ERR1630018.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630018.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	284323
Sequences flagged as poor quality	0
Sequence length	43
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	4465	1.5703970484273169	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	4310	1.515881585380008	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3084	1.0846818583090359	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2260	0.7948706224962455	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1946	0.6844328457423423	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1511	0.5314378365450562	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1113	0.3914561959461598	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	965	0.3394027215526004	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	779	0.27398416589582975	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	631	0.2219306915022703	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	433	0.1522915838676435	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGATCA	25	0.0054894737	29.6	4
ACTATTG	25	0.0054894737	29.6	3
GGTATCA	1215	0.0	27.559671	1
CGGGACC	50	2.6951762E-4	22.2	4
CATTATG	45	0.003818834	20.555557	2
GTATCAA	1780	0.0	18.91573	2
ATCATCC	60	9.213527E-4	18.5	3
GGAGAGT	75	2.0603795E-4	17.266666	6
CAGAACT	65	0.0015759828	17.076923	4
CTTGCTC	120	1.9229647E-6	15.416666	3
TCACACC	100	1.0887732E-4	14.8	3
CCTGTAC	75	0.004094311	14.8	3
GTGTAAT	75	0.004094311	14.8	1
ATACACA	165	1.627268E-8	14.575757	37
TTGCTCT	160	1.7670027E-7	13.875	4
GTCTTGA	95	0.0012410438	13.631579	1
TTCTGGA	95	0.0012410438	13.631579	2
CCTGAGC	95	0.0012410438	13.631579	3
CAGCCAA	85	0.009381983	13.058823	9
GGTGTGA	100	0.0018265933	12.950001	25