##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630042.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3164537 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.8435132848818 34.0 31.0 34.0 31.0 34.0 2 33.06475512847535 34.0 33.0 34.0 31.0 34.0 3 33.1950174701702 34.0 33.0 34.0 31.0 34.0 4 36.474742118673284 37.0 37.0 37.0 35.0 37.0 5 36.43050341961557 37.0 37.0 37.0 35.0 37.0 6 36.47751598417083 37.0 37.0 37.0 35.0 37.0 7 36.40728738516883 37.0 37.0 37.0 35.0 37.0 8 36.41386180664028 37.0 37.0 37.0 35.0 37.0 9 38.19320109071248 39.0 39.0 39.0 37.0 39.0 10 38.171887388265645 39.0 39.0 39.0 37.0 39.0 11 38.206024767604234 39.0 39.0 39.0 37.0 39.0 12 38.136349172090576 39.0 39.0 39.0 37.0 39.0 13 38.155114950465105 39.0 39.0 39.0 37.0 39.0 14 39.60799478723112 41.0 40.0 41.0 37.0 41.0 15 39.59652612688681 41.0 40.0 41.0 37.0 41.0 16 39.52257028437335 41.0 39.0 41.0 37.0 41.0 17 39.452924709049064 41.0 39.0 41.0 37.0 41.0 18 39.35558566703439 41.0 39.0 41.0 36.0 41.0 19 39.378805493505055 41.0 39.0 41.0 36.0 41.0 20 39.6019787412819 41.0 40.0 41.0 37.0 41.0 21 39.61514464833244 41.0 40.0 41.0 37.0 41.0 22 39.625014970594435 41.0 40.0 41.0 37.0 41.0 23 39.55892283768526 41.0 40.0 41.0 37.0 41.0 24 39.53192457538022 41.0 40.0 41.0 37.0 41.0 25 39.50631229781798 41.0 40.0 41.0 37.0 41.0 26 39.37496606928597 41.0 39.0 41.0 36.0 41.0 27 39.29252367723936 41.0 39.0 41.0 36.0 41.0 28 39.25442394890627 41.0 39.0 41.0 36.0 41.0 29 39.14972522046669 41.0 39.0 41.0 36.0 41.0 30 39.06956720682994 41.0 39.0 41.0 35.0 41.0 31 38.94613335220919 40.0 39.0 41.0 35.0 41.0 32 38.860988195113535 40.0 39.0 41.0 35.0 41.0 33 38.78709112897084 40.0 39.0 41.0 35.0 41.0 34 38.706343455614515 40.0 38.0 41.0 35.0 41.0 35 38.5875153300467 40.0 38.0 41.0 35.0 41.0 36 38.55935923643806 40.0 38.0 41.0 35.0 41.0 37 38.51604895123678 40.0 38.0 41.0 35.0 41.0 38 38.419398161563606 40.0 38.0 41.0 35.0 41.0 39 38.377864123566894 40.0 38.0 41.0 35.0 41.0 40 38.31701951975913 40.0 38.0 41.0 34.0 41.0 41 38.2114312457083 40.0 38.0 41.0 34.0 41.0 42 38.11667962801509 40.0 38.0 41.0 34.0 41.0 43 37.8240342900083 40.0 38.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 5.0 14 7.0 15 16.0 16 23.0 17 36.0 18 62.0 19 139.0 20 346.0 21 590.0 22 1045.0 23 1861.0 24 3092.0 25 4526.0 26 6702.0 27 9688.0 28 13513.0 29 17755.0 30 23249.0 31 30574.0 32 39245.0 33 51341.0 34 69954.0 35 98625.0 36 150425.0 37 267923.0 38 570468.0 39 1803325.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.879448083558515 19.751072589765897 12.121488862351743 25.24799046432385 2 18.473571331287957 21.427083962045632 35.695711568548575 24.403633138117836 3 18.849676903761907 23.478000099224623 31.293456199121707 26.37886679789176 4 13.841424511705819 15.917715608950061 36.62624263833856 33.614617241005554 5 13.914547372964828 36.80588977155268 35.37275753135451 13.906805324127985 6 33.38188177291022 36.81252581341283 15.460808326778924 14.344784086898022 7 27.810229426927226 31.322812784303046 22.41244137768021 18.45451641108952 8 25.889348110007877 34.947166046723424 20.390818625283888 18.77266721798481 9 25.67193873858956 14.493336623967423 21.019788992828968 38.814935644614046 10 15.651231127965955 27.495491441560016 35.30712391733767 21.54615351313636 11 34.39615337093546 22.284176168583272 22.860911406629153 20.458759053852113 12 20.145569478252266 26.01119847864 31.595490904356627 22.247741138751103 13 29.556772444120575 