##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630037.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3112168 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.85648975248123 34.0 31.0 34.0 31.0 34.0 2 33.07784252006961 34.0 33.0 34.0 31.0 34.0 3 33.20229145727352 34.0 33.0 34.0 31.0 34.0 4 36.49013870716491 37.0 37.0 37.0 35.0 37.0 5 36.4389052904599 37.0 37.0 37.0 35.0 37.0 6 36.485169823737024 37.0 37.0 37.0 35.0 37.0 7 36.4167384280026 37.0 37.0 37.0 35.0 37.0 8 36.42165750692122 37.0 37.0 37.0 35.0 37.0 9 38.20069610637986 39.0 39.0 39.0 37.0 39.0 10 38.17979331449973 39.0 39.0 39.0 37.0 39.0 11 38.21559504499757 39.0 39.0 39.0 37.0 39.0 12 38.15510955706761 39.0 39.0 39.0 37.0 39.0 13 38.166121494726504 39.0 39.0 39.0 37.0 39.0 14 39.627453916369554 41.0 40.0 41.0 37.0 41.0 15 39.61403336837857 41.0 40.0 41.0 37.0 41.0 16 39.532783255916776 41.0 39.0 41.0 37.0 41.0 17 39.46933166847034 41.0 39.0 41.0 37.0 41.0 18 39.36547030880081 41.0 39.0 41.0 36.0 41.0 19 39.39564637898725 41.0 39.0 41.0 36.0 41.0 20 39.60862716922737 41.0 40.0 41.0 37.0 41.0 21 39.61258678837389 41.0 40.0 41.0 37.0 41.0 22 39.62699185905131 41.0 40.0 41.0 37.0 41.0 23 39.55878795746245 41.0 40.0 41.0 37.0 41.0 24 39.52704416985201 41.0 40.0 41.0 37.0 41.0 25 39.49744165482069 41.0 40.0 41.0 37.0 41.0 26 39.36056086946463 41.0 39.0 41.0 36.0 41.0 27 39.279055629387614 41.0 39.0 41.0 36.0 41.0 28 39.24026305777837 41.0 39.0 41.0 36.0 41.0 29 39.13441690808465 41.0 39.0 41.0 36.0 41.0 30 39.04322453029528 41.0 39.0 41.0 35.0 41.0 31 38.91345936337627 40.0 39.0 41.0 35.0 41.0 32 38.82425081165284 40.0 39.0 41.0 35.0 41.0 33 38.74933519013113 40.0 39.0 41.0 35.0 41.0 34 38.67880493598032 40.0 38.0 41.0 35.0 41.0 35 38.548516339734874 40.0 38.0 41.0 35.0 41.0 36 38.5329133902797 40.0 38.0 41.0 35.0 41.0 37 38.48625716863614 40.0 38.0 41.0 35.0 41.0 38 38.38450816279841 40.0 38.0 41.0 35.0 41.0 39 38.32763783960249 40.0 38.0 41.0 35.0 41.0 40 38.26592330491156 40.0 38.0 41.0 34.0 41.0 41 38.16066645502428 40.0 38.0 41.0 34.0 41.0 42 38.06963088110925 40.0 38.0 41.0 34.0 41.0 43 37.76755143038551 40.0 38.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 7.0 13 1.0 14 5.0 15 10.0 16 31.0 17 76.0 18 142.0 19 232.0 20 401.0 21 654.0 22 1150.0 23 1969.0 24 3244.0 25 4870.0 26 6927.0 27 9726.0 28 13338.0 29 17879.0 30 23519.0 31 29997.0 32 39051.0 33 50220.0 34 68325.0 35 95979.0 36 146807.0 37 262748.0 38 562384.0 39 1772475.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.207275442713886 19.309304639081184 12.26926052835194 25.21415938985299 2 18.561530097346928 21.57634163708386 35.324089187987276 24.53803907758193 3 18.849528688682614 23.230429719732353 31.52358741558939 26.396454175995643 4 14.171921310160634 16.040425838193826 36.00027376414127 33.78737908750427 5 13.998955069263614 36.69053213065618 35.31544569573365 13.995067104346552 6 33.40719395611033 36.20582179368209 15.597326365414721 14.78965788479285 7 27.988366951912624 31.234432074361024 22.166027026818604 18.61117394690775 8 25.990981206670078 34.51545674912151 20.56408908516507 18.92947295904334 9 25.676473763627154 14.60836947105683 20.63661087704777 39.07854588826824 10 16.05549571874012 27.385378938412064 34.73112634022328 21.827999002624537 11 34.02342032949378 22.39030797823254 22.728785849607092 20.85748584266659 12 20.157652157595603 25.916917081597134 31.125215605327217 22.80021515548004 13 