ERR1630224.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630224.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	678911
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	5133	0.7560637550430027	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	3906	0.5753331438141376	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3142	0.46279998409217116	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1367	0.2013518708637804	No Hit
CCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC	884	0.13020852512332248	No Hit
GATTTAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGAT	715	0.10531571884974614	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	693	0.10207523519283088	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTATA	20	0.0018414049	37.0	2
CTTAAGG	25	0.005494779	29.599998	19
AACCGCG	25	0.005494779	29.599998	35
TCACATT	25	0.005494779	29.599998	26
ATAAGGT	50	2.7180067E-7	29.599998	3
GCGGATC	45	4.00508E-6	28.777777	33
TTGTGCA	40	5.9366008E-5	27.750002	19
ACTGTGC	40	5.9366008E-5	27.750002	8
TGCGGAT	50	9.083933E-6	25.899998	32
CGCCGAA	80	9.767973E-10	25.437502	33
TTAGAGT	60	1.3360604E-6	24.666668	4
GAGGCAC	110	3.6379788E-12	23.545454	7
CGTCTAA	90	3.8216967E-9	22.61111	1
GCCGAAT	90	3.8216967E-9	22.61111	34
TTAGGTT	115	5.456968E-12	22.52174	4
GTGATCG	50	2.700524E-4	22.199999	8
GTTGTGC	50	2.700524E-4	22.199999	18
CTCGCTA	50	2.700524E-4	22.199999	13
GAGCATG	50	2.700524E-4	22.199999	7
GCCGTTT	50	2.700524E-4	22.199999	12