Basic Statistics
Measure | Value |
---|---|
Filename | ERR1630040.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 304833 |
Sequences flagged as poor quality | 0 |
Sequence length | 43 |
%GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 2081 | 0.6826688711524015 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1991 | 0.6531445086325955 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 1346 | 0.44155324390731976 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 873 | 0.2863863164421175 | No Hit |
CTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATT | 522 | 0.17124130261487439 | No Hit |
GGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAATTAA | 453 | 0.1486059580163565 | No Hit |
TCCTAGTCCTGTATGCCCTTTTCCTAACACTCACAACAAAACT | 414 | 0.13581206759110726 | No Hit |
GCTCATGAGTGCAAGACGTCTTGTGATGTAATTATTATACGAA | 408 | 0.13384377675645354 | No Hit |
CCTACATACTTCCCCCATTATTCCTAGAACCAGGCGACCTGCG | 390 | 0.12793890425249232 | No Hit |
GTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTGTACTC | 377 | 0.1236742741107426 | No Hit |
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 372 | 0.12203403174853115 | No Hit |
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 345 | 0.11317672299258938 | No Hit |
GGACTAGGAAGCAGATAAGGAAAATGATTATGAGGGCGTGATC | 343 | 0.1125206260477048 | No Hit |
TCCTAGTCCTCATCGCCCTCCCATCCCTACGCATCCTTTACAT | 332 | 0.10891209285083964 | No Hit |
GTATAGTACGGATGCTACTTGTCCAATGATGGTAAAAGGGTAG | 328 | 0.10759989896107049 | No Hit |
GGACTAGGATGATGGCGGGCAGGATAGTTCAGACGGTTTCTAT | 325 | 0.10661575354374363 | No Hit |
GGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACC | 306 | 0.10038283256734015 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCTAAG | 20 | 0.0018398152 | 37.0 | 1 |
CTCTAAT | 40 | 1.5949645E-6 | 32.375 | 1 |
GCTCTAG | 30 | 3.59333E-4 | 30.833332 | 1 |
AACTTCC | 25 | 0.0054900865 | 29.6 | 22 |
AGGGTTG | 25 | 0.0054900865 | 29.6 | 5 |
ATTTGGG | 25 | 0.0054900865 | 29.6 | 11 |
GCCGAGT | 45 | 3.995565E-6 | 28.777777 | 12 |
CCGAGTT | 45 | 3.995565E-6 | 28.777777 | 13 |
CCCCTTG | 40 | 5.9260365E-5 | 27.75 | 9 |
AGTCCAA | 40 | 5.9260365E-5 | 27.75 | 30 |
ACTGTTA | 40 | 5.9260365E-5 | 27.75 | 24 |
GAGTTCC | 40 | 5.9260365E-5 | 27.75 | 15 |
GGTATCA | 460 | 0.0 | 27.347826 | 1 |
ATCTCGT | 35 | 8.854387E-4 | 26.428572 | 37 |
GAATCTC | 35 | 8.854387E-4 | 26.428572 | 35 |
CGAGTTC | 45 | 1.3200984E-4 | 24.666666 | 14 |
ACCAGTA | 45 | 1.3200984E-4 | 24.666666 | 12 |
CCCTTGT | 45 | 1.3200984E-4 | 24.666666 | 10 |
CAGTATT | 45 | 1.3200984E-4 | 24.666666 | 14 |
TAGTCCA | 45 | 1.3200984E-4 | 24.666666 | 29 |