##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630188.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2414810 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.861309585433222 33.0 31.0 34.0 30.0 34.0 2 32.078434742277864 33.0 31.0 34.0 30.0 34.0 3 32.21054865600192 34.0 31.0 34.0 30.0 34.0 4 35.83912150438337 37.0 35.0 37.0 35.0 37.0 5 35.76254984864234 37.0 35.0 37.0 35.0 37.0 6 35.81691106132573 37.0 35.0 37.0 35.0 37.0 7 35.79168506010825 37.0 35.0 37.0 35.0 37.0 8 35.794259175670135 37.0 35.0 37.0 35.0 37.0 9 37.543791437007464 39.0 37.0 39.0 35.0 39.0 10 37.432605877895156 39.0 37.0 39.0 34.0 39.0 11 37.498825166369194 39.0 37.0 39.0 35.0 39.0 12 37.41925658747479 39.0 37.0 39.0 34.0 39.0 13 37.43735242110145 39.0 37.0 39.0 34.0 39.0 14 38.68516322195121 40.0 38.0 41.0 35.0 41.0 15 38.695184300214095 40.0 38.0 41.0 35.0 41.0 16 38.64837647682426 40.0 38.0 41.0 34.0 41.0 17 38.61409966001466 40.0 38.0 41.0 34.0 41.0 18 38.57581880147921 40.0 38.0 41.0 34.0 41.0 19 38.605585946720446 40.0 38.0 41.0 34.0 41.0 20 38.57911388473627 40.0 38.0 41.0 34.0 41.0 21 38.53047113437496 40.0 38.0 41.0 34.0 41.0 22 38.494001598469445 40.0 38.0 41.0 34.0 41.0 23 38.44126867124122 40.0 38.0 41.0 34.0 41.0 24 38.40910340772152 40.0 38.0 41.0 34.0 41.0 25 38.389790087004776 40.0 38.0 41.0 34.0 41.0 26 38.22960895474178 40.0 38.0 41.0 34.0 41.0 27 38.114497206819586 40.0 38.0 41.0 33.0 41.0 28 38.05240826400421 40.0 38.0 41.0 33.0 41.0 29 37.99805367710089 40.0 38.0 41.0 33.0 41.0 30 37.93775907835399 40.0 37.0 41.0 33.0 41.0 31 37.885852717191 40.0 37.0 41.0 33.0 41.0 32 37.807072192015106 40.0 37.0 41.0 33.0 41.0 33 37.721827390146636 40.0 37.0 41.0 33.0 41.0 34 37.67032313101238 40.0 37.0 41.0 32.0 41.0 35 37.545735275239046 40.0 37.0 41.0 32.0 41.0 36 37.46554014601563 40.0 37.0 41.0 32.0 41.0 37 37.4042988889395 40.0 37.0 41.0 31.0 41.0 38 37.31362467440503 40.0 36.0 41.0 31.0 41.0 39 37.23648320157694 40.0 36.0 41.0 31.0 41.0 40 37.13862042976466 39.0 36.0 41.0 31.0 41.0 41 37.029033754208406 39.0 36.0 41.0 31.0 41.0 42 36.98936272418948 39.0 36.0 41.0 31.0 41.0 43 35.79496689180515 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 8.0 10 6.0 11 3.0 12 1.0 13 3.0 14 5.0 15 7.0 16 25.0 17 28.0 18 80.0 19 149.0 20 356.0 21 683.0 22 1290.0 23 2145.0 24 3720.0 25 6071.0 26 8978.0 27 13447.0 28 19191.0 29 26710.0 30 35653.0 31 47246.0 32 61391.0 33 79942.0 34 105454.0 35 141464.0 36 197595.0 37 301609.0 38 567608.0 39 793940.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.34213043676314 19.380075451070685 12.12799350673552 26.149800605430656 2 18.911301510263748 20.630070274679994 34.49426662967273 25.96436158538353 3 19.709004021020288 23.183687329437927 29.447699819033378 27.659608830508404 4 14.595392598175424 15.735979228179442 34.82095899884463 34.8476691748005 5 14.789527954580278 36.13199382146007 34.36821116361122 14.710267060348434 6 34.62052915136181 35.2257113396085 15.681233720251283 14.472525788778412 7 29.37655550540208 30.03727001296168 21.739143038168635 18.847031443467603 8 27.026142843536345 33.63978946583789 19.83381715331641 19.500250537309356 9 26.48448532182656 14.153411655575388 19.88471142657186 39.47739159602619 10 16.962742410375974 26.36571821385533 33.54450246603252 23.12703690973617 11 36.08022991456885 21.785647732119713 21.527780653550384 20.606341699761057 12 21.321056314989583 25.41963964038579 29.665605161482684 23.593698883141943 13 30.059756254115232 19.96956282274796 