##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630224.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 678911 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.752586126900287 31.0 31.0 34.0 30.0 34.0 2 31.944120805230728 33.0 31.0 34.0 30.0 34.0 3 32.06643433380811 33.0 31.0 34.0 30.0 34.0 4 35.74068176830247 37.0 35.0 37.0 33.0 37.0 5 35.686618717328194 37.0 35.0 37.0 33.0 37.0 6 35.77094052092248 37.0 35.0 37.0 35.0 37.0 7 35.762563870669354 37.0 35.0 37.0 35.0 37.0 8 35.75335795118948 37.0 35.0 37.0 33.0 37.0 9 37.43742257821717 39.0 37.0 39.0 34.0 39.0 10 37.33504686181252 39.0 37.0 39.0 34.0 39.0 11 37.419131520921006 39.0 37.0 39.0 34.0 39.0 12 37.29423444310079 39.0 37.0 39.0 34.0 39.0 13 37.36523638591804 39.0 37.0 39.0 34.0 39.0 14 38.51444298295358 40.0 38.0 41.0 34.0 41.0 15 38.50959256809803 40.0 38.0 41.0 34.0 41.0 16 38.47050791635428 40.0 38.0 41.0 34.0 41.0 17 38.4785413699292 40.0 38.0 41.0 34.0 41.0 18 38.47554244959943 40.0 38.0 41.0 34.0 41.0 19 38.51527077923321 40.0 38.0 41.0 34.0 41.0 20 38.46596976628748 40.0 38.0 41.0 34.0 41.0 21 38.4412610784035 40.0 38.0 41.0 34.0 41.0 22 38.428307981458545 40.0 38.0 41.0 34.0 41.0 23 38.38298097983388 40.0 38.0 41.0 34.0 41.0 24 38.37590936072622 40.0 38.0 41.0 34.0 41.0 25 38.33797508068068 40.0 38.0 41.0 34.0 41.0 26 38.15256786235604 40.0 38.0 41.0 34.0 41.0 27 38.06082535118742 40.0 37.0 41.0 33.0 41.0 28 37.99955958881208 40.0 37.0 41.0 33.0 41.0 29 37.94009376781345 40.0 37.0 41.0 33.0 41.0 30 37.82933403642009 40.0 37.0 41.0 33.0 41.0 31 37.682478262982926 40.0 37.0 41.0 33.0 41.0 32 37.583762820163464 40.0 37.0 41.0 33.0 41.0 33 37.53556651755532 40.0 36.0 41.0 32.0 41.0 34 37.46297084595772 39.0 36.0 41.0 32.0 41.0 35 37.353857869440915 39.0 36.0 41.0 32.0 41.0 36 37.234639002755884 39.0 36.0 41.0 31.0 41.0 37 37.14892231824201 39.0 36.0 41.0 31.0 41.0 38 37.043426899844015 39.0 35.0 41.0 31.0 41.0 39 36.94606067658353 39.0 35.0 41.0 31.0 41.0 40 36.82087637407554 39.0 35.0 41.0 31.0 41.0 41 36.66619041376558 39.0 35.0 41.0 30.0 41.0 42 36.57413416486108 39.0 35.0 40.0 30.0 41.0 43 35.443949206891624 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 0.0 9 1.0 10 2.0 11 2.0 12 2.0 13 3.0 14 0.0 15 1.0 16 1.0 17 6.0 18 11.0 19 20.0 20 71.0 21 155.0 22 281.0 23 535.0 24 930.0 25 1528.0 26 2434.0 27 3779.0 28 5516.0 29 7603.0 30 10396.0 31 14163.0 32 18602.0 33 24330.0 34 33009.0 35 43725.0 36 61307.0 37 96158.0 38 164180.0 39 190158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.10478251199347 20.571474022368175 12.886225145858587 24.437518319779766 2 19.010297373293405 21.720372773456315 34.451496587918 24.817833265332276 3 18.680504513846437 25.375049159610025 30.391465155226534 25.552981171317008 4 13.265361733717674 17.46046241701784 38.30870320262892 30.96547264663557 5 12.423425161766417 38.909223742139986 36.1321292481636 12.535221847929995 6 29.97815619425816 38.84662348967685 16.860383761641806 14.314836554423186 7 28.136825003571897 31.012901543795873 22.869124229832778 17.981149222799452 8 27.519954751064574 33.284627882005154 19.9248502381019 19.27056712882837 9 26.5965642035554 13.938351271374305 20.714055303272445 38.75102922179785 10 18.591538507992947 26.769193605641977 32.73654425985144 21.902723626513637 11 34.10034599527773 24.063389752117732 21.53036259539174 20.305901657212804 12 20.699325832104652 28.153469305991507 28.14536809684922 23.001836765054623 13 30.337113406617362 20.173336416702632 25.318782579749037 24.17076759693097 