##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630349.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 517072 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.676130210106137 31.0 30.0 33.0 27.0 34.0 2 30.942143453909708 31.0 31.0 34.0 27.0 34.0 3 31.022112974595416 31.0 31.0 34.0 27.0 34.0 4 34.900663737351856 35.0 35.0 37.0 32.0 37.0 5 34.36695276479871 35.0 35.0 37.0 30.0 37.0 6 34.481252127363305 35.0 35.0 37.0 30.0 37.0 7 34.5060301079927 35.0 35.0 37.0 30.0 37.0 8 34.47675952285175 35.0 35.0 37.0 30.0 37.0 9 36.114127239533374 37.0 35.0 39.0 32.0 39.0 10 35.775946096481725 37.0 35.0 39.0 30.0 39.0 11 35.95219621251972 37.0 35.0 39.0 31.0 39.0 12 35.79946699879321 37.0 35.0 39.0 30.0 39.0 13 35.853295092366245 37.0 35.0 39.0 30.0 39.0 14 36.77943884023888 38.0 36.0 40.0 31.0 41.0 15 36.73729770708915 38.0 36.0 40.0 31.0 41.0 16 36.644175279264786 38.0 36.0 40.0 31.0 41.0 17 36.58541170281895 38.0 36.0 40.0 31.0 41.0 18 36.47037549896339 38.0 35.0 40.0 31.0 41.0 19 36.52707553300121 38.0 35.0 40.0 30.0 41.0 20 36.48126566512981 38.0 35.0 40.0 30.0 41.0 21 36.382488318841474 38.0 35.0 40.0 30.0 41.0 22 36.33173523223071 38.0 35.0 40.0 30.0 41.0 23 36.25463185010985 38.0 35.0 40.0 30.0 41.0 24 36.18477890893338 38.0 35.0 40.0 30.0 41.0 25 36.13713950861776 38.0 34.0 40.0 30.0 41.0 26 35.880902466194264 38.0 34.0 40.0 29.0 41.0 27 35.749162592443604 38.0 34.0 40.0 29.0 41.0 28 35.630575625831604 38.0 34.0 40.0 27.0 41.0 29 35.551971485595814 38.0 34.0 40.0 27.0 41.0 30 35.47673051335211 38.0 34.0 40.0 27.0 41.0 31 35.40774012129839 38.0 34.0 40.0 27.0 41.0 32 35.27953940650432 38.0 34.0 40.0 27.0 41.0 33 35.14626976513909 38.0 34.0 40.0 27.0 41.0 34 35.073372760466626 38.0 33.0 40.0 26.0 40.0 35 34.92672393786552 38.0 33.0 40.0 26.0 40.0 36 34.790431506637375 38.0 33.0 40.0 25.0 40.0 37 34.768809759569265 37.0 33.0 40.0 25.0 40.0 38 34.61136360120061 37.0 33.0 40.0 25.0 40.0 39 34.50431661354705 37.0 33.0 39.0 25.0 40.0 40 34.39566249961321 37.0 33.0 39.0 24.0 40.0 41 34.27680090973791 37.0 33.0 39.0 24.0 40.0 42 34.24851471361822 37.0 33.0 39.0 24.0 40.0 43 32.829594331156976 36.0 30.0 38.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 0.0 13 2.0 14 3.0 15 12.0 16 33.0 17 54.0 18 121.0 19 212.0 20 396.0 21 624.0 22 1131.0 23 1701.0 24 2605.0 25 3832.0 26 5404.0 27 7560.0 28 9977.0 29 12956.0 30 16814.0 31 21338.0 32 27574.0 33 34893.0 34 45326.0 35 59882.0 36 77843.0 37 91503.0 38 74528.0 39 20744.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.43189343070211 20.26661664139617 13.498893771080237 25.80259615682149 2 19.474270507782283 22.265757960206702 33.68931212674443 24.57065940526658 3 20.640258996812825 23.335048117090075 30.423809450134602 25.600883435962494 4 16.63404709595569 16.3230652597704 32.896192406473375 34.14669523780054 5 14.574952811213912 37.70635424080206 33.5303400686945 14.188352879289537 6 35.32428752668874 