##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630323.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2709198 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.670768249496714 31.0 31.0 34.0 30.0 34.0 2 31.863115578853964 33.0 31.0 34.0 30.0 34.0 3 31.99803816480006 33.0 31.0 34.0 30.0 34.0 4 35.68806303562899 37.0 35.0 37.0 33.0 37.0 5 35.60964241077987 37.0 35.0 37.0 33.0 37.0 6 35.66762968228974 37.0 35.0 37.0 33.0 37.0 7 35.64020791392877 37.0 35.0 37.0 33.0 37.0 8 35.624371492965814 37.0 35.0 37.0 33.0 37.0 9 37.29544573707791 39.0 37.0 39.0 34.0 39.0 10 37.194356411011675 39.0 37.0 39.0 34.0 39.0 11 37.2812204940355 39.0 37.0 39.0 34.0 39.0 12 37.164162235465994 39.0 37.0 39.0 33.0 39.0 13 37.204048209100996 39.0 37.0 39.0 34.0 39.0 14 38.359010674007585 40.0 38.0 41.0 34.0 41.0 15 38.33891801189873 40.0 38.0 41.0 34.0 41.0 16 38.325672394561046 40.0 38.0 41.0 34.0 41.0 17 38.31275307304966 40.0 38.0 41.0 33.0 41.0 18 38.28278516372742 40.0 38.0 41.0 33.0 41.0 19 38.305068141937205 40.0 38.0 41.0 34.0 41.0 20 38.25777333365815 40.0 38.0 41.0 34.0 41.0 21 38.2230099092056 40.0 38.0 41.0 33.0 41.0 22 38.184375966614475 40.0 38.0 41.0 33.0 41.0 23 38.125036265344946 40.0 38.0 41.0 33.0 41.0 24 38.10045740473749 40.0 37.0 41.0 33.0 41.0 25 38.07049872323839 40.0 37.0 41.0 33.0 41.0 26 37.87818793606078 40.0 37.0 41.0 33.0 41.0 27 37.76963182462116 40.0 37.0 41.0 33.0 41.0 28 37.66377134487771 40.0 37.0 41.0 32.0 41.0 29 37.563434270953984 40.0 37.0 41.0 32.0 41.0 30 37.4789908304967 39.0 37.0 41.0 32.0 41.0 31 37.34110648243502 39.0 36.0 41.0 32.0 41.0 32 37.2169778657743 39.0 36.0 41.0 31.0 41.0 33 37.12878866734731 39.0 36.0 41.0 31.0 41.0 34 37.0046515610893 39.0 36.0 41.0 31.0 41.0 35 36.88702929796936 39.0 35.0 41.0 31.0 41.0 36 36.763084130432695 39.0 35.0 40.0 30.0 41.0 37 36.67112112145365 39.0 35.0 40.0 30.0 41.0 38 36.54194562376024 39.0 35.0 40.0 30.0 41.0 39 36.417127504154365 39.0 35.0 40.0 30.0 41.0 40 36.27426566829003 39.0 35.0 40.0 30.0 41.0 41 36.10388498736526 39.0 35.0 40.0 29.0 41.0 42 36.001194449427466 39.0 35.0 40.0 29.0 41.0 43 34.802912522451294 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 9.0 11 12.0 12 12.0 13 6.0 14 7.0 15 12.0 16 32.0 17 65.0 18 147.0 19 353.0 20 683.0 21 1242.0 22 2233.0 23 3598.0 24 5947.0 25 9137.0 26 13775.0 27 19883.0 28 27567.0 29 37852.0 30 50270.0 31 64613.0 32 83141.0 33 106298.0 34 138906.0 35 183896.0 36 253358.0 37 384305.0 38 647048.0 39 674787.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.42203781340456 19.254923412759055 12.858491701234092 25.4645470726023 2 17.75673095875606 21.83756964238125 35.05310427661618 25.35259512224651 3 19.214210257057623 23.751161782933547 30.7265471183723 26.308080841636528 4 14.027066312613549 15.716791463746835 35.258331063288836 34.99781116035078 5 14.187335144939572 37.5524417189146 33.71713695344526 14.543086182700563 6 33.61507722949744 36.100351469327826 15.964134035238473 14.320437265936267 7 28.72661946450573 31.70185420187081 21.241452267423792 18.330074066199664 8 28.156524550808026 33.71558667915745 19.75182323329635 18.376065536738178 9 27.22554792968251 13.94874054978632 19.900575742341463 38.925135778189706 10 16.94556839330311 27.584953185407635 32.20325720010129 23.26622122118797 11 35.14719116136953 22.587385639587804 21.43169306931424 20.83373012972843 12 21.753633363083836 26.262089371098014 29.280510320766517 22.703766945051633 13 30.04265468969046 19.51319172685053 25.290399594271072 