##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630252.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2700647 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.824619804069172 31.0 31.0 34.0 30.0 34.0 2 32.01496011881597 33.0 31.0 34.0 30.0 34.0 3 32.168332995759904 34.0 31.0 34.0 30.0 34.0 4 35.81968506065398 37.0 35.0 37.0 35.0 37.0 5 35.73503386410738 37.0 35.0 37.0 35.0 37.0 6 35.8000608743016 37.0 35.0 37.0 35.0 37.0 7 35.775158323172185 37.0 35.0 37.0 35.0 37.0 8 35.761367553775074 37.0 35.0 37.0 33.0 37.0 9 37.450957863060225 39.0 37.0 39.0 35.0 39.0 10 37.377253302634514 39.0 37.0 39.0 34.0 39.0 11 37.44199223371288 39.0 37.0 39.0 35.0 39.0 12 37.33218039973384 39.0 37.0 39.0 34.0 39.0 13 37.3692711413228 39.0 37.0 39.0 34.0 39.0 14 38.583701979562676 40.0 38.0 41.0 34.0 41.0 15 38.57275904625818 40.0 38.0 41.0 34.0 41.0 16 38.548319347178655 40.0 38.0 41.0 34.0 41.0 17 38.53741047978503 40.0 38.0 41.0 34.0 41.0 18 38.52244480674446 40.0 38.0 41.0 34.0 41.0 19 38.525752902915485 40.0 38.0 41.0 34.0 41.0 20 38.4857102760931 40.0 38.0 41.0 34.0 41.0 21 38.44106208623341 40.0 38.0 41.0 34.0 41.0 22 38.40827105504718 40.0 38.0 41.0 34.0 41.0 23 38.36744009861341 40.0 38.0 41.0 34.0 41.0 24 38.35237148727694 40.0 38.0 41.0 34.0 41.0 25 38.32879750667155 40.0 38.0 41.0 34.0 41.0 26 38.16604872832325 40.0 38.0 41.0 33.0 41.0 27 38.06312043003029 40.0 38.0 41.0 33.0 41.0 28 37.96862862862122 40.0 37.0 41.0 33.0 41.0 29 37.91149528242676 40.0 37.0 41.0 33.0 41.0 30 37.8483704090168 40.0 37.0 41.0 33.0 41.0 31 37.740453676470864 40.0 37.0 41.0 33.0 41.0 32 37.65704329369962 40.0 37.0 41.0 33.0 41.0 33 37.58747366834688 40.0 37.0 41.0 32.0 41.0 34 37.49791549950808 40.0 37.0 41.0 32.0 41.0 35 37.397789862947654 40.0 37.0 41.0 32.0 41.0 36 37.298342212069926 39.0 36.0 41.0 31.0 41.0 37 37.24396265043154 39.0 36.0 41.0 31.0 41.0 38 37.13555307302287 39.0 36.0 41.0 31.0 41.0 39 37.04070580123948 39.0 36.0 41.0 31.0 41.0 40 36.92310101986672 39.0 36.0 41.0 31.0 41.0 41 36.79954025831588 39.0 35.0 41.0 30.0 41.0 42 36.73245114966895 39.0 35.0 41.0 30.0 41.0 43 35.58017986060377 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 12.0 11 11.0 12 5.0 13 9.0 14 7.0 15 8.0 16 28.0 17 61.0 18 80.0 19 183.0 20 419.0 21 840.0 22 1529.0 23 2605.0 24 4438.0 25 6851.0 26 10400.0 27 15629.0 28 22114.0 29 30989.0 30 41691.0 31 54511.0 32 71739.0 33 93520.0 34 123827.0 35 166046.0 36 234421.0 37 357413.0 38 647548.0 39 813709.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.896498505728445 19.25075731852404 12.476491744385697 25.376252431361817 2 18.25688436881977 20.925541175873782 34.332439596881784 26.485134858424665 3 20.084927796931623 22.838268015034917 29.60123999915576 27.475564188877705 4 14.182416287652552 15.226129146089807 35.36908007599661 35.22237449026104 5 14.483603373561966 36.65106916972118 34.34906524251411 14.516262214202744 6 34.752598173696896 35.46716768241092 15.458406818810456 14.32182732508173 7 29.650709626248823 30.560898925331596 21.0475860043908 18.740805444028783 8 28.31499266657212 32.65547107785653 19.872089910306677 19.157446345264674 9 26.901183309036686 14.281207429182711 19.773965275728372 39.04364398605223 10 17.53083612926828 26.735815528649248 32.35583917483477 23.377509167247702 11 36.10531106064584 21.975289625041704 21.148783976580425 20.770615337732032 12 22.729442241062976 25.664183434562162 28.493912754980567 23.112461569394295 13 30.915332511061237 