29.337619305898656 20.857614370432444 25.62772960842731 24.17703671524159 14 21.534409453474236 21.9251659936096 26.81751113693091 29.722913415985253 15 24.12520789366127 28.554788816027926 23.59920801190681 23.720795278403994 16 23.21352831852265 27.898044064459242 25.291693764603966 23.596733852414136 17 22.54023561710036 27.429174774626564 27.051399538842375 22.9791900694307 18 22.358593752008247 26.660867922297253 27.828831862547265 23.151706463147235 19 23.54721853061917 26.226733261186414 28.203875883307074 22.022172324887347 20 23.61479200351652 26.13673169314767 27.85813619316181 22.390340110174 21 22.920902727616248 26.406736397263902 27.4332555311924 23.23910534392745 22 23.060612409098738 26.539409183565926 27.40141277720226 22.99856563013308 23 23.01302500379157 26.548406127175657 27.438268114060683 23.0003007549721 24 23.214267353176307 26.466566072268595 27.496683983640985 22.822482590914113 25 23.40124312055133 26.064113505440577 27.52653455726041 23.008108816747683 26 23.125294007264387 26.587092984697485 27.51766614141653 22.769946866621595 27 23.002485726991605 26.706527411116625 27.12572071944702 23.16526614244475 28 22.85255808812378 26.70482441821907 27.441545572089936 23.001071921567213 29 22.72595823875832 26.74164762313603 27.75933047316212 22.77306366494354 30 22.68797828394868 27.14750617575915 27.491350081358075 22.673165458934093 31 23.03474619622077 26.581951874063353 27.561269185982244 22.82203274373363 32 22.428448592749493 26.66221746383871 27.972750828361452 22.936583115050343 33 22.561024983227128 26.53905573220983 27.977249300166314 22.92266998439673 34 22.900177625372407 26.049814791489407 27.772600964986466 23.27740661815172 35 22.62384292878791 26.261435757966794 28.188066968107123 22.926654345138182 36 22.805420529997093 26.01832548885536 27.999259680068683 23.176994301078864 37 22.731549196572935 25.31219394325756 28.466554504769665 23.489702355399835 38 22.34021428149123 25.630300163744373 28.872156001861082 23.157329552903313 39 22.060184411638446 25.76239457510006 29.10491978582133 23.072501227440164 40 21.723088213746816 25.320291192506318 29.600394323185636 23.35622627056123 41 21.425482171913597 25.249118942165076 29.79202922207285 23.53336966384848 42 21.43239053932821 25.258533601013827 29.474244321000665 23.834831538657298 43 21.291491976011578 25.096203032741165 29.778662334424105 23.833642656823155 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2935.0 1 2325.0 2 1715.0 3 3156.5 4 4598.0 5 4598.0 6 5114.0 7 5630.0 8 4970.5 9 4311.0 10 5876.5 11 7442.0 12 7442.0 13 11700.5 14 15959.0 15 21336.0 16 26713.0 17 27723.5 18 28734.0 19 28734.0 20 35669.0 21 42604.0 22 44004.0 23 45404.0 24 52988.5 25 60573.0 26 60573.0 27 68374.0 28 76175.0 29 87486.0 30 98797.0 31 109039.5 32 119282.0 33 119282.0 34 128547.0 35 137812.0 36 148807.5 37 159803.0 38 165256.0 39 170709.0 40 170709.0 41 178315.0 42 185921.0 43 184859.5 44 183798.0 45 186752.5 46 189707.0 47 189707.0 48 191342.5 49 192978.0 50 200608.5 51 208239.0 52 215680.5 53 223122.0 54 223122.0 55 208908.5 56 194695.0 57 182985.5 58 171276.0 59 157345.5 60 143415.0 61 143415.0 62 132505.5 63 121596.0 64 107005.5 65 92415.0 66 80281.0 67 68147.0 68 68147.0 69 57658.0 70 47169.0 71 40440.0 72 33711.0 73 27283.5 74 20856.0 75 20856.0 76 16160.0 77 11464.0 78 9352.0 79 7240.0 80 5468.0 81 3696.0 82 3696.0 83 2764.5 84 1833.0 85 1396.5 86 960.0 87 691.5 88 423.0 89 423.0 90 307.0 91 191.0 92 128.5 93 66.0 94 49.0 95 32.0 96 32.0 97 25.5 98 19.0 99 11.