25.153753989187944 14 22.440700162926444 20.88326508435338 26.253304483467062 30.422730269253112 15 24.991455035770734 27.82081634491093 22.81763828262091 24.370090336697427 16 23.7466216939478 26.894970393452233 24.37241574812915 24.98599216447081 17 22.667556967043385 27.046528160732436 26.592297794402626 23.693617077821553 18 22.720524671877065 25.279400029086098 27.812880417009016 24.187194882027818 19 23.42626858575859 25.62175226764526 27.896041559162526 23.055937587433625 20 23.750128266741672 25.69553794148674 27.4436198461685 23.110713945603088 21 25.030027336503274 25.48370403344458 26.62249123172245 22.86377739832969 22 24.4733312220074 25.911136801370738 26.705430906120558 22.910101070501305 23 23.631458461138685 25.805312125581075 26.774344289343194 23.78888512393705 24 23.636293840464965 25.959933530144347 27.007549835781656 23.39622279360903 25 23.710079514306447 25.55560723136515 27.152721949447773 23.581591304880632 26 23.715653119484067 26.214547626271685 27.11643814885438 22.95336110538986 27 23.777258066778433 26.16361004252919 26.59672714951067 23.462404741181707 28 23.13972622156077 25.974402756830617 27.657446964009274 23.228424057599334 29 22.84056019530503 26.177857801460064 27.886629179557936 23.09495282367697 30 22.80730312070214 26.696646018489606 27.45657570985952 23.039475150948732 31 23.095137380139803 26.69557559100516 26.892681893313075 23.316605135541955 32 22.471631826097614 26.45561527802693 27.38116593914509 23.69158695673037 33 22.79405196667058 26.447273325906785 27.495037276714363 23.263637430708275 34 23.42479213405591 26.305091026938598 27.212481332113786 23.057635506891707 35 23.333805797878192 26.217426707091914 27.786230463775624 22.662537031254267 36 22.886551665843545 26.575281688529223 26.83100312343358 23.707163522193653 37 22.70247504981179 25.754706743471683 27.72049145171375 23.822326755002774 38 22.786558974279473 25.69413531236919 28.099201313451434 23.420104399899895 39 22.171173904602025 25.832700304665806 28.361050022921912 23.63507576781025 40 22.391497409934598 25.288923142568393 29.11998310939252 23.199596338104485 41 21.48056362067298 25.397996012103953 29.41878002272259 23.702660344500476 42 21.67205940651071 25.764525147294513 28.98374352852763 23.57967191766715 43 21.367467420247614 24.607134657562867 29.653794222496842 24.371603699692677 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 395.0 1 420.0 2 445.0 3 1415.0 4 2385.0 5 2385.0 6 3222.5 7 4060.0 8 3944.5 9 3829.0 10 5143.0 11 6457.0 12 6457.0 13 12286.5 14 18116.0 15 30959.5 16 43803.0 17 37992.0 18 32181.0 19 32181.0 20 36615.5 21 41050.0 22 37217.0 23 33384.0 24 39407.5 25 45431.0 26 45431.0 27 50285.0 28 55139.0 29 61765.0 30 68391.0 31 77879.0 32 87367.0 33 87367.0 34 97205.0 35 107043.0 36 119012.0 37 130981.0 38 136553.5 39 142126.0 40 142126.0 41 149602.5 42 157079.0 43 159325.0 44 161571.0 45 165402.5 46 169234.0 47 169234.0 48 169648.0 49 170062.0 50 170531.0 51 171000.0 52 173954.5 53 176909.0 54 176909.0 55 174291.0 56 171673.0 57 164002.5 58 156332.0 59 143555.0 60 130778.0 61 130778.0 62 121894.0 63 113010.0 64 99331.5 65 85653.0 66 72884.5 67 60116.0 68 60116.0 69 52519.5 70 44923.0 71 39609.0 72 34295.0 73 33843.0 74 33391.0 75 33391.0 76 29679.5 77 25968.0 78 20017.0 79 14066.0 80 9533.5 81 5001.0 82 5001.0 83 3595.0 84 2189.0 85 1757.0 86 1325.0 87 1185.5 88 1046.0 89 1046.0 90 924.5 91 803.0 92 463.5 93 124.0 94 85.0 95 46.0 96 46.0 97 30.5 98 15.0 99 10.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2709198.