##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630180.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3071741 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8253928309711 31.0 31.0 34.0 30.0 34.0 2 32.01088275346131 33.0 31.0 34.0 30.0 34.0 3 32.170093116574606 34.0 31.0 34.0 30.0 34.0 4 35.814953799815804 37.0 35.0 37.0 35.0 37.0 5 35.72769090883639 37.0 35.0 37.0 35.0 37.0 6 35.78656696642067 37.0 35.0 37.0 35.0 37.0 7 35.76159122790626 37.0 35.0 37.0 33.0 37.0 8 35.74206484205537 37.0 35.0 37.0 33.0 37.0 9 37.447980151972445 39.0 37.0 39.0 35.0 39.0 10 37.35547951471169 39.0 37.0 39.0 34.0 39.0 11 37.439455344705166 39.0 37.0 39.0 34.0 39.0 12 37.31453140092215 39.0 37.0 39.0 34.0 39.0 13 37.35485869414121 39.0 37.0 39.0 34.0 39.0 14 38.57172040220839 40.0 38.0 41.0 34.0 41.0 15 38.55915781962086 40.0 38.0 41.0 34.0 41.0 16 38.550464052796116 40.0 38.0 41.0 34.0 41.0 17 38.51415076987285 40.0 38.0 41.0 34.0 41.0 18 38.49527841051703 40.0 38.0 41.0 34.0 41.0 19 38.50641313834728 40.0 38.0 41.0 34.0 41.0 20 38.45273836563695 40.0 38.0 41.0 34.0 41.0 21 38.4133483259168 40.0 38.0 41.0 34.0 41.0 22 38.37618503643374 40.0 38.0 41.0 34.0 41.0 23 38.324233716319185 40.0 38.0 41.0 34.0 41.0 24 38.30679572268625 40.0 38.0 41.0 34.0 41.0 25 38.28253749258157 40.0 38.0 41.0 34.0 41.0 26 38.13449148219202 40.0 38.0 41.0 33.0 41.0 27 38.03447946946048 40.0 38.0 41.0 33.0 41.0 28 37.94714756224565 40.0 37.0 41.0 33.0 41.0 29 37.88685536964217 40.0 37.0 41.0 33.0 41.0 30 37.822804396594634 40.0 37.0 41.0 33.0 41.0 31 37.72745879291255 40.0 37.0 41.0 33.0 41.0 32 37.62148045684841 40.0 37.0 41.0 32.0 41.0 33 37.5484062621165 40.0 37.0 41.0 32.0 41.0 34 37.47190143960705 40.0 37.0 41.0 32.0 41.0 35 37.3917260602375 40.0 37.0 41.0 32.0 41.0 36 37.2895133411313 39.0 36.0 41.0 31.0 41.0 37 37.23324622746514 39.0 36.0 41.0 31.0 41.0 38 37.128445399530754 39.0 36.0 41.0 31.0 41.0 39 37.04569005004003 39.0 36.0 41.0 31.0 41.0 40 36.94026905263171 39.0 36.0 41.0 30.0 41.0 41 36.82716511580892 39.0 35.0 41.0 30.0 41.0 42 36.750847809108905 39.0 35.0 41.0 30.0 41.0 43 35.59759790945916 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 3.0 11 7.0 12 4.0 13 8.0 14 4.0 15 10.0 16 28.0 17 70.0 18 143.0 19 241.0 20 478.0 21 977.0 22 1791.0 23 3093.0 24 5014.0 25 7914.0 26 12075.0 27 17977.0 28 25385.0 29 35924.0 30 48226.0 31 63391.0 32 83145.0 33 106967.0 34 142372.0 35 189701.0 36 266708.0 37 401716.0 38 725754.0 39 932610.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.516038624350166 18.905369951437965 11.579296561786947 25.999294862424925 2 18.255575584009197 21.04379894007991 34.269686148669436 26.43093932724146 3 19.329722134776336 22.516677024527784 30.269837203071482 27.883763637624398 4 13.750671036392717 15.171396286340547 35.5763067263809 35.50162595088583 5 14.392652245094883 36.732751882401544 34.21929127488287 14.655304597620697 6 34.83001984867865 35.94795264314277 15.484899280245306 13.73712822793328 7 29.90717641884521 30.891992521504907 20.791629242178946 18.409201817470937 8 27.6860256121854 33.57226406783645 19.728486223285103 19.013224096693047 9 26.628872681648613 13.750052494660196 19.325197013680516 40.29587781001068 10 16.56129211414634 26.74883722292993 33.10279089285197 23.58707977007176 11 36.65686657826946 21.478112900794695 21.522159583115894 20.342860937819953 