35.053918990005265 15.112595537952162 14.509197945353838 7 29.228424668131325 30.974022960051983 20.787433858340812 19.01011851347588 8 26.36518705325371 34.93826778475725 19.946351765324753 18.750193396664294 9 26.427073985827892 14.803354271745519 18.666839434353435 40.10273230807315 10 16.770971934276076 27.926671720766162 32.3455921032274 22.956764241730358 11 36.3599266639849 21.72753504347557 21.01100040226506 20.90153789027447 12 21.567402605439863 25.78538385369929 28.016601169663026 24.63061237119782 13 30.112827613949317 19.083609245907727 25.33148188260049 25.472081257542474 14 23.122118389702013 20.76248568864684 23.493439985147134 32.621955936504 15 25.736454497632828 28.401460531608752 21.418873967261813 24.44321100349661 16 26.149356375901228 26.41759754927747 22.458767831172448 24.974278243648854 17 24.811244855648727 26.78195686480799 23.624949716867285 24.78184856267599 18 23.528638178048705 25.07233035244608 25.995606027787233 25.40342544171798 19 25.658902435250795 25.450034037812912 25.143693721570692 23.747369805365597 20 25.348113995729804 24.410333570566575 25.56877958968964 24.672772844013988 21 25.295703499706036 25.82406318655816 23.82376148776186 25.056471825973947 22 25.3241328093573 24.915679054367672 24.261418139059938 25.49876999721509 23 24.075177151344494 25.492001113964786 24.832325092056813 25.600496642633907 24 26.136205402729214 25.70899217130303 24.15988489030541 23.994917535662346 25 25.646331652071662 24.828070365442336 24.846636445214592 24.678961537271405 26 25.935072871863106 25.39452919516044 23.886808800321813 24.78358913265464 27 25.667798681808335 24.570079215273697 24.310154098462107 25.45196800445586 28 24.474154469783706 25.138665408299037 25.2593449268187 25.12783519509855 29 24.428512857010244 25.724850697775164 24.705650276944024 25.14098616827057 30 24.017544945384785 26.8945137234273 24.433927963610483 24.654013367577434 31 25.607652319212796 25.18063248445091 24.607017978153912 24.60469721818238 32 24.09026209115945 25.568199399696756 24.71299935018721 25.62853915895659 33 24.68689080050747 24.87990067147322 24.87100442491568 25.562204103103632 34 25.196684407587338 24.838320388649937 24.95938670049819 25.005608503264536 35 25.517722870315936 24.738527709874063 24.94062722406164 24.80312219574837 36 24.534881022372126 25.844950026301944 24.84238171860012 24.77778723272581 37 26.24121979144104 24.0680214747656 24.54841878887273 25.14233994492063 38 24.811438252313025 24.705843673608317 25.952285174985303 24.530432899093356 39 25.12009932852678 24.12313952408949 25.876086889253337 24.880674258130394 40 24.442824210168023 23.821827521118916 26.708079339047558 25.027268929665503 41 23.736346195500822 24.545131045579726 27.097386824272057 24.6211359346474 42 25.105207785376116 23.544690101185132 26.395743726212213 24.954358387226538 43 23.838266237583934 23.527864591391527 26.988117708945758 25.64575146207878 