ERR1356948_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356948_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1803592
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	4467	0.24767242258781366	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGC	3164	0.17542770205234887	No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACCGCCCTTAGACGTCTTGGTATACGGA	2265	0.12558272602672887	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGGCTAGACTAGCGTACGAGCACTATGG	2240	0.12419660322290184	No Hit
GTGTAGGACTCGTCGCATTGGATGACGATGCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCA	2199	0.12192336182462553	No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTTCCGCCCCTGGCGCTCTAGGCTA	2194	0.12164613726386013	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG	2088	0.11576897657563352	No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCT	2069	0.11471552324472498	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	2009	0.11138882851554009	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAATGCG	920	41.24849	19
ATCGTCA	945	39.789986	10
TGGTCGT	1010	37.92603	51
GAGTCCT	1015	37.04688	28
GCTCGAT	1110	35.124237	64
GTCATCC	1095	34.024265	13
GCTCGTC	1165	33.45023	39
GCGCTGG	1200	33.059456	47
GTCAGCG	1245	31.310371	43
TCAGCGC	1270	31.23728	44
GTCTACC	1250	30.920305	56
CGCCAGC	1290	30.749569	34
CTACACT	1225	30.413527	33
TGCGACG	1250	30.353836	22
TCATCCA	1230	30.291576	14
CGTCATT	1310	30.016806	26
GTCGTCT	1300	29.731064	53
GTACTAG	1370	29.483694	1
CTCGATA	1350	29.139544	65
GTCCTAC	1295	29.035936	30