14 22.50088745063786 21.700782576803146 26.36560609564435 29.432723876914647 15 25.94021896831838 28.1889673315059 22.479529717444553 23.391283982731167 16 23.382299005318814 26.194007756539516 25.832693828793463 24.590999409348203 17 21.941904019819976 27.835901907613813 26.33128642782338 23.890907644742832 18 21.465258332830075 26.380335566812146 27.67608714544322 24.478318954914563 19 22.837455866822012 26.32127038742928 29.021035157774733 21.820238587973975 20 22.685005840235316 26.388289481242754 28.86269334272092 22.064011335801013 21 22.94203511211337 26.496109210191026 27.61702196606035 22.94483371163525 22 24.002704330906408 26.028448500613482 27.132127775216485 22.836719393263625 23 23.103175526689064 26.51054409193547 27.896440034113457 22.489840347262014 24 21.624778505577314 27.226101801267028 26.921790926940346 24.227328766215305 25 23.561703964142573 26.42364021204547 28.176594575724952 21.83806124808701 26 22.57556586945859 26.87406744035669 27.850484084069933 22.699882606114794 27 21.950447113097297 27.31712993308401 27.498155133736233 23.234267820082454 28 22.132797966154623 27.206658899325536 28.90364127256739 21.75690186195245 29 23.06811938530971 26.902495319710535 27.899975107193725 22.12941018778603 30 22.1516516892494 28.171439260816218 27.625417764625997 22.051491285308384 31 23.351514410578115 26.778178583054334 27.927813807700865 21.94249319866669 32 21.421069919326683 27.34496863359115 27.735152324826085 23.498809122256084 33 21.40634044815889 27.458827445718214 28.18233906948039 22.952493036642505 34 22.539773254520842 26.14716803822592 27.96537395917874 23.34768474807449 35 22.812857649971793 27.647806560801047 28.14507350742586 21.394262281801296 36 22.460970583773133 27.633666268479963 26.672126390646195 23.23323675710071 37 22.53064098239681 26.64443498485074 27.887749646124455 22.937174386627998 38 21.929678558750705 27.5759267415022 28.062293879462846 22.432100820284248 39 21.22281123740814 27.124173860785877 28.689916645922665 22.963098255883317 40 22.07196525023162 26.630441987241333 29.32667168450651 21.970921078020535 41 21.36598169715913 26.190325388747564 29.216347945459713 23.227344968633588 42 20.49488077229563 26.8064591676965 29.327408158064898 23.371251901942962 43 21.279961585539194 25.708377092137262 29.817752253240855 23.193909069082693 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 25.5 2 38.0 3 155.5 4 273.0 5 273.0 6 440.5 7 608.0 8 589.5 9 571.0 10 788.5 11 1006.0 12 1006.0 13 2252.0 14 3498.0 15 6322.5 16 9147.0 17 7687.5 18 6228.0 19 6228.0 20 6772.5 21 7317.0 22 5294.5 23 3272.0 24 3654.5 25 4037.0 26 4037.0 27 5167.5 28 6298.0 29 8759.0 30 11220.0 31 14078.0 32 16936.0 33 16936.0 34 22347.5 35 27759.0 36 31075.0 37 34391.0 38 37306.0 39 40221.0 40 40221.0 41 46429.5 42 52638.0 43 57535.5 44 62433.0 45 65682.0 46 68931.0 47 68931.0 48 71173.0 49 73415.0 50 68283.0 51 63151.0 52 58270.0 53 53389.0 54 53389.0 55 48949.0 56 44509.0 57 37235.5 58 29962.0 59 25790.5 60 21619.0 61 21619.0 62 18517.0 63 15415.0 64 11776.0 65 8137.0 66 6581.5 67 5026.0 68 5026.0 69 3916.0 70 2806.0 71 2151.5 72 1497.0 73 1295.5 74 1094.0 75 1094.0 76 949.0 77 804.0 78 641.5 79 479.0 80 392.5 81 306.0 82 306.0 83 263.5 84 221.0 85 164.5 86 108.0 87 103.0 88 98.0 89 98.0 90 65.0 91 32.0 92 20.0 93 8.0 94 4.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 678911.