##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630172.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 25517 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.077477759924758 31.0 31.0 34.0 28.0 34.0 2 31.283928361484502 31.0 31.0 34.0 28.0 34.0 3 31.216835834933573 31.0 31.0 34.0 28.0 34.0 4 35.09370223772387 37.0 35.0 37.0 32.0 37.0 5 34.98467688207862 35.0 35.0 37.0 32.0 37.0 6 35.063839793079126 36.0 35.0 37.0 32.0 37.0 7 35.07540071324999 36.0 35.0 37.0 32.0 37.0 8 35.0819845593134 37.0 35.0 37.0 32.0 37.0 9 36.5834933573696 38.0 35.0 39.0 32.0 39.0 10 36.45013128502567 38.0 35.0 39.0 32.0 39.0 11 36.576204099227965 38.0 35.0 39.0 32.0 39.0 12 36.40090919778971 38.0 35.0 39.0 32.0 39.0 13 36.45926245248266 38.0 35.0 39.0 32.0 39.0 14 37.31927734451542 39.0 36.0 40.0 32.0 41.0 15 37.32915311361054 39.0 36.0 40.0 32.0 41.0 16 37.08715758122036 39.0 36.0 40.0 32.0 41.0 17 37.25919974918682 39.0 36.0 40.0 32.0 41.0 18 37.32660579221695 39.0 36.0 40.0 32.0 41.0 19 37.34228161617745 39.0 36.0 40.0 32.0 41.0 20 37.33777481678881 39.0 36.0 40.0 32.0 41.0 21 37.27624720774386 39.0 36.0 40.0 32.0 41.0 22 37.23744954344163 39.0 36.0 40.0 32.0 41.0 23 37.21068307402908 39.0 36.0 40.0 32.0 41.0 24 37.103891523298195 39.0 36.0 40.0 31.0 41.0 25 37.019046126112 39.0 36.0 40.0 31.0 41.0 26 36.76223694007916 39.0 35.0 40.0 31.0 41.0 27 36.61084767018066 38.0 35.0 40.0 30.0 41.0 28 36.37966845632324 38.0 35.0 40.0 30.0 41.0 29 36.30951914410001 38.0 35.0 40.0 30.0 41.0 30 36.124505231806246 38.0 35.0 40.0 30.0 41.0 31 35.88787866912254 38.0 35.0 40.0 30.0 41.0 32 35.71583650115609 38.0 34.0 40.0 29.0 41.0 33 35.653485911353215 38.0 34.0 40.0 29.0 41.0 34 35.50578046008543 38.0 34.0 40.0 28.0 41.0 35 35.36152369008896 38.0 34.0 40.0 27.0 41.0 36 35.19806403574088 38.0 34.0 40.0 27.0 41.0 37 35.04647881804287 38.0 34.0 40.0 26.0 41.0 38 34.899243641493904 38.0 33.0 40.0 26.0 41.0 39 34.69796606184113 38.0 33.0 40.0 25.0 41.0 40 34.44958263118705 37.0 33.0 40.0 24.0 41.0 41 34.2271426891876 37.0 33.0 40.0 23.0 41.0 42 34.01939883215112 37.0 33.0 40.0 23.0 41.0 43 32.77673707724262 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 7.0 20 9.0 21 27.0 22 47.0 23 76.0 24 84.0 25 152.0 26 252.0 27 336.0 28 442.0 29 617.0 30 757.0 31 954.0 32 1158.0 33 1394.0 34 1782.0 35 2328.0 36 3171.0 37 4349.0 38 5431.0 39 2143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.641493906023435 20.02586510953482 15.185954461731393 21.14668652271035 2 21.14668652271035 22.792648038562525 32.46855037817925 23.59211506054787 3 21.389661794098053 24.195634283027 32.6057138378336 21.808990085041344 4 15.362307481286985 19.60653681859153 32.74287729748795 32.28827840263354 5 14.151350080338599 36.64223850766156 33.51883058353255 15.687580828467295 6 30.258259199749187 33.59720970333503 17.20029784065525 18.94423325626053 7 25.351726300113647 32.993690480855896 21.083983226868362 20.57059999216209 8 28.298781204687074 32.053141043226084 20.77830465963867 18.86977309244817 9 26.34322216561508 13.120664654935926 20.45303131245836 40.08308186699063 10 22.004937884547555 26.515656229180546 27.260257867304148 24.219148018967747 11 33.04463690872751 22.98075792608849 18.12517145432457 25.849433710859426 12 20.135595877258297 29.944742720539246 27.150527099580675 22.769134302621783 13 33.58153387937454 18.39557941764314 25.9748403025434 22.048046400438924 14 22.871027158365013 23.44319473292315 26.66457655680527 27.02120155190657 15 30.17596112395658 24.481718070306073 23.38049143708116 21.96182936865619 16 21.63655602147588 25.383077948034643 28.05580593329937 24.92456009719011 17 20.60978955206333 29.047301798800802 25.551593055609985 24.791315593525884 18 20.41384175255712 22.882784026335383 29.207978994395894 