21.005916505321316 25.43951927248757 23.99779177807054 14 21.177157985512572 21.965424957900634 26.975668162514772 29.881748894072025 15 23.695820273234283 28.997764917901105 23.73908094612261 23.567333862742007 16 23.126890284423915 27.919534516423727 25.351070314551542 23.602504884600812 17 22.06594519198227 27.469042074717407 27.464586446611307 23.000426286689017 18 22.47870699568373 26.592136543197313 27.990508564128024 22.938647896990936 19 23.187120264354625 26.268013298627892 28.329389101786457 22.215477335231032 20 23.147841216582393 26.54947627409634 28.018000737548654 22.284681771772615 21 22.932106655728784 26.586985710705864 27.66433130660188 22.81657632696347 22 22.829153206298425 26.84086171215568 27.745354217694405 22.58463086385149 23 23.001658694463046 26.590840935024616 27.619174621753512 22.788325748758822 24 23.04649937731807 26.562495556221972 27.493311027805962 22.897694038653995 25 23.143891191665634 26.522837306057728 27.57139512036042 22.761876381916217 26 22.826783191348373 26.649301303792623 27.634848320623206 22.8890671842358 27 22.47216575442158 26.88567079481137 27.841829626261283 22.800333824505763 28 22.664263366173316 26.782875346377683 27.670272144076684 22.882589143372318 29 22.733657403910904 26.781390137008987 27.982260912101836 22.50269154697828 30 22.790442962114206 26.890505625309487 27.545293355710488 22.773758056865823 31 22.8848011573257 26.80063465840343 27.61683620700279 22.69772797726808 32 22.386718815422288 26.804079080130837 27.94443547349897 22.86476663094791 33 22.376985954027397 26.6191231134286 28.105217287710648 22.89867364483335 34 22.687995115873193 26.1739395052104 28.05156014924142 23.086505229674987 35 22.37186672173528 26.298918293576595 28.346864012018187 22.982350972669934 36 22.5167220354826 26.126412805411974 28.26283908198893 23.094026077116496 37 22.358341836420305 25.508628908431152 28.66738483386353 23.46564442128501 38 21.96296014235258 25.62491764198049 29.26029937396845 23.151822841698486 39 21.634128468082377 25.66030986523463 29.607237962457067 23.098323704225926 40 21.675366728213323 25.190825703728535 29.909146266894655 23.224661301163486 41 21.235333952486574 25.042462767855138 30.24553038880569 23.476672890852594 42 20.81546210393495 25.451685349231184 29.946339701510837 23.78651284532303 43 20.71007543915587 25.05115282267201 30.510024057231753 23.72874768094037 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3680.0 1 2762.5 2 1845.0 3 3446.5 4 5048.0 5 5048.0 6 5474.5 7 5901.0 8 5225.5 9 4550.0 10 5966.5 11 7383.0 12 7383.0 13 11763.0 14 16143.0 15 20687.5 16 25232.0 17 26882.5 18 28533.0 19 28533.0 20 36583.5 21 44634.0 22 45846.0 23 47058.0 24 55923.5 25 64789.0 26 64789.0 27 75177.0 28 85565.0 29 93926.0 30 102287.0 31 112122.0 32 121957.0 33 121957.0 34 134227.5 35 146498.0 36 155927.5 37 165357.0 38 173195.0 39 181033.0 40 181033.0 41 185799.0 42 190565.0 43 195675.0 44 200785.0 45 200034.5 46 199284.0 47 199284.0 48 201245.5 49 203207.0 50 201797.5 51 200388.0 52 199301.0 53 198214.0 54 198214.0 55 192787.5 56 187361.0 57 177621.0 58 167881.0 59 158901.0 60 149921.0 61 149921.0 62 136582.5 63 123244.0 64 108318.0 65 93392.0 66 80354.5 67 67317.0 68 67317.0 69 57741.5 70 48166.0 71 40033.0 72 31900.0 73 26056.0 74 20212.0 75 20212.0 76 15941.0 77 11670.0 78 8998.5 79 6327.0 80 4971.5 81 3616.0 82 3616.0 83 2742.5 84 1869.0 85 1400.0 86 931.0 87 669.0 88 407.0 89 407.0 90 318.5 91 230.0 92 156.0 93 82.0 94 62.0 95 42.0 96 42.0 97 30.0 98 18.0 99 16.