ERR1356966_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356966_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	103492
Sequences flagged as poor quality	0
Sequence length	75
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGA	678	0.655123101302516	No Hit
GAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCA	478	0.46187144900088895	No Hit
GCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACT	423	0.40872724461794147	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	286	0.2763498627913269	No Hit
CTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTG	246	0.23769953233100144	No Hit
CTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCA	245	0.23673327406949332	No Hit
GCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCT	202	0.19518416882464343	No Hit
TGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCAC	182	0.17585900359448073	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	179	0.17296022880995632	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG	170	0.1642639044563831	No Hit
GTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTG	153	0.1478375140107448	No Hit
CAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAG	122	0.11788350790399257	No Hit
TATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGG	108	0.10435589224287868	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCAC	20	0.0073080873	51.807384	50
GTAATCT	20	0.0073080873	51.807384	51
ACTCTTG	20	0.0073221	51.782307	6
GTCAGCG	70	7.2759576E-12	49.268787	43
GCTCGTC	70	7.2759576E-12	49.268787	39
GTCTACC	65	2.0736479E-10	47.8222	56
TGGTCGT	65	2.0736479E-10	47.8222	51
CGCCAGC	85	1.8189894E-12	44.631725	34
GTCGTCT	70	4.292815E-10	44.40633	53
ATCGTCA	70	4.3655746E-10	44.34191	10
CAATGCG	55	1.4564102E-7	43.894012	19
TCAGCGC	80	3.45608E-11	43.110188	44
ACTGTGC	90	1.8189894E-12	42.152187	8
TCTTGGA	75	8.58563E-10	41.385784	41
CATTGCG	85	6.548362E-11	40.574295	29
GTCGTCA	85	6.548362E-11	40.574295	24
GCTCGAT	85	6.548362E-11	40.574295	64
CGTCATT	85	6.548362E-11	40.574295	26
GAGTCCT	60	2.8841896E-7	40.23618	28
TGCGACG	60	2.8841896E-7	40.23618	22