##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630206.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 106457 Sequences flagged as poor quality 0 Sequence length 43 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.70030153019529 31.0 31.0 34.0 30.0 34.0 2 31.794827958706332 31.0 31.0 34.0 30.0 34.0 3 31.77849272476211 33.0 31.0 34.0 30.0 34.0 4 35.544689405111924 37.0 35.0 37.0 33.0 37.0 5 35.52314079863231 37.0 35.0 37.0 33.0 37.0 6 35.65304301267178 37.0 35.0 37.0 33.0 37.0 7 35.61374075917976 37.0 35.0 37.0 33.0 37.0 8 35.69273979165297 37.0 35.0 37.0 33.0 37.0 9 37.30163352339442 39.0 37.0 39.0 34.0 39.0 10 37.19490498511136 39.0 37.0 39.0 34.0 39.0 11 37.3036249377683 39.0 37.0 39.0 34.0 39.0 12 37.23431996017171 39.0 37.0 39.0 34.0 39.0 13 37.304573677635105 39.0 37.0 39.0 34.0 39.0 14 38.28727091689603 40.0 38.0 41.0 34.0 41.0 15 38.266501967930715 40.0 38.0 41.0 33.0 41.0 16 38.08980151610509 40.0 37.0 41.0 33.0 41.0 17 38.290398940417255 40.0 38.0 41.0 34.0 41.0 18 38.40747907605888 40.0 38.0 41.0 34.0 41.0 19 38.469006265440505 40.0 38.0 41.0 34.0 41.0 20 38.50508656077101 40.0 38.0 41.0 34.0 41.0 21 38.500333467972986 40.0 38.0 41.0 34.0 41.0 22 38.433142019782636 40.0 38.0 41.0 34.0 41.0 23 38.359797852654125 40.0 38.0 41.0 34.0 41.0 24 38.29859943451346 40.0 38.0 41.0 34.0 41.0 25 38.26347727251378 40.0 37.0 41.0 34.0 41.0 26 37.97145326281973 40.0 37.0 41.0 33.0 41.0 27 37.77684886855726 40.0 36.0 41.0 33.0 41.0 28 37.57345219196483 39.0 36.0 41.0 33.0 41.0 29 37.36838347877547 39.0 35.0 41.0 33.0 41.0 30 37.125102153921304 39.0 35.0 41.0 33.0 41.0 31 36.76736146988925 38.0 35.0 40.0 32.0 41.0 32 36.49196389152428 38.0 35.0 40.0 31.0 41.0 33 36.257972702593534 38.0 35.0 40.0 31.0 41.0 34 36.03535699860037 38.0 35.0 40.0 30.0 41.0 35 35.84838009712842 38.0 35.0 40.0 30.0 41.0 36 35.60222437228177 38.0 35.0 40.0 30.0 41.0 37 35.331147787369545 38.0 35.0 40.0 27.0 41.0 38 34.99036230590755 38.0 35.0 40.0 25.0 41.0 39 34.6383798153245 37.0 34.0 40.0 24.0 41.0 40 34.23857519937627 37.0 33.0 40.0 21.0 41.0 41 33.77217092347145 37.0 33.0 40.0 18.0 41.0 42 33.339573724602424 37.0 33.0 40.0 15.0 41.0 43 32.242332584987366 35.0 31.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 0.0 15 1.0 16 0.0 17 2.0 18 7.0 19 11.0 20 19.0 21 44.0 22 87.0 23 200.0 24 303.0 25 495.0 26 784.0 27 1135.0 28 1385.0 29 1988.0 30 2392.0 31 3013.0 32 3807.0 33 4950.0 34 6242.0 35 7996.0 36 11250.0 37 17947.0 38 21256.0 39 21142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.847487718045784 19.69433668053768 14.464055909897894 17.99411969151864 2 18.6554195590708 27.259832608471022 32.02325821693266 22.061489615525517 3 21.759020073832627 27.97937195299511 32.84612566576176 17.415482307410503 4 14.728951595479863 18.617845702959883 32.29660802013959 34.35659468142067 5 12.32986088279775 41.21288407526043 31.570493250796094 14.88676179114572 6 28.90274946692092 33.753534290840435 17.753647012408766 19.590069229829883 7 22.939778502118227 36.57908827038147 22.311355758663122 18.169777468837182 8 30.616117305578776 32.05143860901585 19.82772386973144 17.504720215673935 9 27.993462149036702 12.426613562283363 22.558403862592407 37.02152042608753 10 20.891063997670418 30.561635214217947 27.064448556694252 21.48285223141738 11 28.77687704894934 26.94703025634763 18.74841485294532 25.527677841757708 12 19.030218773777204 34.14148435518566 28.104305024563907 18.723991846473222 13 31.95562527593301 20.55102059986661 27.319011431845723 20.17434269235466 14 22.82236020177161 25.02324882346863 29.675831556403054 22.47855941835671 15 28.02164254111989 26.784523328667913 26.269761499948334 18.924072630263865 16 18.8151084475422 27.361282019970506 31.10363808861794 22.719971443869355 17 18.020421390796283 31.09424462459021 29.8721549545826 21.013179030030905 18 16.706275773316925 25.65918633814592 33.684022657035236 23.95051523150192 19 17.772433940464225 