FastQCFastQC Report
Fri 10 Feb 2017
ERR1630324.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630324.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6861
Sequences flagged as poor quality0
Sequence length43
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC380.5538551231598892No Hit
AGGTAGAGAGCTTCCACCAGGTGTGAGCCGCACAGGTGTTGGT160.23320215711995335No Hit
CCCAAGACCCGCCGGGAGGCAGAGGACCTGCAGGTGGGGCAGG150.21862702229995626No Hit
CTGGGGACCTGACCCAGCCGCAGCCTTTGTGAACCAACACCTG130.1894767526599621No Hit
GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT120.17490161783996502No Hit
GAACAATGCTGTACCAGCATCTGCTCCCTCTACCAGCTGGAGA120.17490161783996502No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC110.16032648301996794No Hit
GGTCTTGGGTGTGTAGAAGAAGCCTCGTTCCCCGCACACTAGG100.14575134819997085No Hit
CCATCAAGCAGATCACTGTCCTTCTGCCATGGCCCTGTGGATG100.14575134819997085No Hit
GGTGTGAGCCGCACAGGTGTTGGTTCACAAAGGCTGCGGCTGG100.14575134819997085No Hit
TTGTGGAACAATGCTGTACCAGCATCTGCTCCCTCTACCAGCT100.14575134819997085No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA100.14575134819997085No Hit
GATCTGCTTGATGGCCTCTTCTGATGCAGCCTGTCCTGGAGCT90.13117621337997376No Hit
TGCTGGTACAGCATTGTTCCACAATGCCACGCTTCTGCAGGGA90.13117621337997376No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG90.13117621337997376No Hit
CTGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCATCT90.13117621337997376No Hit
CTCCAGGGCCAAGGGCTGCAGGCTGCCTGCACCAGGGCCCCCG90.13117621337997376No Hit
CTTCTGCAGGGACCCCTCCAGGGCCAAGGGCTGCAGGCTGCCT80.11660107855997667No Hit
ACCAACACCTGTGCGGCTCACACCTGGTGGAAGCTCTCTACCT80.11660107855997667No Hit
CATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATG80.11660107855997667No Hit
CATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACG80.11660107855997667No Hit
GTACAGCATTGTTCCACAATGCCACGCTTCTGCAGGGACCCCT80.11660107855997667No Hit
CTGGTAGAGGGAGCAGATGCTGGTACAGCATTGTTCCACAATG80.11660107855997667No Hit
GGTGTTGGTTCACAAAGGCTGCGGCTGGGTCAGGTCCCCAGAG80.11660107855997667No Hit
CCTGCGGGCTGCGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGA70.1020259437399796No Hit
CTAGGTAGAGAGCTTCCACCAGGTGTGAGCCGCACAGGTGTTG70.1020259437399796No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGA70.1020259437399796No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTC70.1020259437399796No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC70.1020259437399796No Hit
GCACAGGTGTTGGTTCACAAAGGCTGCGGCTGGGTCAGGTCCC70.1020259437399796No Hit
GCTCCACCTGCCCCACCTGCAGGTCCTCTGCCTCCCGGCGGGG70.1020259437399796No Hit
CACCAGGTGTGAGCCGCACAGGTGTTGGTTCACAAAGGCTGCG70.1020259437399796No Hit
GTGTAGAAGAAGCCTCGTTCCCCGCACACTAGGTAGAGAGCTT70.1020259437399796No Hit
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCCT70.1020259437399796No Hit
CTACTGCAACTAGACGCAGCCCGCAGGCAGCCCCCCACCCGCC70.1020259437399796No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC70.1020259437399796No Hit
CACCTGGTGGAAGCTCTCTACCTAGTGTGCGGGGAACGAGGCT70.1020259437399796No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)