ERR1630019.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630019.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34205
Sequences flagged as poor quality	0
Sequence length	43
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	234	0.6841105101593334	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.5525507966671539	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	179	0.523315304780003	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	134	0.39175559128782345	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	61	0.17833650051162112	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	60	0.17541295132290602	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	60	0.17541295132290602	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53	0.15494810700190031	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46	0.1344832626808946	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45	0.13155971349217951	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTTAC	20	0.0018170815	37.0	1
GAAACCA	30	3.5276034E-4	30.833332	26
CTTACCC	25	0.0054230206	29.6	3
CGAAACC	25	0.0054230206	29.6	25
GGTATCA	105	1.8189894E-12	24.666666	1
CTCTTAT	90	2.0308871E-6	18.5	37
TACGGGG	70	0.0025242066	15.857142	4
GCTGTCT	80	0.0061354158	13.875	35
AACGCAG	190	6.2518666E-9	13.631579	7
TCTCTTA	150	1.2027613E-6	13.566667	37
GTATCAA	195	9.0058165E-9	13.282052	2
CGCAGAG	200	1.2843884E-8	12.950001	9
GAGTACG	150	1.8169729E-5	12.333333	1
ACGCAGA	215	3.5286575E-8	12.046512	8
AGTACGG	160	3.5203477E-5	11.5625	2
TATCAAC	225	6.642222E-8	11.511111	3
AGAGTAC	230	9.010728E-8	11.26087	12
ATCAACG	230	9.010728E-8	11.26087	4
CAACGCA	230	9.010728E-8	11.26087	6
TCAACGC	235	1.213757E-7	11.0212755	5