29.09813351869769 36.61948016570071 16.50995237513738 20 19.361808053956057 26.11195130428248 37.31929323576655 17.20694740599491 21 21.478155499403513 26.405027381947644 34.80090552993227 17.31591158871657 22 21.687629747221884 27.032510778999974 33.85780174154823 17.422057732229916 23 19.899114196342186 27.891073391134448 33.83995415989555 18.36985825262782 24 17.739556816367173 29.99333064054031 34.55949350441963 17.70761903867289 25 18.049541129282247 29.29539626328001 34.45428670730906 18.20077590012869 26 19.364626093164375 28.36826136374311 34.12175808072743 18.145354462365088 27 18.15568727279559 29.335788158599247 34.194087753740945 18.31443681486422 28 17.535718646965442 30.423551293010327 35.16725062701372 16.87347943301051 29 17.942455639366127 29.788553124735813 35.125919385291716 17.143071850606347 30 16.758879171872213 31.926505537447042 35.269639384915976 16.04497590576477 31 17.71043707788121 30.789896390091776 34.49749664183661 17.002169890190405 32 16.14360727805593 31.857933250044617 34.475891674572836 17.522567797326623 33 16.24975342156927 32.053317301821394 35.25554918887438 16.441380087734956 34 15.817654076293714 32.480719915083085 33.89443625125638 17.807189757366825 35 15.966070807931839 32.4074508956668 34.06070056454718 17.565777731854176 36 15.539607541072922 32.84518631935899 33.000178475816526 18.61502766375156 37 15.764111331335656 33.06029664559399 33.269770893412364 17.905821129657983 38 16.02618897770931 32.198915994251195 33.279164357440095 18.495730670599396 39 16.149243356472567 31.481255342532666 34.98219938566745 17.387301915327317 40 15.750960481696834 31.758362531350688 34.592370628516676 17.8983063584358 41 15.140385319894417 31.816602008322608 34.93805010473712 18.10496256704585 42 14.610593948730473 32.37833115718083 34.4458325896841 18.565242304404595 43 14.870792902298579 32.388663967611336 34.210056642588086 18.530486487501996 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9.0 1 35.0 2 61.0 3 243.5 4 426.0 5 426.0 6 603.5 7 781.0 8 782.0 9 783.0 10 1020.0 11 1257.0 12 1257.0 13 2504.5 14 3752.0 15 5589.0 16 7426.0 17 5977.5 18 4529.0 19 4529.0 20 5210.0 21 5891.0 22 3919.0 23 1947.0 24 2012.0 25 2077.0 26 2077.0 27 2149.0 28 2221.0 29 2221.0 30 2221.0 31 2388.5 32 2556.0 33 2556.0 34 2806.5 35 3057.0 36 3227.0 37 3397.0 38 3772.0 39 4147.0 40 4147.0 41 4701.5 42 5256.0 43 5836.5 44 6417.0 45 7146.5 46 7876.0 47 7876.0 48 9094.5 49 10313.0 50 8786.5 51 7260.0 52 6402.0 53 5544.0 54 5544.0 55 5075.0 56 4606.0 57 4396.5 58 4187.0 59 3630.0 60 3073.0 61 3073.0 62 2576.5 63 2080.0 64 1674.5 65 1269.0 66 1084.5 67 900.0 68 900.0 69 690.0 70 480.0 71 386.0 72 292.0 73 244.0 74 196.0 75 196.0 76 145.5 77 95.0 78 67.0 79 39.0 80 28.0 81 17.0 82 17.0 83 14.0 84 11.0 85 8.5 86 6.0 87 3.5 88 1.0 89 1.0 90 1.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 106457.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.94999859098039 #Duplication Level Percentage of deduplicated Percentage of total 1 73.46195586639335 28.61343077486685 2 11.402387555769925 8.88245958462102 3 4.886048474617147 5.709347436053994 4 2.549137827083082 3.971556590924035 5 1.6905824189075123 3.2924091417191916 6 1.0731942602194622 2.5080548954037782 7 0.750030145906186 2.0449571188367135 8 0.5763897262751718 1.7960303221018814 9 0.39310261666465696 1.3780211728679186 >10 2.9663571686964914 21.485670270625697 >50 0.16399372965151332 4.348234498435988 >100 0.07235017484625587 5.553415933193683 >500 0.004823344989750392 1.2493307156880245 >1k 0.009646689979500784 9.167081544661224 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3250 3.052875809012089 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3183 2.9899396000263017 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1956 1.8373615638238912 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1370 1.2869045717989422 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 761 