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 5.0 2 4.0 3 18.0 4 32.0 5 32.0 6 56.5 7 81.0 8 78.5 9 76.0 10 113.5 11 151.0 12 151.0 13 272.5 14 394.0 15 783.5 16 1173.0 17 1164.5 18 1156.0 19 1156.0 20 1390.0 21 1624.0 22 2101.5 23 2579.0 24 3202.0 25 3825.0 26 3825.0 27 4503.0 28 5181.0 29 8026.5 30 10872.0 31 11450.5 32 12029.0 33 12029.0 34 13854.0 35 15679.0 36 17236.0 37 18793.0 38 23510.5 39 28228.0 40 28228.0 41 31390.0 42 34552.0 43 32429.0 44 30306.0 45 33851.0 46 37396.0 47 37396.0 48 40461.5 49 43527.0 50 45243.5 51 46960.0 52 50591.0 53 54222.0 54 54222.0 55 46081.0 56 37940.0 57 34852.0 58 31764.0 59 28676.5 60 25589.0 61 25589.0 62 23709.5 63 21830.0 64 19298.0 65 16766.0 66 14495.0 67 12224.0 68 12224.0 69 10138.5 70 8053.0 71 7068.5 72 6084.0 73 4810.5 74 3537.0 75 3537.0 76 2676.5 77 1816.0 78 1527.5 79 1239.0 80 942.0 81 645.0 82 645.0 83 469.5 84 294.0 85 241.5 86 189.0 87 161.0 88 133.0 89 133.0 90 115.5 91 98.0 92 58.5 93 19.0 94 11.0 95 3.0 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 517072.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.32306449386963 #Duplication Level Percentage of deduplicated Percentage of total 1 87.92994983267049 46.007644360375394 2 6.750897828213713 7.064553249143011 3 1.8237386806023714 2.8627078981536775 4 0.8413455031027026 1.760871000818796 5 0.452556905429417 1.1839582074964723 6 0.33063015803361345 1.037974984944664 7 0.23073700850227102 0.845100716389081 8 0.1520013880975579 0.6362542746068984 9 0.13157493038932014 0.6195963211683124 >10 1.0035568497937553 10.890071994106032 >50 0.17465140867065526 6.4319252904106765 >100 0.16760602273466804 16.438263406004246 >500 0.009270244620280312 3.198015883401216 >1k 0.00148323913924485 1.023062412981533 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 1705 0.32974131262183987 No Hit CTGTAGAACAGAGCAGGTGAAGAGAGAGCAAGCCCTCTTTGGG 1256 0.24290621035368382 No Hit TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA 1209 0.2338165671318501 No Hit GGTGAAGAGAGAGCAAGCCCTCTTTGGGAACTTTTGATGTGCT 1103 0.2133165207166507 No Hit CTTCTGGGAAATCTCGCCTTCCTCGGCCTTTCACCAGCCAAGC 926 0.17908531113655352 No Hit CAGTGATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAG 836 0.16167961135006345 No Hit ATTCAAGATCATCTTCACAACATCACCTGCTAGCCACGTGGGA 799 0.15452393477117307 No Hit CGCCTGGAGTCCAGATACTTGCTGTAGTCACTGGTGAATGTGC 793 0.15336355478540706 No Hit GGAATAACATTGCCAAACGTCACGATGAATTTGAGAGACATGC 753 0.1456276882136337 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 753 0.1456276882136337 No Hit GGATCACTGAGTGGGTCTGCCTGGGAAGCTGAGAATGATCTGG 747 0.14446730822786769 No Hit CTTCAAGACACAGAGGAGAAATCCAGATCATTCTCAGCTTCCC 746 0.14427391156357336 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC 696 0.13460407834885663 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 692 0.1338304916916793 No Hit CTTTATAAACTGGTTGATTCAGACCAAAATCACTGACAGGAAA 676 0.13073614506296996 No