19.262717415493398 24.768805401076115 25.05314467236925 14 22.7967224150361 20.666899450390964 25.12686774687695 31.40951038769599 15 25.382139909436518 28.12326083342251 22.054640980476158 24.439958276664814 16 24.717373281291483 26.56011689050809 23.93848585172368 24.78402397647675 17 23.85439489129827 26.346871694079233 25.101429398214574 24.69730401640792 18 23.697099250661044 24.90058863672298 27.006713576413354 24.39559853620262 19 24.742589460969906 25.03229781604186 26.92995419245833 23.295158530529907 20 25.37069820676305 24.691527622825195 25.779341024576702 24.158433145835055 21 25.399246921200735 24.720668787886755 25.940857875908996 23.939226415003514 22 25.222400409975833 24.84363932050357 26.41741034648364 23.516549923036962 23 24.57088986453987 24.706412944749907 25.833179975020798 24.889517215689423 24 23.983326958317765 25.35999706736941 26.712302644514445 23.944373329798378 25 24.50886768985358 25.38602786665566 25.789597826002435 24.315506617488328 26 24.33635347381572 25.81459183669691 26.02313445629881 23.825920233188565 27 24.576592201794607 24.50679411267004 26.327839217787442 24.588774467747914 28 24.008654222488165 25.32578304384098 26.257078396399088 24.408484337271773 29 24.04264607703265 25.7015448520299 26.604143377494356 23.65166569344309 30 24.315173364012402 25.712579244899462 25.793189557909642 24.179057833178494 31 23.669957606455046 26.26840901458058 26.257263537219046 23.80436984174533 32 23.502738417868013 25.38225099392849 26.052571846672297 25.062438741531196 33 22.92943135478276 25.718614835630127 26.654946018491128 24.697007791095984 34 24.898885341179355 24.36308780821781 26.409227122241447 24.32879972836139 35 24.068158482023012 24.766213429596686 26.66079646840183 24.50483161997847 36 23.10209368347659 25.89912713509022 26.88329870582864 24.11548047560455 37 24.057864652433285 24.753920079151403 27.064033174272684 24.124182094142625 38 23.979587113754594 25.05966162923181 26.68753080280392 24.273220454209678 39 23.922045346911315 24.516162238159968 27.06251501954902 24.4992773953797 40 22.99641530344395 24.34920224672088 27.894797061593017 24.75958538824215 41 22.135547518798273 24.83878863102064 28.26204239206383 24.763621458117257 42 22.940761972964257 24.614953379690128 28.537754101146874 23.906530546198745 43 22.97975262964764 24.326133700553978 28.1459220697855 24.548191600012885 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 586.0 1 500.5 2 415.0 3 984.5 4 1554.0 5 1554.0 6 2030.5 7 2507.0 8 2287.0 9 2067.0 10 2936.5 11 3806.0 12 3806.0 13 6978.0 14 10150.0 15 15524.5 16 20899.0 17 20464.5 18 20030.0 19 20030.0 20 23737.5 21 27445.0 22 27236.5 23 27028.0 24 32615.5 25 38203.0 26 38203.0 27 44257.5 28 50312.0 29 58276.5 30 66241.0 31 74162.5 32 82084.0 33 82084.0 34 91149.0 35 100214.0 36 110291.0 37 120368.0 38 127521.0 39 134674.0 40 134674.0 41 140970.0 42 147266.0 43 149592.5 44 151919.0 45 157721.0 46 163523.0 47 163523.0 48 173782.0 49 184041.0 50 181617.0 51 179193.0 52 181980.5 53 184768.0 54 184768.0 55 179355.0 56 173942.0 57 171192.0 58 168442.0 59 166919.0 60 165396.0 61 165396.0 62 151339.0 63 137282.0 64 125460.0 65 113638.0 66 98000.0 67 82362.0 68 82362.0 69 72643.5 70 62925.0 71 52239.0 72 41553.0 73 28845.5 74 16138.0 75 16138.0 76 11854.5 77 7571.0 78 6012.5 79 4454.0 80 3738.5 81 3023.0 82 3023.0 83 2267.5 84 1512.0 85 1370.0 86 1228.0 87 1117.0 88 1006.0 89 1006.0 90 861.5 91 717.0 92 415.0 93 113.0 94 77.0 95 41.0 96 41.0 97 24.0 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2700647.