##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630199.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2338377 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47213644335366 31.0 31.0 34.0 30.0 34.0 2 31.69198978607812 31.0 31.0 34.0 30.0 34.0 3 31.82103313537552 31.0 31.0 34.0 30.0 34.0 4 35.55508072479331 37.0 35.0 37.0 33.0 37.0 5 35.41003054682799 37.0 35.0 37.0 33.0 37.0 6 35.465541698366 37.0 35.0 37.0 33.0 37.0 7 35.45588842175577 37.0 35.0 37.0 33.0 37.0 8 35.43138296348279 37.0 35.0 37.0 33.0 37.0 9 37.094103303274025 39.0 37.0 39.0 33.0 39.0 10 36.9514783116666 39.0 37.0 39.0 33.0 39.0 11 37.05267970049312 39.0 37.0 39.0 33.0 39.0 12 36.91648523741039 39.0 37.0 39.0 33.0 39.0 13 36.961640488253174 39.0 37.0 39.0 33.0 39.0 14 38.09285628450844 40.0 37.0 41.0 33.0 41.0 15 38.06562158283288 40.0 37.0 41.0 33.0 41.0 16 38.043512230919134 40.0 37.0 41.0 33.0 41.0 17 37.99316748325869 40.0 37.0 41.0 33.0 41.0 18 37.921685853051066 40.0 37.0 41.0 33.0 41.0 19 37.92688433045655 40.0 37.0 41.0 33.0 41.0 20 37.87505949639429 40.0 37.0 41.0 33.0 41.0 21 37.82448724050912 40.0 37.0 41.0 33.0 41.0 22 37.78475369882615 39.0 37.0 41.0 33.0 41.0 23 37.72908645611892 39.0 37.0 41.0 33.0 41.0 24 37.70042640686254 39.0 37.0 41.0 32.0 41.0 25 37.672285093464396 39.0 37.0 41.0 32.0 41.0 26 37.473937692681716 39.0 37.0 41.0 32.0 41.0 27 37.373384616766245 39.0 36.0 40.0 32.0 41.0 28 37.27078524976939 39.0 36.0 40.0 31.0 41.0 29 37.18974185941788 39.0 36.0 40.0 31.0 41.0 30 37.13094894450296 39.0 36.0 40.0 31.0 41.0 31 37.03653730771386 39.0 36.0 40.0 31.0 41.0 32 36.932049023745954 39.0 36.0 40.0 31.0 41.0 33 36.85837912364003 39.0 36.0 40.0 30.0 41.0 34 36.746171810619074 39.0 35.0 40.0 30.0 41.0 35 36.632661029423396 39.0 35.0 40.0 30.0 41.0 36 36.53261642583724 39.0 35.0 40.0 30.0 41.0 37 36.448284002109155 38.0 35.0 40.0 30.0 41.0 38 36.335993725562645 38.0 35.0 40.0 30.0 41.0 39 36.242652916959074 38.0 35.0 40.0 30.0 41.0 40 36.109627746082005 38.0 35.0 40.0 29.0 41.0 41 35.98280901668123 38.0 35.0 40.0 29.0 41.0 42 35.918809926714125 38.0 35.0 40.0 29.0 41.0 43 34.75024386572396 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 3.0 12 4.0 13 3.0 14 6.0 15 15.0 16 45.0 17 97.0 18 184.0 19 359.0 20 677.0 21 1261.0 22 2145.0 23 3684.0 24 5825.0 25 8712.0 26 12913.0 27 18393.0 28 25458.0 29 34307.0 30 45977.0 31 59873.0 32 77462.0 33 100722.0 34 132799.0 35 177487.0 36 248627.0 37 376035.0 38 616342.0 39 388958.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.02940757628047 19.07237370193087 12.346640426244356 26.551578295544303 2 19.657865262958026 20.38884234663615 33.73861443214674 26.21467795825908 3 20.71364027271907 22.35482131409948 29.153981586373796 27.777556826807654 4 15.683057094728522 15.439341047230624 33.51692220715479 35.36067965088606 5 15.63858180267767 35.70480722312955 33.19871004547171 15.457900928721074 6 35.91478191925425 33.9999923023533 15.094828592652082 14.990397185740367 7 30.238964888895158 29.58428003696581 20.744259800707926 19.4324952734311 8 27.734578299393124 32.990531466910596 19.270074928037694 20.004815305658582 9 27.095417034977682 13.757105890110962 19.209904989657357 39.937572085254004 10 17.99649928133915 25.86541862154819 32.13335574203817 24.00472635507448 11 36.88040893320453 21.06807413860126 20.71034739051915 21.34116953767506 12 22.520021365246066 24.443406687629924 28.362663505499754 24.673908441624253 13 30.475068819099743 18.887330828176978 24.412829924344962 26.224770428378314 14 22.959172109544355 20.308145350386187 24.571059328756657 32.16162321131281 15 26.12765178583265 26.836091870558082 21.35883136038372 25.677424983225546 16 25.544212930592458 25.571111929342443 22.96802440325063 25.916650736814468 17 24.264137048901866 25.921354854242924 24.937766664656724 24.876741432198486 