FastQCFastQC Report
Fri 10 Feb 2017
ERR1630343.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630343.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8522
Sequences flagged as poor quality0
Sequence length43
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT310.36376437455996247No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT280.32856137057028867No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT220.2581553625909411No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG120.14081201595869514No Hit
CTGTAGAACAGAGCAGGTGAAGAGAGAGCAAGCCCTCTTTGGG110.12907768129547054No Hit
ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA90.10560901196902137No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGCAG250.005198702729.5999987
ACGCAGA250.005198702729.5999988
CGCAGAG250.005198702729.5999989
GGTATCA250.005198702729.5999981
Produced by FastQC (version 0.11.5)