361277603217772E-4 0.0 15 0.0 0.0 0.0 9.68147933004163E-4 0.0 16 0.0 0.0 0.0 0.0014082151752787826 0.0 17 0.0 0.0 0.0 0.0018042756933259402 0.0 18 0.0 0.0 0.0 0.00202430931446325 0.0 19 0.0 0.0 0.0 0.0024643765567378697 0.0 20 0.0 0.0 0.0 0.002816430350557565 0.0 21 0.0 0.0 0.0 0.0035645446624244185 0.0 22 0.0 0.0 0.0 0.005060773286158125 0.0 23 0.0 4.4006724227461956E-5 0.0 0.006997069152166451 0.0 24 0.0 4.4006724227461956E-5 0.0 0.010297573469226098 0.0 25 0.0 4.4006724227461956E-5 0.0 0.011881815541414728 0.0 26 0.0 4.4006724227461956E-5 0.0 0.014786259340427217 0.0 27 0.0 4.4006724227461956E-5 0.0 0.030320632992721287 0.0 28 0.0 4.4006724227461956E-5 0.0 0.08264462809917356 0.0 29 0.0 4.4006724227461956E-5 0.0 0.15719201894049412 0.0 30 0.0 4.4006724227461956E-5 0.0 0.2690571119267024 0.0 31 0.0 4.4006724227461956E-5 0.0 0.6109893591740818 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGCG 30 3.600576E-4 30.833334 9 TACGACG 160 1.8189894E-12 18.5 5 CGAATTA 140 9.458745E-11 18.5 15 CTTATAC 1580 0.0 17.446201 37 CGGCCTT 735 0.0 17.367346 24 CTAGTAC 135 2.2224413E-8 16.444445 3 ATCTCGC 800 0.0 16.41875 11 GACGGTA 175 1.3278623E-10 15.857142 8 TCTCGCC 830 0.0 15.825301 12 TTCCTCG 800 0.0 15.725 19 CGACGGT 180 2.0190782E-10 15.416666 7 ACCGTCG 170 1.4879333E-9 15.235293 8 GGTATCA 3990 0.0 15.068922 1 TTGGCCG 645 0.0 14.627907 31 CCGAATT 190 4.5656634E-10 14.605264 14 CTCGCCT 910 0.0 14.0274725 13 TCTTATA 2675 0.0 13.831776 37 TATACAG 310 0.0 13.725807 5 GGCCGCA 705 0.0 13.6453905 33 ACGGTAT 205 1.4260877E-9 13.536586 9 >>END_MODULE