18 24.460170451556785 24.109286056097883 25.850408210481028 25.5801352818643 19 24.98249854493095 24.57371074039815 25.512609814414017 24.931180900256887 20 24.996183250177367 24.624900090960526 25.33141576401068 25.047500894851428 21 26.457324888159604 24.3329882221729 24.697257969950954 24.512428919716537 22 25.881883032547787 24.65175632500662 24.898423137073276 24.567937505372317 23 25.14834006663596 24.631742443583736 24.891281431522806 25.3286360582575 24 25.322820058527775 24.799294553444547 24.968086839718318 24.90979854830936 25 25.450515464358396 24.35992998562678 25.255337355781382 24.934217194233437 26 25.48802010967436 24.974244957079208 25.186058535471396 24.351676397775037 27 25.80105774218614 24.568664505338532 24.56049644689458 25.06978130558075 28 24.75742790833129 24.23073781515983 25.778734566752924 25.233099709755958 29 24.57610556381627 24.518415978261846 25.961254322977005 24.94422413494488 30 24.513412507906125 24.960945134167844 25.68067510072157 24.844967257204463 31 24.95051054641745 24.800748553376977 25.198588593712646 25.050152306492922 32 24.338718692494837 24.697685616989904 25.40159264310246 25.5620030474128 33 24.816143846779198 24.61946897356585 25.46813452236316 25.09625265729179 34 25.357502233386658 24.649532560404076 25.198246476081486 24.794718730127776 35 25.448206170348065 24.568407917115163 25.773004096430984 24.210381816105787 36 24.95743842844845 25.029539719215503 24.68224755888379 25.33077429345225 37 24.57315479924751 24.307970870394293 25.730581510167095 25.3882928201911 38 24.978222074541446 24.254728814044952 25.991574498038595 24.775474613375003 39 24.15158034825009 24.198535993126857 26.205398017513858 25.4444856411092 40 24.467568745330627 23.849490479935444 27.04414215500751 24.63879861972642 41 23.565361787256716 23.84491465661867 27.398148373850752 25.191575182273855 42 23.869889243693382 24.280900812828726 26.740341698537062 25.10886824494083 43 23.724489250450205 22.98495922599307 27.508224721676616 25.782326801880107 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 363.0 1 303.0 2 243.0 3 493.5 4 744.0 5 744.0 6 1031.5 7 1319.0 8 1282.0 9 1245.0 10 1782.5 11 2320.0 12 2320.0 13 4245.5 14 6171.0 15 8924.5 16 11678.0 17 11367.0 18 11056.0 19 11056.0 20 14532.5 21 18009.0 22 18170.0 23 18331.0 24 21754.0 25 25177.0 26 25177.0 27 29421.5 28 33666.0 29 39807.5 30 45949.0 31 53287.5 32 60626.0 33 60626.0 34 70594.5 35 80563.0 36 90255.0 37 99947.0 38 106851.5 39 113756.0 40 113756.0 41 120884.0 42 128012.0 43 132716.0 44 137420.0 45 141240.5 46 145061.0 47 145061.0 48 148289.5 49 151518.0 50 156045.5 51 160573.0 52 166283.0 53 171993.0 54 171993.0 55 171440.0 56 170887.0 57 163639.0 58 156391.0 59 143655.0 60 130919.0 61 130919.0 62 124387.5 63 117856.0 64 103364.0 65 88872.0 66 75702.5 67 62533.0 68 62533.0 69 54756.5 70 46980.0 71 42429.5 72 37879.0 73 38420.5 74 38962.0 75 38962.0 76 35687.0 77 32412.0 78 25079.0 79 17746.0 80 11645.5 81 5545.0 82 5545.0 83 3866.0 84 2187.0 85 1836.5 86 1486.0 87 1256.0 88 1026.0 89 1026.0 90 901.0 91 776.0 92 448.0 93 120.0 94 84.5 95 49.0 96 49.0 97 28.5 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2338377.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.16772116747138 #Duplication Level Percentage of deduplicated Percentage of total 1 81.56155874358713 41.73319095776204 2 10.847048132374217 11.100374686549303 3 3.1344174068160013 4.811429876832896 4 1.3205913375758196 2.7028659734903044 5 0.717356757714897 1.835275527817859 6 0.42660899082928166 1.3097165934173423 7 0.30572240467575523 1.0950183129968527 8 0.21364826930485953 0.8745516057363111 9 0.15693922151832915 0.7227200094200901 >10 1.0687235373869834 10.555958329839516 >50 0.12636830397699406 4.510046018224102 >100 0.10565324412800098 10.864683131677614 >500 0.011333840246437297 