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3164537.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.067228903057114 #Duplication Level Percentage of deduplicated Percentage of total 1 80.70963907391074 49.2871400400963 2 11.284400484428915 13.782141348327784 3 3.429300481012295 6.282536323540251 4 1.5047918326616185 3.6757386918639146 5 0.822545260767843 2.5115279861217332 6 0.4980055597816553 1.8247091708508862 7 0.3453850207760674 1.476419428639347 8 0.2298843988951583 1.1230722566857858 9 0.16910608502642968 0.9294156002887938 >10 0.9050504205600014 9.88486006498488 >50 0.061749290005817616 2.5776334960707294 >100 0.03760131598047013 4.238207516097351 >500 0.0017111349876300726 0.7622382164316899 >1k 6.222309039518659E-4 0.58757445719565 >5k 1.5555772598796648E-4 0.7257602155057287 >10k+ 5.1852575329322165E-5 0.3310251872991661 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10454 0.33034848383823606 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 9646 0.3048155227763177 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7846 0.24793516397501433 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5428 0.17152588198526356 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.32003986681148E-5 0.0 5 0.0 0.0 0.0 6.32003986681148E-5 0.0 6 0.0 3.16001993340574E-5 0.0 6.32003986681148E-5 0.0 7 0.0 3.16001993340574E-5 0.0 6.32003986681148E-5 0.0 8 0.0 3.16001993340574E-5 0.0 6.32003986681148E-5 0.0 9 0.0 3.16001993340574E-5 0.0 9.48005980021722E-5 0.0 10 0.0 3.16001993340574E-5 0.0 2.212013953384018E-4 0.0 11 0.0 3.16001993340574E-5 0.0 2.212013953384018E-4 0.0 12 0.0 3.16001993340574E-5 0.0 3.792023920086888E-4 0.0 13 0.0 3.16001993340574E-5 0.0 3.792023920086888E-4 0.0 14 0.0 6.32003986681148E-5 0.0 3.792023920086888E-4 0.0 15 0.0 6.32003986681148E-5 0.0 4.74002990010861E-4 0.0 16 0.0 6.32003986681148E-5 0.0 5.688035880130332E-4 0.0 17 0.0 6.32003986681148E-5 0.0 5.688035880130332E-4 0.0 18 0.0 6.32003986681148E-5 0.0 5.688035880130332E-4 0.0 19 0.0 6.32003986681148E-5 0.0 6.320039866811479E-4 0.0 20 0.0 6.32003986681148E-5 0.0 8.848055813536072E-4 0.0 21 0.0 6.32003986681148E-5 0.0 0.001358808571364468 0.0 22 0.0 6.32003986681148E-5 0.0 0.001959212358711559 0.0 23 0.0 6.32003986681148E-5 0.0 0.00316001993340574 0.0 24 0.0 6.32003986681148E-5 0.0 0.0069836440528266855 0.0 25 0.0 6.32003986681148E-5 0.0 0.011565672956265009 0.0 26 0.0 6.32003986681148E-5 0.0 0.020919331959145998 0.0 27 0.0 6.32003986681148E-5 0.0 0.0760300795977421 0.0 28 0.0 6.32003986681148E-5 0.0 0.1723790873672831 0.0 29 0.0 9.48005980021722E-5 0.0 0.2815893762657855 0.0 30 0.0 9.48005980021722E-5 0.0 0.4088433789840346 0.0 31 0.0 9.48005980021722E-5 0.0 0.6674594103339604 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2395 0.0 27.18998 1 GTATCAA 3785 0.0 17.058125 2 CGAATTA 370 0.0 15.0 15 GTATTAG 510 0.0 14.509804 1 TATACTG 500 0.0 13.69 5 ACGTTAC 95 0.001245918 13.631579 1 CCGAATT 430 0.0 12.906977 14 CTATACT 620 0.0 12.830645 4 TACACCG 160 2.6990474E-6 12.718751 5 TACGTTA 220 4.092726E-9 12.613636 19 ATTACGT 235 8.112693E-10 12.595745 17 GTATAGA 400 0.0 12.487499 1 GTATGCG 105 0.0026453347 12.333334 3 CCCGATT 105 0.0026453347 12.333334 13 GTCTAGA 350 0.0 12.157144 1 TAGAGAG 825 0.0 12.10909 5 TGCGCAA 260 3.092282E-10 12.096154 10 CTTATAC 2785 0.0 12.089767 37 ATTATAC 700 0.0 11.892858 3 GGACCGT 140 1.399792E-4 11.892857 6 >>END_MODULE