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.244114001202618 #Duplication Level Percentage of deduplicated Percentage of total 1 67.45979816271318 15.005834408295108 2 11.995817147989454 5.336726483549173 3 4.894891610564447 3.266475810267775 4 2.7902678577219024 2.482681452842296 5 1.784333196297281 1.9845455517283481 6 1.3163343701778563 1.756841507636249 7 1.0235637388226633 1.5937787945707955 8 0.7587179798377679 1.3501607390618766 9 0.7074967504063452 1.4163874534367222 >10 5.805795731820272 27.141208458184153 >50 0.9040759817920493 14.08921835451312 >100 0.5469593311282295 21.30252134099439 >500 0.009292998344411666 1.2732137566255501 >1k 0.001991356788088214 1.242501885887047 >5k 6.637855960294047E-4 0.7579040024073929 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5133 0.7560637550430027 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3906 0.5753331438141376 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3142 0.46279998409217116 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1367 0.2013518708637804 No Hit CCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC 884 0.13020852512332248 No Hit GATTTAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGAT 715 0.10531571884974614 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 693 0.10207523519283088 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.4729471167796663E-4 0.0 3 0.0 0.0 0.0 1.4729471167796663E-4 0.0 4 0.0 0.0 0.0 1.4729471167796663E-4 0.0 5 0.0 0.0 0.0 1.4729471167796663E-4 0.0 6 0.0 0.0 0.0 1.4729471167796663E-4 0.0 7 0.0 0.0 0.0 1.4729471167796663E-4 0.0 8 0.0 0.0 0.0 1.4729471167796663E-4 0.0 9 0.0 0.0 0.0 1.4729471167796663E-4 0.0 10 0.0 0.0 0.0 1.4729471167796663E-4 0.0 11 0.0 0.0 0.0 1.4729471167796663E-4 0.0 12 0.0 0.0 0.0 1.4729471167796663E-4 0.0 13 0.0 0.0 0.0 1.4729471167796663E-4 0.0 14 0.0 0.0 0.0 2.9458942335593326E-4 0.0 15 0.0 1.4729471167796663E-4 0.0 8.837682700677998E-4 0.0 16 0.0 1.4729471167796663E-4 0.0 0.0014729471167796663 0.0 17 0.0 1.4729471167796663E-4 0.0 0.002356715386847466 0.0 18 0.0 1.4729471167796663E-4 0.0 0.0025040100985254327 0.0 19 0.0 1.4729471167796663E-4 0.0 0.003093188945237299 0.0 20 0.0 1.4729471167796663E-4 0.0 0.003535073080271199 0.0 21 0.0 1.4729471167796663E-4 0.0 0.004418841350338999 0.0 22 0.0 1.4729471167796663E-4 0.0 0.0069228514488644316 0.0 23 0.0 1.4729471167796663E-4 0.0 0.008984977412355964 0.0 24 0.0 1.4729471167796663E-4 0.0 0.01266734520430513 0.0 25 0.0 1.4729471167796663E-4 0.0 0.013698408186050896 0.0 26 0.0 1.4729471167796663E-4 0.0 0.015465944726186495 0.0 27 0.0 1.4729471167796663E-4 0.0 0.020179375499881427 0.0 28 0.0 1.4729471167796663E-4 0.0 0.030490005317339093 0.0 29 0.0 1.4729471167796663E-4 0.0 0.05479363274420358 0.0 30 0.0 1.4729471167796663E-4 0.0 0.10708325538988174 0.0 31 0.0 1.4729471167796663E-4 0.0 0.25820762957147547 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCTATA 20 0.0018414049 37.0 2 CTTAAGG 25 0.005494779 29.599998 19 AACCGCG 25 0.005494779 29.599998 35 TCACATT 25 0.005494779 29.599998 26 ATAAGGT 50 2.7180067E-7 29.599998 3 GCGGATC 45 4.00508E-6 28.777777 33 TTGTGCA 40 5.9366008E-5 27.750002 19 ACTGTGC 40 5.9366008E-5 27.750002 8 TGCGGAT 50 9.083933E-6 25.899998 32 CGCCGAA 80 9.767973E-10 25.437502 33 TTAGAGT 60 1.3360604E-6 24.666668 4 GAGGCAC 110 3.6379788E-12 23.545454 7 CGTCTAA 90 3.8216967E-9 22.61111 1 GCCGAAT 90 3.8216967E-9 22.61111 34 TTAGGTT 115 5.456968E-12 22.52174 4 GTGATCG 50 2.700524E-4 22.199999 8 GTTGTGC 50 2.700524E-4 22.199999 18 CTCGCTA 50 2.700524E-4 22.199999 13 GAGCATG 50 2.700524E-4 22.199999 7 GCCGTTT 50 2.700524E-4 22.199999 12 >>END_MODULE