0.7148426125102154 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 569 0.5344881031778089 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 464 0.43585673088664906 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 453 0.4255239204561466 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 437 0.4104943780117794 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 378 0.3550729402481753 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 300 0.28180392083188516 No Hit GTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAAAAAAAAA 282 0.2648956855819721 No Hit GAAGCAGAGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAA 269 0.2526841823459237 No Hit GAGTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAA 234 0.21980705824887042 No Hit ACGCAGAGTACATGGGAATGGTATCAACGCAAAAAAAAAAAAA 219 0.20571686220727617 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 211 0.19820209098509256 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 201 0.18880862695736308 No Hit GTACATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAA 187 0.17565777731854176 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 165 0.15499215645753686 No Hit GAATGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 151 0.14184130681871554 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 148 0.13902326761039668 No Hit GTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 142 0.133387189193759 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 137 0.12869045717989425 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT 134 0.12587241797157536 No Hit GTACATGGGAAGCATGGTATCAACGCAAAAAAAAAAAAAAAAA 133 0.12493307156880243 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 129 0.12117568595771064 No Hit GAAGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 122 0.11460026113829996 No Hit ACGCAGAGTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAA 122 0.11460026113829996 No Hit GAGTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAAAAAAA 121 0.11366091473552702 No Hit GAGTACATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAA 118 0.11084287552720817 No Hit GGTATCAACGCAGAGTACATGGGAATGGTATCAACGCAAAAAA 114 0.10708548991611637 No Hit GGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 110 0.10332810430502457 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGAGGTATCAACGCAA 109 0.10238875790225162 No Hit CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTT 109 0.10238875790225162 No Hit GAAGCATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 108 0.10144941149947866 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0037573856110918024 0.0 17 0.0 0.0 0.0 0.009393464027729505 0.0 18 0.0 0.0 0.0 0.011272156833275407 0.0 19 0.0 0.0 0.0 0.01502954244436721 0.0 20 0.0 0.0 0.0 0.01690823524991311 0.0 21 0.0 0.0 0.0 0.022544313666550814 0.0 22 0.0 0.0 0.0 0.038513202513690975 0.0 23 0.0 0.0 0.0 0.05542143776360409 0.0 24 0.0 0.0 0.0 0.09581333308284096 0.0 25 0.0 0.0 0.0 0.09957071869393276 0.0 26 0.0 0.0 0.0 0.11084287552720817 0.0 27 0.0 0.0 0.0 0.1352658819993049 0.0 28 0.0 0.0 0.0 0.16250692767972044 0.0 29 0.0 0.0 0.0 0.22544313666550814 0.0 30 0.0 0.0 0.0 0.41331241722009826 0.0 31 0.0 0.0 0.0 0.778718167898776 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGT 20 0.0018344444 37.0 37 CTCCGAG 20 0.0018344444 37.0 12 TCCGAGC 20 0.0018344444 37.0 13 AGCCCAC 20 0.0018344444 37.0 17 CACGAGA 20 0.0018344444 37.0 21 GCGCAGA 20 0.0018344444 37.0 31 CCCACGA 20 0.0018344444 37.0 19 ACATGCG 20 0.0018344444 37.0 27 TCTCCGA 20 0.0018344444 37.0 11 ATGCGCA 20 0.0018344444 37.0 29 GCTGTGG 20 0.0018344444 37.0 26 ACGAGAC 20 0.0018344444 37.0 22 AGCTGTA 30 3.5777723E-4 30.833332 7 AGCCGTC 25 0.0054742447 29.599998 12 AGTCCTA 25 0.0054742447 29.599998 29 TCCATGA 25 0.0054742447 29.599998 2 ATCTCCG 25 0.0054742447 29.599998 10 GCCCACG 25 0.0054742447 29.599998 18 CGAGTCC 25 0.0054742447 29.599998 27 CGACGAG 25 0.0054742447 29.599998 24 >>END_MODULE