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.896730762977114 #Duplication Level Percentage of deduplicated Percentage of total 1 80.52923526801413 42.597332765205856 2 12.252003788267306 12.961818913899029 3 3.4154444850829253 5.419975420899797 4 1.2751776774633545 2.698109211189502 5 0.6560027593531488 1.7350200670636793 6 0.3649740861002727 1.1583561580745856 7 0.23560243412216464 0.8723818967403538 8 0.16279438495251658 0.6889032600446179 9 0.12541607847392872 0.5970690482745437 >10 0.7912138758863515 8.080557184501798 >50 0.09311850481809981 3.4442116120657875 >100 0.08051926488757566 9.011798025723674 >500 0.01240166093310453 4.4229718351194 >1k 0.005815468121170498 5.1559951550573935 >5k 2.8026352391183123E-4 1.1554994461400871 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 9796 0.3627278944638081 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8776 0.32495916719215806 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7421 0.2747860049832503 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 5184 0.1919540021335628 No Hit GGCCTAGGTATGGGAAAAGACACAAAGAGGACACGCTGGCCTT 4724 0.17492104669732847 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 4244 0.1571475279812578 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA 4165 0.15422230302590453 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3648 0.13507874224213678 No Hit GTATGCAGCTGATCTCCGTAGATACATCAACATGCTGACCAGG 3125 0.11571301247441818 No Hit GCTCATGGAGTCGTAGGAGACAGAAGGTGGCATTATAAGTCCA 3036 0.11241750587914674 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.702816399181381E-5 0.0 10 0.0 0.0 0.0 3.702816399181381E-5 0.0 11 0.0 0.0 0.0 1.1108449197544145E-4 0.0 12 0.0 0.0 0.0 1.8514081995906907E-4 0.0 13 0.0 0.0 0.0 1.8514081995906907E-4 0.0 14 0.0 0.0 0.0 2.221689839508829E-4 0.0 15 0.0 0.0 0.0 4.0730980390995197E-4 0.0 16 0.0 0.0 0.0 6.665069518526487E-4 0.0 17 0.0 0.0 0.0 0.0010738167557626005 0.0 18 0.0 0.0 0.0 0.0011478730837462283 0.0 19 0.0 0.0 0.0 0.0013330139037052973 0.0 20 0.0 0.0 0.0 0.0017032955436234354 0.0 21 0.0 0.0 0.0 0.001999520855557946 0.0 22 0.0 0.0 0.0 0.0028881967913614776 0.0 23 7.405632798362763E-5 0.0 0.0 0.004628520498976727 0.0 24 7.405632798362763E-5 0.0 0.0 0.006479928698567418 0.0 25 1.1108449197544145E-4 0.0 0.0 0.007146435650420066 0.0 26 1.1108449197544145E-4 0.0 0.0 0.009368125489928894 0.0 27 1.1108449197544145E-4 0.0 0.0 0.016958899108250727 0.0 28 1.4811265596725525E-4 3.702816399181381E-5 0.0 0.04284158573852858 0.0 29 1.4811265596725525E-4 7.405632798362763E-5 0.0 0.09153362138776375 0.0 30 1.8514081995906907E-4 7.405632798362763E-5 0.0 0.1546296128298145 0.0 31 1.8514081995906907E-4 7.405632798362763E-5 0.0 0.37191087913377796 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3395 0.0 21.033873 1 TATACCG 90 9.4902134E-8 20.555557 5 CTAACGC 60 9.2412194E-4 18.5 3 ATACCGA 80 1.6179882E-5 18.5 6 TCTAGCG 375 0.0 18.253334 28 AAGACGG 530 0.0 18.150944 5 CTAGCGG 375 0.0 17.760002 29 GACGGAC 540 0.0 17.12963 7 GCTTTAT 1480 0.0 17.125002 1 ACGGACC 570 0.0 16.877193 8 CGCAATA 420 0.0 16.738094 36 CAAGACG 620 0.0 16.41129 4 CGCAAGA 610 0.0 16.07377 2 CGTATAC 70 0.0025937087 15.857142 3 TTACGCT 70 0.0025937087 15.857142 4 AGACGGA 605 0.0 15.595041 6 CAATAGT 190 2.7284841E-11 15.578948 4 GTCTAAC 155 7.221388E-9 15.516129 1 TCTTATA 2260 0.0 15.471239 37 CGGTCCA 470 0.0 15.351063 10 >>END_MODULE