24.723063098131945 25.247617825004866 14 22.66016788070283 20.637731332899897 25.091208003942338 31.610892782454936 15 25.222522682944 27.898219735714196 21.95555758009947 24.92370000124233 16 25.034474761989557 26.181066005192953 24.125956079360282 24.658503153457207 17 23.625378394159373 26.36580103610636 25.560561700506458 24.448258869227807 18 23.93401551260762 25.48693271934438 26.301738024937784 24.277313743110223 19 24.332514773419025 25.36203676479723 26.381288797048214 23.924159664735527 20 24.332266306665947 25.38435736144873 26.18777460752606 24.095601724359266 21 24.673493980892907 25.347874159871793 25.889241803702983 24.08939005553232 22 24.702564591003018 25.244263523838313 25.966804841788793 24.086367043369872 23 24.3062601198438 25.24393223483421 26.130254554188525 24.319553091133464 24 24.22099461241257 25.7859210455481 25.718793611091556 24.274290730947776 25 24.742526327123045 25.163967351468646 25.98622665965438 24.10727966175393 26 24.420844704138215 25.75527681266849 25.770557517982784 24.053320965210514 27 24.344192710813687 25.416906506101927 25.74554519817294 24.49335558491144 28 24.290979414529506 25.380671771278074 26.179658026925512 24.148690787266908 29 24.00482853723481 25.574020316298178 26.406508172485623 24.01464297398139 30 23.897739366658246 25.9444842451373 26.057453795536713 24.100322592667748 31 24.433806386423775 25.531366857019805 25.905350731527534 24.129476025028886 32 23.85111043933063 25.563419068166855 26.07861488067384 24.506855611828673 33 23.71449513626331 25.423408052807467 26.391434522798896 24.470662288130328 34 24.446395368579722 25.00515568512637 26.123504540729915 24.424944405564 35 24.270108207270965 25.281367892297947 26.573850530683572 23.87467336974752 36 24.074730517100722 25.472273180912786 25.947921368554876 24.50507493343162 37 24.157677001503224 24.82572127827862 26.53902377412716 24.477577946090996 38 23.776280535528674 25.120816958684124 26.716304802448228 24.386597703338982 39 23.645131501029066 24.934798182879813 27.01794344068477 24.402126875406346 40 23.654531826520515 24.783440519129872 27.390063814544412 24.1719638398052 41 23.188118319867815 24.80207552561071 27.547219035866178 24.4625871186553 42 23.26986388163044 25.002132672963917 27.513096268443483 24.214907176962164 43 23.212840761799065 24.35835531573913 27.60589860071807 24.82290532174374 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 239.0 1 260.5 2 282.0 3 609.5 4 937.0 5 937.0 6 1254.0 7 1571.0 8 1408.5 9 1246.0 10 1780.5 11 2315.0 12 2315.0 13 4140.0 14 5965.0 15 8252.0 16 10539.0 17 10843.5 18 11148.0 19 11148.0 20 14494.5 21 17841.0 22 18524.5 23 19208.0 24 23479.0 25 27750.0 26 27750.0 27 32690.0 28 37630.0 29 45090.0 30 52550.0 31 61286.0 32 70022.0 33 70022.0 34 81231.0 35 92440.0 36 102682.5 37 112925.0 38 122942.5 39 132960.0 40 132960.0 41 143062.5 42 153165.0 43 158344.0 44 163523.0 45 167289.5 46 171056.0 47 171056.0 48 173060.0 49 175064.0 50 175772.5 51 176481.0 52 174041.5 53 171602.0 54 171602.0 55 165741.5 56 159881.0 57 152109.0 58 144337.0 59 137441.0 60 130545.0 61 130545.0 62 119808.0 63 109071.0 64 96686.5 65 84302.0 66 73085.0 67 61868.0 68 61868.0 69 53068.0 70 44268.0 71 36861.0 72 29454.0 73 23602.5 74 17751.0 75 17751.0 76 14107.5 77 10464.0 78 8286.0 79 6108.0 80 4889.0 81 3670.0 82 3670.0 83 2774.0 84 1878.0 85 1555.0 86 1232.0 87 1040.0 88 848.0 89 848.0 90 693.0 91 538.0 92 308.0 93 78.0 94 59.5 95 41.0 96 41.0 97 26.5 98 12.0 99 8.