##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630029.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1481060 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7841647198628 34.0 31.0 34.0 31.0 34.0 2 33.02299906823491 34.0 33.0 34.0 31.0 34.0 3 33.155670263189876 34.0 33.0 34.0 31.0 34.0 4 36.45527392543178 37.0 37.0 37.0 35.0 37.0 5 36.40283648197912 37.0 37.0 37.0 35.0 37.0 6 36.4504989669561 37.0 37.0 37.0 35.0 37.0 7 36.3790643187987 37.0 37.0 37.0 35.0 37.0 8 36.38451649494281 37.0 37.0 37.0 35.0 37.0 9 38.146925175212345 39.0 39.0 39.0 37.0 39.0 10 38.11431542273777 39.0 39.0 39.0 37.0 39.0 11 38.15467097889349 39.0 39.0 39.0 37.0 39.0 12 38.0870977543111 39.0 38.0 39.0 37.0 39.0 13 38.10534954694611 39.0 38.0 39.0 37.0 39.0 14 39.54474903109935 41.0 39.0 41.0 37.0 41.0 15 39.52864569970156 41.0 39.0 41.0 37.0 41.0 16 39.442809879410696 41.0 39.0 41.0 37.0 41.0 17 39.37708533077661 41.0 39.0 41.0 36.0 41.0 18 39.268632600974975 41.0 39.0 41.0 36.0 41.0 19 39.293577572819466 41.0 39.0 41.0 36.0 41.0 20 39.50734473957841 41.0 39.0 41.0 37.0 41.0 21 39.51635922920071 41.0 39.0 41.0 37.0 41.0 22 39.52971993032018 41.0 40.0 41.0 37.0 41.0 23 39.46086113999433 41.0 39.0 41.0 37.0 41.0 24 39.4233609711963 41.0 39.0 41.0 36.0 41.0 25 39.39480709761927 41.0 39.0 41.0 36.0 41.0 26 39.24952871591968 41.0 39.0 41.0 36.0 41.0 27 39.16013598368736 41.0 39.0 41.0 36.0 41.0 28 39.11388870133553 41.0 39.0 41.0 36.0 41.0 29 38.99632087828987 40.0 39.0 41.0 35.0 41.0 30 38.90175144828704 40.0 39.0 41.0 35.0 41.0 31 38.7730254007265 40.0 39.0 41.0 35.0 41.0 32 38.68734487461683 40.0 38.0 41.0 35.0 41.0 33 38.60535629886703 40.0 38.0 41.0 35.0 41.0 34 38.528025198168876 40.0 38.0 41.0 35.0 41.0 35 38.388665550349074 40.0 38.0 41.0 35.0 41.0 36 38.37971722955181 40.0 38.0 41.0 35.0 41.0 37 38.32817103966078 40.0 38.0 41.0 34.0 41.0 38 38.230573373124656 40.0 38.0 41.0 34.0 41.0 39 38.172337379984604 40.0 38.0 41.0 34.0 41.0 40 38.111557263041334 40.0 38.0 41.0 34.0 41.0 41 38.00483572576398 40.0 38.0 41.0 34.0 41.0 42 37.90348939273223 40.0 38.0 41.0 33.0 41.0 43 37.6003612277693 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 3.0 14 2.0 15 6.0 16 9.0 17 22.0 18 53.0 19 84.0 20 188.0 21 351.0 22 625.0 23 1075.0 24 1732.0 25 2570.0 26 3513.0 27 5222.0 28 6901.0 29 9298.0 30 12182.0 31 15573.0 32 19557.0 33 25842.0 34 35367.0 35 49231.0 36 74568.0 37 132261.0 38 284373.0 39 800447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.256451460440495 19.180384319338852 12.205312411381037 25.357851808839616 2 18.675678230456565 21.460440495320917 35.141317704887044 24.722563569335477 3 19.054460994152837 23.295747640203636 31.010492485112014 26.63929888053151 4 14.128934681917006 16.039255668237615 35.95094054258436 33.88086910726101 5 14.124478414108815 36.63990655341445 35.15036527892185 14.085249753554887 6 33.68857439941663 36.20454269239598 15.489109151553619 14.617773756633762 7 28.218100549606362 30.954316503045114 22.279043387843842 18.54853955950468 8 26.37644659905743 34.45491742400713 20.336515738727666 18.832120238207768 9 25.835145098780604 14.563218235588025 20.47547027129218 39.126166394339194 10 16.24113810379053 27.170540018635304 34.58988832322796 21.99843355434621 11 34.42169797307334 22.306253629157496 22.494497184448974 20.777551213320187 12 20.38951831796146 25.793958381159438 31.13641581029803 22.68010749058107 13 29.712570726371652 