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.99882440900513 #Duplication Level Percentage of deduplicated Percentage of total 1 77.42457704944457 39.485624098861116 2 13.119695379048801 13.381780818714917 3 4.265425307023009 6.525950287877796 4 1.8282227748297433 3.7294884909634485 5 0.8966685564146559 2.2864521130833575 6 0.5312337452672253 1.625537789701283 7 0.3408459234753773 1.2167918981292176 8 0.24119350916115295 0.9840468337841128 9 0.16996429862564186 0.7801181479267938 >10 0.9802735096669318 9.424410431979908 >50 0.10002781479430863 3.558979626625953 >100 0.08930547820684358 9.294182353091767 >500 0.00946110160625714 3.2727839366311713 >1k 0.002816663836971991 2.379597089782224 >5k 7.222214966594849E-5 0.25948459117598627 >10k+ 2.1666644899784546E-4 1.7947714916711792 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21709 0.8013072503375537 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13569 0.5008493288419673 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13450 0.4964568850264912 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7045 0.2600400561346937 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 4875 0.17994255126424868 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 3560 0.13140420153861032 No Hit GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT 2958 0.10918360341326105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 1.1073387770107611E-4 0.0 0.0 0.0 0.0 6 1.1073387770107611E-4 0.0 0.0 0.0 0.0 7 1.1073387770107611E-4 0.0 0.0 0.0 0.0 8 1.1073387770107611E-4 0.0 0.0 0.0 0.0 9 1.1073387770107611E-4 0.0 0.0 0.0 0.0 10 1.1073387770107611E-4 0.0 0.0 0.0 0.0 11 1.4764517026810147E-4 0.0 0.0 0.0 0.0 12 1.4764517026810147E-4 0.0 0.0 7.382258513405074E-5 0.0 13 1.4764517026810147E-4 0.0 0.0 1.8455646283512686E-4 0.0 14 1.4764517026810147E-4 0.0 0.0 2.583790479691776E-4 0.0 15 2.9529034053620294E-4 0.0 0.0 3.3220163310322833E-4 0.0 16 3.3220163310322833E-4 0.0 0.0 9.96604899309685E-4 0.0 17 3.691129256702537E-4 0.0 0.0 0.0014764517026810149 0.0 18 4.0602421823727905E-4 0.0 0.0 0.0016610081655161417 0.0 19 4.4293551080430444E-4 0.0 0.0 0.0019193872134853193 0.0 20 4.4293551080430444E-4 0.0 0.0 0.0023254114317225985 0.0 21 4.4293551080430444E-4 0.0 0.0 0.0035434840864344355 0.0 22 4.4293551080430444E-4 0.0 0.0 0.004909201911414375 0.0 23 4.4293551080430444E-4 0.0 0.0 0.007382258513405074 0.0 24 5.167580959383552E-4 0.0 0.0 0.010778097429571408 0.0 25 5.167580959383552E-4 0.0 0.0 0.012476016887654576 0.0 26 5.536693885053806E-4 0.0 0.0 0.01531818641531553 0.0 27 5.536693885053806E-4 0.0 0.0 0.028126404936073334 0.0 28 5.536693885053806E-4 0.0 0.0 0.06850735900439908 0.0 29 5.905806810724059E-4 0.0 0.0 0.1319578709271157 0.0 30 6.644032662064567E-4 0.0 0.0 0.23040028820337236 0.0 31 6.644032662064567E-4 0.0 0.0 0.5210767171686972 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1595 0.0 19.60188 37 GACAGGC 1460 0.0 19.00685 7 TAGACCG 50 0.0070372876 18.499998 5 CGGACCA 495 0.0 18.313131 9 TGCATCA 1460 0.0 18.246574 14 ACGGACC 500 0.0 18.13 8 CGAATTA 300 0.0 17.883333 15 AAGACGG 560 0.0 17.839285 5 GACGGAC 490 0.0 17.367346 7 CAGGACA 1780 0.0 17.35674 4 GCATCAG 1560 0.0 17.314102 15 TATACTG 310 0.0 17.306452 5 CCAGGAC 1865 0.0 17.06166 3 CGCAAGA 525 0.0 16.914286 2 TCTAGCG 230 0.0 16.891304 28 ACAGGCT 1680 0.0 16.627977 8 GCTGCAT 1590 0.0 16.522013 12 ATCAAGC 1585 0.0 16.223974 30 CAAGACG 620 0.0 16.112904 4 GGACAGG 1815 0.0 16.104685 6 >>END_MODULE