27.495395226711604 19 22.29494062781675 27.471881490770862 28.561351256025397 21.671826625387 20 23.725359564212095 21.80507112905122 32.343143786495276 22.12642552024141 21 26.974174080025083 23.059137045890974 28.14986087706235 21.816827997021594 22 26.276599913782967 24.39941999451346 26.86836226829173 22.455617823411846 23 25.89254222675079 24.524826586197438 27.362150723047378 22.22048046400439 24 23.00819061801936 26.276599913782967 28.330132852608063 22.385076615589607 25 23.349139789160166 25.58294470353098 28.51824274013403 22.549672767174826 26 25.477132891797627 24.579691970059176 27.511071050672104 22.432104087471096 27 23.650899400399734 25.175373280558063 27.534584786612847 23.63914253242936 28 22.243994199945135 26.45295293333856 29.568522945487324 21.734529921228983 29 23.74887330015284 25.535917231649492 28.800407571422976 21.914801896774698 30 22.439941999451346 27.440529842849866 30.179880079946702 19.939648077752086 31 23.662656268370107 25.488889759767996 27.989183681467257 22.85927029039464 32 19.994513461613824 26.67633342477564 29.047301798800802 24.281851314809735 33 21.213308774542462 25.818082062938437 30.583532546929497 22.385076615589607 34 20.44519340047811 26.605792216953404 28.537837520084647 24.411176862483835 35 21.63655602147588 26.723360896657127 29.01203119488968 22.62805188697731 36 20.33938158874476 26.362816945565704 28.416349884390797 24.88145158129874 37 21.205470862562215 27.060391111807814 28.388917192459928 23.345220833170043 38 20.51573460830035 24.67766586981228 29.356899322020613 25.449700199866754 39 21.170200258651096 23.772387036093583 30.983266057922172 24.07414664733315 40 20.23748873300153 24.857937845358 31.759219343966766 23.14535407767371 41 19.29693929537171 25.100913116745698 31.720029784065524 23.882117803817064 42 18.881529960418543 24.724693341693772 32.82909432927068 23.564682368617003 43 18.3563898577419 26.65673864482502 31.44178390876671 23.54508758866638 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 4.0 2 5.0 3 16.5 4 28.0 5 28.0 6 48.0 7 68.0 8 71.5 9 75.0 10 95.5 11 116.0 12 116.0 13 238.0 14 360.0 15 519.5 16 679.0 17 541.5 18 404.0 19 404.0 20 484.0 21 564.0 22 390.5 23 217.0 24 212.0 25 207.0 26 207.0 27 213.5 28 220.0 29 241.0 30 262.0 31 289.5 32 317.0 33 317.0 34 409.0 35 501.0 36 523.5 37 546.0 38 631.0 39 716.0 40 716.0 41 951.0 42 1186.0 43 1519.5 44 1853.0 45 2310.0 46 2767.0 47 2767.0 48 3108.5 49 3450.0 50 2967.0 51 2484.0 52 2272.0 53 2060.0 54 2060.0 55 1941.5 56 1823.0 57 1624.5 58 1426.0 59 1231.5 60 1037.0 61 1037.0 62 896.5 63 756.0 64 636.5 65 517.0 66 411.0 67 305.0 68 305.0 69 260.5 70 216.0 71 184.0 72 152.0 73 124.5 74 97.0 75 97.0 76 70.0 77 43.0 78 39.5 79 36.0 80 23.5 81 11.0 82 11.0 83 9.0 84 7.0 85 4.5 86 2.0 87 1.5 88 1.0 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 25517.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.76208018183955 #Duplication Level Percentage of deduplicated Percentage of total 1 82.82859818919762 51.98495120899792 2 8.585700905401186 10.777128972841634 3 3.2344676865438653 6.090057608653055 4 1.667187012176085 4.185444997452679 5 1.0427724008741805 3.2723282517537324 6 0.5057758351545426 1.9046126112003763 7 0.39338120512019986 1.728259591644786 8 0.2684982828598189 1.3481208606027355 9 0.20605682172962847 1.1639299290668965 >10 1.2113643459256946 12.873770427558098 >50 0.031220730565095226 1.203119488968139 >100 0.024976584452076178 3.468276051259944 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 316 1.238390092879257 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 287 1.1247403691656543 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 150 0.5878433985186347 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 132 0.5173021906963985 