12 21.877104873099654 25.554140143976984 29.278445025150234 23.290309957773133 13 29.975378783562807 19.285447568658945 25.455075802289322 25.28409784548893 14 22.74091467998116 20.057941082923332 25.081834698954108 32.1193095381414 15 24.922739254383753 27.73436953180623 22.17130285398411 25.171588359825908 16 25.028379671332967 26.504838786863864 23.882742718217454 24.584038823585715 17 23.674945250917965 26.490091449767412 25.335371699632226 24.499591599682393 18 24.090800624141163 25.180182834425167 26.381944311060078 24.34707223037359 19 24.374906608337096 25.09661459087859 26.171509902690364 24.356968898093946 20 24.365465708209122 25.25964916964028 26.028463988337556 24.34642113381304 21 25.04967052886295 25.156515474449183 25.891375607513783 23.902438389174087 22 24.959037887634405 24.990388187024884 25.80494253910079 24.24563138623992 23 24.207932895384083 24.981240280349155 26.124240292394447 24.686586531872315 24 24.13562862233502 25.53704885926255 25.841664385115802 24.485658133286627 25 24.757523502144224 24.904768989312576 25.99877398517648 24.338933523366716 26 24.727214957250627 25.453741054340195 25.677750825997375 24.141293162411806 27 24.47227809896733 24.992211257394423 25.765127984423163 24.770382659215084 28 23.95491677195441 24.940351416346626 26.656348956503823 24.448382855195145 29 23.838989029348504 25.245780812900563 26.340502014981084 24.57472814276985 30 23.51243154940472 25.946393266880246 26.47570221577926 24.065472967935772 31 24.592210085420614 25.608409042298813 25.623091269739213 24.17628960254136 32 23.95771648716477 25.423497619102655 25.683806024010487 24.934979869722092 33 23.58125245585484 25.096028603974098 26.710748074137765 24.6119708660333 34 24.653608491080465 24.779139907954477 26.204292614514046 24.362958986451005 35 24.241008600660017 25.119435525325866 26.73477353722205 23.904782336792067 36 24.045809851807167 25.116603255287473 26.354793584485147 24.48279330842021 37 24.114826087225453 24.931138400014845 26.636783504859295 24.317252007900407 38 23.802690396097848 24.729461240384527 27.054657277420198 24.413191086097427 39 24.018431241436044 24.68821427327369 26.959662289235975 24.33369219605429 40 23.70798840136587 25.00051273854143 27.16970603966936 24.121792820423337 41 23.594013948441617 24.43558880778034 27.52256782065936 24.44782942311868 42 23.759425029649307 24.61955614096371 27.49098963747269 24.130029191914293 43 23.14319468991689 24.02930455399723 27.717538685716015 25.109962070369868 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 467.0 1 440.5 2 414.0 3 938.5 4 1463.0 5 1463.0 6 1937.0 7 2411.0 8 2224.0 9 2037.0 10 2815.0 11 3593.0 12 3593.0 13 6114.0 14 8635.0 15 12701.0 16 16767.0 17 16622.0 18 16477.0 19 16477.0 20 20029.0 21 23581.0 22 23822.5 23 24064.0 24 28340.5 25 32617.0 26 32617.0 27 38423.5 28 44230.0 29 52836.5 30 61443.0 31 70974.5 32 80506.0 33 80506.0 34 95045.0 35 109584.0 36 123897.5 37 138211.0 38 150644.0 39 163077.0 40 163077.0 41 175035.5 42 186994.0 43 194070.5 44 201147.0 45 210538.0 46 219929.0 47 219929.0 48 225022.5 49 230116.0 50 232671.0 51 235226.0 52 232353.0 53 229480.0 54 229480.0 55 218612.5 56 207745.0 57 196354.5 58 184964.0 59 178806.0 60 172648.0 61 172648.0 62 158327.0 63 144006.0 64 128063.5 65 112121.0 66 96973.5 67 81826.0 68 81826.0 69 66977.0 70 52128.0 71 44092.0 72 36056.0 73 28533.5 74 21011.0 75 21011.0 76 15747.5 77 10484.0 78 8256.0 79 6028.0 80 4996.5 81 3965.0 82 3965.0 83 2969.5 84 1974.0 85 1810.0 86 1646.0 87 1533.0 88 1420.0 89 1420.0 90 1226.5 91 1033.0 92 595.5 93 158.0 94 100.0 95 42.0 96 42.0 97 24.5 98 7.0 99 8.