4.010472890322212 >1k 0.0038619011210082547 3.392614605834322 >5k 1.6790874439166325E-4 0.48108148007924645 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 5927 0.2534663999859732 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5272 0.22545551893471413 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4649 0.1988131084080967 No Hit GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT 4112 0.1758484624164538 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3424 0.14642634613665803 No Hit AGGTAGAGAGCTTCCACCAGGTGTGAGCCGCACAGGTGTTGGT 2767 0.11832993567760888 No Hit CTTCTACACACCCAAGACCCGCCGGGAGGCAGAGGACCTGCAG 2623 0.11217181831672139 No Hit GGTCTTGGGTGTGTAGAAGAAGCCTCGTTCCCCGCACACTAGG 2359 0.10088193648842766 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 4.276470389505199E-5 0.0 0.0 0.0 3 0.0 4.276470389505199E-5 0.0 0.0 4.276470389505199E-5 4 0.0 4.276470389505199E-5 0.0 0.0 4.276470389505199E-5 5 0.0 4.276470389505199E-5 0.0 0.0 4.276470389505199E-5 6 0.0 4.276470389505199E-5 0.0 0.0 4.276470389505199E-5 7 0.0 4.276470389505199E-5 0.0 0.0 4.276470389505199E-5 8 0.0 4.276470389505199E-5 0.0 0.0 4.276470389505199E-5 9 0.0 4.276470389505199E-5 0.0 8.552940779010399E-5 4.276470389505199E-5 10 0.0 4.276470389505199E-5 0.0 1.2829411168515598E-4 4.276470389505199E-5 11 0.0 4.276470389505199E-5 0.0 1.2829411168515598E-4 4.276470389505199E-5 12 0.0 4.276470389505199E-5 0.0 1.2829411168515598E-4 4.276470389505199E-5 13 0.0 4.276470389505199E-5 0.0 1.2829411168515598E-4 4.276470389505199E-5 14 0.0 4.276470389505199E-5 0.0 2.1382351947525998E-4 4.276470389505199E-5 15 4.276470389505199E-5 4.276470389505199E-5 0.0 2.9935292726536396E-4 4.276470389505199E-5 16 4.276470389505199E-5 8.552940779010399E-5 0.0 4.2764703895051997E-4 4.276470389505199E-5 17 4.276470389505199E-5 8.552940779010399E-5 0.0 6.842352623208319E-4 4.276470389505199E-5 18 4.276470389505199E-5 8.552940779010399E-5 0.0 7.269999662158839E-4 4.276470389505199E-5 19 4.276470389505199E-5 8.552940779010399E-5 0.0 8.552940779010399E-4 4.276470389505199E-5 20 4.276470389505199E-5 8.552940779010399E-5 0.0 0.001154647005166404 1.2829411168515598E-4 21 4.276470389505199E-5 8.552940779010399E-5 0.0 0.0012829411168515598 2.1382351947525998E-4 22 4.276470389505199E-5 8.552940779010399E-5 0.0 0.0022237646025427037 2.1382351947525998E-4 23 4.276470389505199E-5 8.552940779010399E-5 0.0 0.0030362939765486915 2.1382351947525998E-4 24 4.276470389505199E-5 8.552940779010399E-5 0.0 0.004832411540140876 2.1382351947525998E-4 25 4.276470389505199E-5 8.552940779010399E-5 0.0 0.005987058545307279 2.5658822337031197E-4 26 4.276470389505199E-5 8.552940779010399E-5 0.0 0.009622058376386699 2.9935292726536396E-4 27 4.276470389505199E-5 8.552940779010399E-5 0.0 0.023263998918908284 2.9935292726536396E-4 28 4.276470389505199E-5 8.552940779010399E-5 0.0 0.05007746826110589 3.84882335055468E-4 29 4.276470389505199E-5 8.552940779010399E-5 0.0 0.08869399587833784 3.84882335055468E-4 30 4.276470389505199E-5 8.552940779010399E-5 0.0 0.1445874638691708 3.84882335055468E-4 31 4.276470389505199E-5 8.552940779010399E-5 0.0 0.29109933941361893 3.84882335055468E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1975 0.0 18.453163 1 CGCAAGA 530 0.0 17.103773 2 TTAGACT 285 0.0 16.877193 4 CAGGACA 1940 0.0 16.688145 4 AATCGTC 100 5.883023E-6 16.650002 28 CTAATCG 100 5.883023E-6 16.650002 26 GACAGGC 1740 0.0 16.586208 7 AAGACGG 525 0.0 16.561905 5 ACGGACC 520 0.0 16.365385 8 GACGGAC 520 0.0 16.365385 7 CGGACCA 540 0.0 16.10185 9 CCAGGAC 2000 0.0 15.8175 3 TGCATCA 1840 0.0 15.785326 14 TCTAGCG 300 0.0 15.416667 28 AATGCGT 145 5.35274E-8 15.310346 35 ATTAGAC 255 0.0 15.235294 3 ACAGGCT 2030 0.0 15.128079 8 TGCGTTA 135 3.9769657E-7 15.074073 37 TCCAGGA 2205 0.0 14.766439 2 ATGCGTT 140 6.001992E-7 14.535715 36 >>END_MODULE