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3112168.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.63708406219563 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21909588977287 45.43375677302398 2 11.754315016147348 13.314602553261315 3 3.549716014327769 6.031366929012117 4 1.513982449574121 3.429902050608734 5 0.8002236354773526 2.2661166655543306 6 0.4657828282304217 1.5828348718328178 7 0.3321637316533007 1.3168949634442408 8 0.21063602223409056 0.9543848078238955 9 0.1491280526771535 0.7601560249956734 >10 0.8383928527577346 8.711138166277657 >50 0.08147691601606172 3.2430815268369404 >100 0.07783033014550976 8.622745237909141 >500 0.00577072724136742 2.2300973412930643 >1k 0.0012569900919437956 0.9826472590295664 >5k 1.1427182654034507E-4 0.43281654118159957 >10k+ 1.1427182654034507E-4 0.6874582879149084 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10868 0.3492099398233 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10376 0.33340102462334936 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7841 0.2519465530138476 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5534 0.17781816405798145 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 6.426388292662864E-5 0.0 0.0 0.0 6 0.0 6.426388292662864E-5 0.0 0.0 0.0 7 0.0 6.426388292662864E-5 0.0 0.0 0.0 8 0.0 6.426388292662864E-5 0.0 0.0 0.0 9 0.0 6.426388292662864E-5 0.0 0.0 0.0 10 0.0 6.426388292662864E-5 0.0 9.639582438994296E-5 0.0 11 0.0 6.426388292662864E-5 0.0 1.2852776585325727E-4 0.0 12 0.0 6.426388292662864E-5 0.0 3.8558329755977185E-4 0.0 13 0.0 6.426388292662864E-5 0.0 3.8558329755977185E-4 0.0 14 0.0 6.426388292662864E-5 0.0 3.8558329755977185E-4 0.0 15 0.0 6.426388292662864E-5 0.0 3.8558329755977185E-4 0.0 16 0.0 6.426388292662864E-5 0.0 4.1771523902308614E-4 0.0 17 0.0 6.426388292662864E-5 0.0 5.462430048763434E-4 0.0 18 0.0 6.426388292662864E-5 0.0 5.462430048763434E-4 0.0 19 0.0 6.426388292662864E-5 0.0 7.06902712192915E-4 0.0 20 0.0 6.426388292662864E-5 0.0 9.318263024361153E-4 0.0 21 0.0 6.426388292662864E-5 0.0 0.0012531457170692586 0.0 22 0.0 6.426388292662864E-5 0.0 0.0019921803707254877 0.0 23 0.0 6.426388292662864E-5 0.0 0.003084666380478175 0.0 24 0.0 9.639582438994296E-5 0.0 0.0049804509268137195 0.0 25 0.0 9.639582438994296E-5 0.0 0.00899694360972801 0.0 26 0.0 9.639582438994296E-5 0.0 0.01690140120970333 0.0 27 0.0 9.639582438994296E-5 0.0 0.06240023032175641 0.0 28 0.0 9.639582438994296E-5 0.0 0.14816038208734233 0.0 29 0.0 1.2852776585325727E-4 0.0 0.2479621922723966 0.0 30 0.0 1.2852776585325727E-4 0.0 0.3583354111988813 0.0 31 0.0 1.2852776585325727E-4 0.0 0.5778287033347814 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2915 0.0 26.655233 1 CGCGAAT 120 5.18412E-9 18.5 28 GTATCAA 4470 0.0 17.299776 2 CGTGCGA 150 4.6802597E-9 16.033333 10 ATTCGCG 95 7.065872E-5 15.578948 30 CGCGCTT 170 1.4897523E-9 15.235294 12 CGACGTT 75 0.0041065 14.8 24 TAACGGC 140 6.0038474E-7 14.535714 36 TAGGACA 755 0.0 14.456954 4 TTAGACT 220 1.8189894E-11 14.295454 4 ATTAGAC 170 3.7371137E-7 13.058824 3 CGCGGAA 215 2.904926E-9 12.906977 33 TATACTG 445 0.0 12.88764 5 TACGTTA 230 5.7661964E-10 12.869565 19 TTAGGAC 705 0.0 12.858155 3 CGGTCGA 290 0.0 12.758621 20 CGAATTA 350 0.0 12.685715 15 TATCAAC 6140 0.0 12.624594 3 TTCGCGG 220 4.092726E-9 12.613636 31 ATCAACG 6165 0.0 12.543391 4 >>END_MODULE