ERR1630107.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630107.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55719
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	540	0.9691487643353255	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	465	0.8345447692887525	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	352	0.6317414167519159	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	232	0.41637502467739906	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	100	0.17947199339543063	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	81	0.14537231465029882	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	74	0.13280927511261867	No Hit
GTATAGTACGGATGCTACTTGTCCAATGATGGTAAAAGGGTAG	68	0.12204095550889284	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	63	0.11306735583912131	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTACTG	25	0.005452113	29.599998	5
GGTATCA	180	0.0	23.63889	1
CCCTGTC	60	9.0872956E-4	18.5	37
ATGAGTG	50	0.0069532194	18.499998	5
CTGCCTC	50	0.0069532194	18.499998	9
CTCTTAT	135	3.778532E-7	15.074075	37
GCTGTCT	135	3.778532E-7	15.074075	36
GTATCAA	320	0.0	13.296875	2
TATCAAC	385	0.0	11.051948	3
TCTCTTA	185	1.2961364E-5	11.0	36
CAACGCA	390	0.0	10.910256	6
ATCAACG	390	0.0	10.910256	4
TCAACGC	390	0.0	10.910256	5
CTGTCTC	425	0.0	10.882352	37
AACGCAG	410	0.0	10.378048	7
CGCAGAG	425	1.8189894E-12	10.011764	9
GAGTACG	225	1.0261672E-5	9.866667	1
GCAGAGT	465	7.2759576E-12	9.1505375	10
CAGAGTA	465	7.2759576E-12	9.1505375	11
GTCTCTT	225	1.1155985E-4	9.044444	35