20.752096471446126 25.342187352301732 24.19314544988049 14 21.554089638502155 21.504260462101467 26.790339351545516 30.151310547850862 15 24.001458414919043 28.58135389518318 23.380079132513202 24.037108557384578 16 23.308913886000568 27.637502869566394 25.281285025589778 23.77229821884326 17 22.644929982580045 27.301527284512446 27.014908241394675 23.038634491512834 18 22.831823153687225 26.499736675084062 27.511106909915874 23.157333261312843 19 23.62719943824018 26.088679729383006 27.921421144315556 22.36269968806125 20 23.71949819723711 26.198465963566637 27.478765208701876 22.603270630494375 21 23.076445248673245 26.317299771785073 27.350883826448623 23.255371153093055 22 23.41140804558897 26.293397971722953 27.38707412258788 22.9081198601002 23 23.312627442507395 26.232698202638648 27.23400807529742 23.220666279556536 24 23.128300001350386 26.32047317461818 27.286402981648276 23.26482384238316 25 23.52747356622959 26.047628050180275 27.285660270346913 23.13923811324322 26 23.084885149825123 26.55712800291683 27.32016258625579 23.037824261002253 27 23.022902515765736 26.716473336664283 27.13421468407762 23.126409463492365 28 23.09568822329953 26.524921340121267 27.30348534157968 23.075905094999527 29 22.88799913575412 26.608510121129463 27.590374461534307 22.91311628158211 30 23.030464667197815 26.788178736850632 27.355542651884463 22.825813944067086 31 23.18872969359783 26.397445073123304 27.34345671343497 23.070368519843896 32 22.745736161938073 26.455714150675867 27.733852781116227 23.064696906269834 33 22.666198533482778 26.3066317367291 27.80312748977084 23.224042240017283 34 23.122763426194755 25.84527298016286 27.607996975139425 23.423966618502963 35 22.727641013868446 25.917721091650574 28.098186434040485 23.256451460440495 36 22.779833362591656 25.692477009709265 27.9292533725845 23.59843625511458 37 22.59746397850188 25.065628671356997 28.583717067505702 23.75319028263541 38 22.355205055838386 25.18297705697271 28.959528985996513 23.50228890119239 39 22.005185475267712 25.24158373057135 29.2659986766235 23.48723211753744 40 21.75624215089193 24.949225554670303 29.660243339230014 23.634288955207758 41 21.50770394177143 24.729653086303053 29.876642404764155 23.886000567161357 42 21.08422346157482 25.069139670236183 29.753757443992818 24.092879424196184 43 21.010965119576518 24.856589199627294 30.003375960460748 24.129069720335437 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1591.0 1 1215.5 2 840.0 3 1515.5 4 2191.0 5 2191.0 6 2516.5 7 2842.0 8 2437.0 9 2032.0 10 2813.5 11 3595.0 12 3595.0 13 5678.0 14 7761.0 15 9986.0 16 12211.0 17 12559.0 18 12907.0 19 12907.0 20 16398.5 21 19890.0 22 20324.0 23 20758.0 24 24682.0 25 28606.0 26 28606.0 27 32335.5 28 36065.0 29 40037.0 30 44009.0 31 49732.5 32 55456.0 33 55456.0 34 60219.0 35 64982.0 36 70177.5 37 75373.0 38 77751.0 39 80129.0 40 80129.0 41 83247.5 42 86366.0 43 87535.5 44 88705.0 45 90592.5 46 92480.0 47 92480.0 48 92484.0 49 92488.0 50 94377.5 51 96267.0 52 97220.0 53 98173.0 54 98173.0 55 95281.5 56 92390.0 57 87372.0 58 82354.0 59 76961.5 60 71569.0 61 71569.0 62 66433.5 63 61298.0 64 54325.5 65 47353.0 66 41435.0 67 35517.0 68 35517.0 69 29949.5 70 24382.0 71 20518.0 72 16654.0 73 13550.5 74 10447.0 75 10447.0 76 8273.0 77 6099.0 78 4896.0 79 3693.0 80 2753.5 81 1814.0 82 1814.0 83 1383.0 84 952.0 85 703.0 86 454.0 87 325.5 88 197.0 89 197.0 90 149.5 91 102.0 92 69.0 93 36.0 94 25.5 95 15.0 96 15.0 97 11.0 98 7.0 99 8.