ERR1630228.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630228.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	85520
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCAGGGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTGG	124	0.1449953227315248	No Hit
GCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCT	117	0.13681010289990644	No Hit
AGCAGGAACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGA	106	0.12394761459307764	No Hit
GGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTGGAGGCGG	100	0.11693171188026193	No Hit
CTTTAGGAGCGAGGTTCGGAGCCATCGCTGCTGCCTGCTGATC	92	0.10757717492984097	No Hit
GTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAG	90	0.10523854069223575	No Hit
ACGATGGACAGCGCAGCCAGCGCGCACTGGAGGCGGCAGGACA	89	0.10406922357343311	No Hit
CTGCTGATCCGCGCCTAGAGTTTGACCAGCCACTCTCCAGCTC	87	0.10173058933582786	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTTATC	25	0.0054682866	29.6	2
GTTATCT	25	0.0054682866	29.6	3
CGCGCAC	60	1.3133831E-6	24.666668	21
GCGCACT	60	1.3133831E-6	24.666668	22
CTACCCT	40	0.0019166834	23.125	4
AGGCGGC	65	2.6349535E-6	22.76923	31
TCTTATA	50	2.6738647E-4	22.2	37
AACTGGC	50	2.6738647E-4	22.2	7
TCCGCGC	60	3.6746333E-5	21.583334	8
ATCCGCG	60	3.6746333E-5	21.583334	7
CACTGGA	80	6.80644E-7	20.8125	25
CAAGTAC	55	5.089785E-4	20.181818	14
GATCCGC	65	6.807133E-5	19.923077	6
CGCCTAG	65	6.807133E-5	19.923077	12
TGCTGAT	65	6.807133E-5	19.923077	2
GCCTAGA	65	6.807133E-5	19.923077	13
TAGAGTT	70	1.2025354E-4	18.5	16
TATCAAC	50	0.006983053	18.5	1
TGTCACC	60	9.141852E-4	18.5	12
GGCCGTT	50	0.006983053	18.5	13