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3071741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.30285997757641 #Duplication Level Percentage of deduplicated Percentage of total 1 80.90119618919515 39.88660347734327 2 10.593291030130372 10.445590887204677 3 3.2633027987543133 4.826704828542513 4 1.4990868057803226 2.9563706751847807 5 0.8101840720548444 1.9972195930291334 6 0.5479835308547061 1.62102931750485 7 0.37031282935634324 1.2780237101559155 8 0.2667982475991788 1.0523133314916058 9 0.1976605806166114 0.8770708736304521 >10 1.2921994532750627 12.195926655593732 >50 0.1341027434333586 4.631671241401193 >100 0.1079876548999688 10.70758625910983 >500 0.01178809750370851 3.8508204624516975 >1k 0.003841065478675913 2.863749574920257 >5k 2.6490106749489054E-4 0.8093191124361336 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7407 0.24113361119964216 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6649 0.2164570515548023 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5603 0.1824047014380444 No Hit GTTCTAGACATGTATTTTCCAGCTGCCTCTAGTTTTTGAACTT 5128 0.16694115812498514 No Hit GTCTAGAACTGATCCAGCAATTACAACGGAGTCAAAAATTAAA 3648 0.1187600126442952 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 6.510965605498641E-5 0.0 2 0.0 0.0 0.0 6.510965605498641E-5 0.0 3 0.0 0.0 0.0 6.510965605498641E-5 0.0 4 0.0 0.0 0.0 6.510965605498641E-5 0.0 5 0.0 0.0 0.0 6.510965605498641E-5 0.0 6 0.0 0.0 0.0 6.510965605498641E-5 0.0 7 0.0 0.0 0.0 6.510965605498641E-5 0.0 8 0.0 0.0 0.0 6.510965605498641E-5 0.0 9 0.0 0.0 0.0 6.510965605498641E-5 0.0 10 0.0 0.0 0.0 1.3021931210997282E-4 0.0 11 0.0 0.0 0.0 2.2788379619245242E-4 0.0 12 0.0 0.0 0.0 2.2788379619245242E-4 0.0 13 0.0 0.0 0.0 2.6043862421994563E-4 0.0 14 0.0 0.0 0.0 2.6043862421994563E-4 0.0 15 0.0 0.0 0.0 3.581031083024252E-4 0.0 16 0.0 0.0 0.0 5.534320764673845E-4 0.0 17 0.0 0.0 0.0 7.487610446323436E-4 0.0 18 0.0 0.0 0.0 9.115351847698097E-4 0.0 19 0.0 0.0 0.0 0.001106864152934769 0.0 20 0.0 0.0 0.0 0.001269638293072235 0.0 21 0.0 0.0 0.0 0.0016277414013746601 0.0 22 0.0 0.0 0.0 0.002213728305869538 0.0 23 0.0 0.0 0.0 0.0029299345224743883 0.0 24 0.0 0.0 0.0 0.004557675923849048 0.0 25 0.0 0.0 0.0 0.005924978701003763 0.0 26 0.0 0.0 0.0 0.008106152178845808 0.0 27 0.0 0.0 0.0 0.020704870625485677 0.0 28 0.0 0.0 0.0 0.051143634831191824 0.0 29 0.0 0.0 0.0 0.09584141371293999 0.0 30 0.0 0.0 0.0 0.1638158946343458 0.0 31 0.0 0.0 0.0 0.3185164374209935 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGAC 1050 0.0 22.72857 3 GTTCTAG 1085 0.0 22.336405 1 GTCTAGA 715 0.0 20.699299 1 GGTATCA 2530 0.0 20.035574 1 AAGACGG 730 0.0 19.767122 5 CTAGAAC 755 0.0 19.60265 3 GACGGAC 705 0.0 18.893618 7 CTCTAGT 1165 0.0 18.5794 27 CTAGACA 1470 0.0 18.2483 4 CTAGCGG 510 0.0 18.137255 29 ACGGACC 745 0.0 18.127516 8 CCTCTAG 1745 0.0 17.704872 26 GACATGT 1265 0.0 17.695652 7 TAGAACT 975 0.0 17.456411 4 TCTAGCG 530 0.0 17.452831 28 ACTGATC 935 0.0 17.411764 8 TATACTG 500 0.0 17.02 5 CAAGACG 845 0.0 16.857986 4 GCGCAAG 830 0.0 16.716866 1 CTAGTTT 1310 0.0 16.522902 29 >>END_MODULE