Hit GATGAACACCATTCTTGATAATCTTGCCGCCAGGGACTTTATA 645 0.12474084846984558 No Hit TATCTGGACTCCAGGCGTGCCCAAGATTTTGTGCAGTGGTTGA 625 0.1208729151839589 No Hit CTATATCACTATTCAAGATCATCTTCACAACATCACCTGCTAG 616 0.1191323452053099 No Hit GGTAAAGGTCCCTTCAGCATGTCTCTCAAATTCATCGTGACGT 609 0.11777856855524957 No Hit GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC 590 0.1141040319336572 No Hit GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC 589 0.11391063526936289 No Hit ATCCTGATCAGATGAACGAGGACAAGCGCCATTCACAGGGCAC 588 0.11371723860506855 No Hit GTACAAGGCAGCTGGCAACGTTCCCTTCAAGACACAGAGGAGA 587 0.11352384194077421 No Hit CTACCAGAAGACAGCAGAAATGAAAAGCATTTACTTTGTGGCT 554 0.10714175201906118 No Hit TCATCAACCACTGCACAAAATCTTGGGCACGCCTGGAGTCCAG 545 0.10540118204041217 No Hit CTCCAGGCGTGCCCAAGATTTTGTGCAGTGGTTGATGAATACC 545 0.10540118204041217 No Hit ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT 543 0.10501438871182349 No Hit CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGC 519 0.10037286876875948 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.9339666429433425E-4 0.0 5 0.0 0.0 0.0 1.9339666429433425E-4 0.0 6 0.0 0.0 0.0 1.9339666429433425E-4 0.0 7 0.0 0.0 0.0 1.9339666429433425E-4 0.0 8 0.0 0.0 0.0 1.9339666429433425E-4 0.0 9 0.0 0.0 0.0 1.9339666429433425E-4 0.0 10 0.0 0.0 0.0 1.9339666429433425E-4 0.0 11 0.0 0.0 0.0 1.9339666429433425E-4 0.0 12 0.0 0.0 0.0 1.9339666429433425E-4 0.0 13 0.0 0.0 0.0 3.867933285886685E-4 0.0 14 0.0 0.0 0.0 3.867933285886685E-4 0.0 15 0.0 0.0 0.0 3.867933285886685E-4 0.0 16 0.0 0.0 0.0 7.73586657177337E-4 0.0 17 0.0 0.0 0.0 9.669833214716713E-4 0.0 18 0.0 0.0 0.0 0.0013537766500603397 0.0 19 0.0 0.0 0.0 0.0013537766500603397 0.0 20 0.0 0.0 0.0 0.0013537766500603397 0.0 21 0.0 0.0 0.0 0.0017405699786490082 0.0 22 0.0 0.0 0.0 0.0017405699786490082 0.0 23 0.0 0.0 0.0 0.002127363307237677 0.0 24 0.0 0.0 0.0 0.002320759971532011 0.0 25 0.0 0.0 0.0 0.002514156635826345 0.0 26 0.0 0.0 0.0 0.003867933285886685 0.0 27 0.0 0.0 0.0 0.006962279914596033 0.0 28 0.0 0.0 0.0 0.020693443079493765 0.0 29 0.0 0.0 0.0 0.04409443945910821 0.0 30 0.0 0.0 0.0 0.07890583903208838 0.0 31 0.0 0.0 0.0 0.20538725748058298 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGTA 40 5.9339072E-5 27.75 2 ATACCAT 35 8.8627683E-4 26.428572 6 CTTATAC 105 1.8189894E-12 24.666668 37 TATAGCC 45 1.3218368E-4 24.666668 3 CTCTAAC 40 0.0019297585 23.125 1 TAGTACG 40 0.0019297585 23.125 4 GGTATCA 265 0.0 23.037735 1 TTTTGTC 50 2.699317E-4 22.2 26 AAGACGG 95 7.1213435E-9 21.421053 5 CGAGCCG 80 6.9448834E-7 20.8125 15 TAAAACC 45 0.0038230037 20.555557 4 CTAACCA 45 0.0038230037 20.555557 9 AGGTTAT 45 0.0038230037 20.555557 1 ACGGACC 90 9.452924E-8 20.555557 8 GTATAGT 45 0.0038230037 20.555557 1 CAAGACG 90 9.452924E-8 20.555557 4 CGGGTTG 65 6.892748E-5 19.923077 14 TCTTATA 230 0.0 19.304348 37 TAGAATA 50 0.0070297765 18.5 4 GCGTTAT 100 2.8673276E-7 18.5 1 >>END_MODULE