ERR1629983_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1629983_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33634267
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC	153273	0.4557048916808563	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	104685	0.31124507633836646	No Hit
AGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGC	73765	0.21931502179012852	No Hit
CTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGCCC	59357	0.17647775704462357	No Hit
CTCACACCTGGTGGAAGCTCTCTACCTAGTGTGCGGGGAACGAGGCTTCTTCTACACACCCAAGACCCGCCGGG	42160	0.1253483538083348	No Hit
CCAACACCTGTGCGGCTCACACCTGGTGGAAGCTCTCTACCTAGTGTGCG	34850	0.10361456665608322	No Hit
GGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATGGC	34596	0.10285938444860417	No Hit
CTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTG	34228	0.10176526219524866	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTGAACG	13230	34.145573	7
TCGAACG	12970	33.932423	40
GTCGAAC	13030	33.823093	39
ACGGTAA	13045	33.70337	44
GAACGCT	13260	33.602703	9
AACGCTG	13280	33.580036	10
CGGTAAC	13545	32.541496	45
AACGGTA	14330	30.773006	43
AGTCGAA	14660	30.271929	38
GACAGGC	39825	30.108236	2
GCCTAAC	15195	29.571098	24
CGAACGG	15130	29.046242	41
GGCCTAA	15620	28.919945	23
GGACAGG	41450	28.747606	1
GAACGGT	15485	28.384449	42
CAAGTCG	15625	28.195333	36
AAGTCGA	16935	26.632298	37
TGAACGC	16885	26.613268	8
ACAGGCT	44595	26.6041	3
GTTTCGC	5960	24.777836	67