No Hit AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA 69 0.2704079633185719 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63 0.24689422737782651 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGA 59 0.23121840341732963 No Hit CCACTGTTCCCATGTACTCTGCGTTGATACCCTGTCTCTTATA 59 0.23121840341732963 No Hit GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA 57 0.22338049143708116 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 50 0.19594779950621155 No Hit ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA 50 0.19594779950621155 No Hit GGTATCAACGCAGAGTACATGGGAACAGTGGCTGTCTCTTATA 47 0.18419093153583885 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 42 0.1645961515852177 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAATATGT 40 0.15675823960496924 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 39 0.152839283614845 No Hit GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAG 39 0.152839283614845 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38 0.14892032762472077 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 37 0.14500137163459653 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 36 0.1410824156444723 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35 0.1371634596543481 No Hit GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT 33 0.12932554767409962 No Hit GATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCAC 33 0.12932554767409962 No Hit GGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAA 32 0.1254065916839754 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 31 0.12148763569385117 No Hit GATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCC 30 0.11756867970372693 No Hit GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC 30 0.11756867970372693 No Hit CCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA 29 0.1136497237136027 No Hit ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG 29 0.1136497237136027 No Hit GTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTC 28 0.10973076772347846 No Hit GGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC 28 0.10973076772347846 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27 0.10581181173335424 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 26 0.10189285574323001 No Hit CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCC 26 0.10189285574323001 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.023513735940745385 0.0 17 0.0 0.0 0.0 0.03527060391111808 0.0 18 0.0 0.0 0.0 0.03527060391111808 0.0 19 0.0 0.0 0.0 0.050946427871615005 0.0 20 0.0 0.0 0.0 0.050946427871615005 0.0 21 0.0 0.0 0.0 0.07837911980248462 0.0 22 0.0 0.0 0.0 0.12148763569385115 0.0 23 0.0 0.0 0.0 0.14500137163459653 0.0 24 0.0 0.0 0.0 0.22338049143708116 0.0 25 0.0 0.0 0.0 0.23905631539757807 0.0 26 0.0 0.0 0.0 0.26257005133832345 0.0 27 0.0 0.0 0.0 0.3017596112395658 0.0 28 0.0 0.0 0.0 0.4036524669827958 0.0 29 0.0 0.0 0.0 0.5055453227260258 0.0 30 0.0 0.0 0.0 0.7485205941137281 0.0 31 0.0 0.0 0.0 1.3833914645138534 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTGATT 25 0.0053973924 29.6 15 ACAAAAA 25 0.0053973924 29.6 23 CAGTCGG 25 0.0053973924 29.6 10 TCGGTGA 25 0.0053973924 29.6 13 GCAGTCG 25 0.0053973924 29.6 9 AGTCGGT 25 0.0053973924 29.6 11 CGGTGAT 25 0.0053973924 29.6 14 GTCGGTG 25 0.0053973924 29.6 12 TGGGAAC 55 1.8098986E-5 23.545454 20 TCTTATA 105 3.45608E-11 22.90476 37 GGGAACA 60 8.903752E-4 18.5 21 CTCTTAT 140 1.5970727E-9 17.178572 36 TCTATGG 75 0.003959968 14.8 2 AGTACTT 150 7.093513E-8 14.8 12 GAGTACT 150 7.093513E-8 14.8 11 TCTCTTA 175 3.058267E-8 13.742858 35 GGTATCA 315 0.0 13.507937 1 ATGGGAA 240 8.9858077E-10 12.333334 19 CATGGGA 240 8.9858077E-10 12.333334 18 GTACTTT 180 6.556347E-7 12.333333 13 >>END_MODULE