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1481060.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.49847697682623 #Duplication Level Percentage of deduplicated Percentage of total 1 84.96811631937312 59.901227921056176 2 9.578132195460986 13.504874641254085 3 2.492088753908031 5.270653849247786 4 1.0233006415135697 2.8856454686446353 5 0.5513915059352696 1.9436130693197569 6 0.31996932817360735 1.3534410189322565 7 0.2094132064148071 1.0334318477754343 8 0.1416405251464765 0.7988353040819558 9 0.1092346618094666 0.6930789561581471 >10 0.5513732599522146 7.065816200464435 >50 0.03601164047994354 1.7654792322781672 >100 0.017789488298499155 2.1321238535873954 >500 9.615459587787486E-4 0.41621540741194074 >1k 5.769275752672492E-4 1.2355632297878572 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4808 0.32463235790582423 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4797 0.32388964660445896 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3617 0.2442169797307334 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2585 0.174537155820831 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.751920921502168E-5 0.0 5 0.0 2.02557627645065E-4 0.0 6.751920921502168E-5 0.0 6 0.0 2.02557627645065E-4 0.0 6.751920921502168E-5 0.0 7 0.0 2.02557627645065E-4 0.0 6.751920921502168E-5 0.0 8 0.0 2.02557627645065E-4 0.0 6.751920921502168E-5 0.0 9 0.0 2.02557627645065E-4 0.0 2.02557627645065E-4 0.0 10 0.0 2.02557627645065E-4 0.0 3.3759604607510837E-4 0.0 11 0.0 2.700768368600867E-4 0.0 4.726344645051517E-4 0.0 12 0.0 2.700768368600867E-4 0.0 5.401536737201734E-4 0.0 13 0.0 2.700768368600867E-4 0.0 5.401536737201734E-4 0.0 14 0.0 2.700768368600867E-4 0.0 6.076728829351951E-4 0.0 15 0.0 2.700768368600867E-4 0.0 6.076728829351951E-4 0.0 16 0.0 2.700768368600867E-4 0.0 7.427113013652384E-4 0.0 17 0.0 2.700768368600867E-4 0.0 9.452689290103034E-4 0.0 18 0.0 2.700768368600867E-4 0.0 9.452689290103034E-4 0.0 19 0.0 2.700768368600867E-4 0.0 0.0010127881382253252 0.0 20 0.0 2.700768368600867E-4 0.0 0.0012828649750854118 0.0 21 0.0 2.700768368600867E-4 0.0 0.0015529418119454984 0.0 22 0.0 2.700768368600867E-4 0.0 0.002228133904095715 0.0 23 0.0 3.3759604607510837E-4 0.0 0.003916114134471257 0.0 24 0.0 4.0511525529013E-4 0.0 0.007359593804437362 0.0 25 0.0 4.0511525529013E-4 0.0 0.013031207378499183 0.0 26 0.0 4.0511525529013E-4 0.0 0.023294127179182476 0.0 27 0.0 4.0511525529013E-4 0.0 0.08446653072799211 0.0 28 0.0 4.0511525529013E-4 0.0 0.19560314909591778 0.0 29 0.0 4.0511525529013E-4 0.0 0.3261852997177697 0.0 30 0.0 4.0511525529013E-4 0.0 0.47189175320378646 0.0 31 0.0 4.0511525529013E-4 0.0 0.7635747370126801 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1260 0.0 25.54762 1 GTCTAGC 70 5.103564E-6 21.142859 1 TAGACGT 70 1.21949866E-4 18.5 4 TTAACGG 60 9.238531E-4 18.5 35 GTATCAA 1885 0.0 16.782492 2 TACACCG 70 0.002592967 15.857143 5 CTAGTAC 75 0.004105149 14.8 3 TCTATAC 170 2.4378096E-8 14.147059 3 CTAGACT 105 1.6561395E-4 14.095239 4 AGGGTTG 210 1.364242E-10 14.095239 5 TAACGGC 80 0.006299752 13.875001 36 CCGTATG 80 0.006299752 13.875001 2 ACAATCG 80 0.006299752 13.875001 37 GGCTACG 175 3.56722E-8 13.742857 1 AACGGCC 95 0.00124537 13.631579 37 GCTACGA 150 1.306109E-6 13.566667 2 TAGTACC 110 2.45711E-4 13.454545 4 GTTCGGT 85 0.009406403 13.058824 25 CGCTATG 85 0.009406403 13.058824 2 GCTCGCG 85 0.009406403 13.058824 25 >>END_MODULE