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2414810.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.89657129743498 #Duplication Level Percentage of deduplicated Percentage of total 1 81.49571560427714 47.183225089185164 2 10.740632638074082 12.436916066196266 3 3.1542269584336875 5.478567779617425 4 1.4186722467278585 3.2854503552148695 5 0.7477383725497907 2.1645743999078477 6 0.48950687628739203 1.700446185813461 7 0.3101628433086799 1.2570155620005297 8 0.2307292325317729 1.0686745169342597 9 0.18038271145200557 0.9399186462965115 >10 1.0480097348135007 11.577623426880768 >50 0.11447376728805732 4.640130663335171 >100 0.0671714543250218 6.839971447581999 >500 0.0022195654962292874 0.8027431670044464 >1k 3.579944348753524E-4 0.6247426940312176 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4812 0.1992703359684613 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4052 0.16779788057859624 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3150 0.130445045365888 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.141112551298032E-5 8.282225102596064E-5 2 0.0 0.0 0.0 4.141112551298032E-5 8.282225102596064E-5 3 0.0 0.0 0.0 4.141112551298032E-5 8.282225102596064E-5 4 0.0 0.0 0.0 4.141112551298032E-5 8.282225102596064E-5 5 0.0 0.0 0.0 4.141112551298032E-5 1.2423337653894097E-4 6 0.0 0.0 0.0 4.141112551298032E-5 1.6564450205192128E-4 7 0.0 0.0 0.0 4.141112551298032E-5 1.6564450205192128E-4 8 0.0 0.0 0.0 4.141112551298032E-5 1.6564450205192128E-4 9 0.0 0.0 0.0 4.141112551298032E-5 1.6564450205192128E-4 10 0.0 0.0 0.0 4.141112551298032E-5 2.070556275649016E-4 11 0.0 0.0 0.0 4.141112551298032E-5 2.070556275649016E-4 12 0.0 0.0 0.0 4.141112551298032E-5 2.070556275649016E-4 13 0.0 0.0 0.0 4.141112551298032E-5 2.070556275649016E-4 14 0.0 0.0 0.0 4.141112551298032E-5 2.070556275649016E-4 15 0.0 0.0 0.0 2.070556275649016E-4 2.070556275649016E-4 16 0.0 0.0 0.0 2.4846675307788193E-4 3.3128900410384256E-4 17 0.0 0.0 0.0 3.3128900410384256E-4 3.3128900410384256E-4 18 0.0 0.0 0.0 3.7270012961682287E-4 4.555223806427835E-4 19 0.0 0.0 0.0 4.969335061557639E-4 4.555223806427835E-4 20 0.0 0.0 0.0 5.383446316687442E-4 4.969335061557639E-4 21 0.0 0.0 0.0 7.039891337206654E-4 9.524558867985473E-4 22 0.0 0.0 0.0 9.524558867985473E-4 9.524558867985473E-4 23 0.0 0.0 0.0 0.0014493893929543112 9.524558867985473E-4 24 0.0 0.0 0.0 0.0022776119032139174 9.524558867985473E-4 25 0.0 0.0 0.0 0.003023012162447563 9.524558867985473E-4 26 0.0 0.0 0.0 0.005383446316687441 9.524558867985473E-4 27 0.0 0.0 0.0 0.015280705314289737 0.001035278137824508 28 0.0 0.0 0.0 0.03900928023322746 0.001035278137824508 29 0.0 0.0 0.0 0.07375321453861794 0.001035278137824508 30 0.0 0.0 0.0 0.11599256256185787 0.001035278137824508 31 0.0 0.0 0.0 0.2552995887875237 0.001035278137824508 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1970 0.0 19.90863 1 CGCGTTC 95 1.6780177E-7 19.473684 26 GCGCGTT 90 2.1542146E-6 18.5 25 TATATCG 115 6.413575E-8 17.695652 5 CGAACTA 145 5.353104E-8 15.310344 24 GTATAGA 375 0.0 14.306666 1 TCTATAC 395 0.0 14.050632 3 GACGGAC 300 0.0 13.566666 7 CACCGGT 110 2.4581168E-4 13.454545 7 GTATCAA 2925 0.0 13.408546 2 AAGACGG 375 0.0 13.32 5 GCGCATT 85 0.009408653 13.058823 11 TACGTTA 100 0.0018334966 12.949999 19 AGACGGA 345 0.0 12.869565 6 GGCGCGT 130 7.0040354E-5 12.807693 24 TCTTATA 1360 0.0 12.786764 37 ATATCGC 160 2.6982962E-6 12.71875 6 CGCGGTT 335 0.0 12.701491 10 TAGGACC 500 0.0 12.58 4 CCGCCTA 135 9.9688375E-5 12.333334 15 >>END_MODULE