ERR1630020.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630020.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	420851
Sequences flagged as poor quality	0
Sequence length	43
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	5283	1.25531363831855	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	4914	1.1676341508039663	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3695	0.8779829440823474	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2790	0.6629424665736804	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2346	0.5574419450114173	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2227	0.5291659043224324	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1580	0.3754297839377832	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1395	0.3314712332868402	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	940	0.2233569600642508	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	774	0.1839130713720533	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	542	0.1287866727178978	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGACG	20	0.0018406106	37.0	4
GGTATCA	1245	0.0	30.16466	1
GCCTTAA	25	0.005492436	29.599998	19
CGTCCGG	25	0.005492436	29.599998	9
GTACTTA	40	0.0019291645	23.125002	6
TATAGAG	40	0.0019291645	23.125002	2
GACCATC	65	2.6761409E-6	22.76923	7
CCATCGG	60	3.7190657E-5	21.583334	19
TTTAGAC	45	0.00382184	20.555555	3
GCAACTA	45	0.00382184	20.555555	18
ATATGAG	45	0.00382184	20.555555	31
TATTAGA	100	1.2840246E-8	20.349998	2
ACCATCG	55	5.1356526E-4	20.181818	18
ACCATCC	55	5.1356526E-4	20.181818	8
TCATGGA	55	5.1356526E-4	20.181818	2
ACCTCTA	65	6.88885E-5	19.923077	31
GCTCGGA	65	6.88885E-5	19.923077	11
TGAGCGT	65	6.88885E-5	19.923077	27
TACACTG	75	9.242905E-6	19.733334	5
TTAGGTT	60	9.2235586E-4	18.5	4