ERR1356929_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356929_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1687978
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	3873	0.22944611837358073	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGC	2354	0.13945679386816653	No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTTCCGCCCCTGGCGCTCTAGGCTA	2177	0.1289708752128286	No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACCGCCCTTAGACGTCTTGGTATACGGA	2106	0.12476465925503769	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGGCTAGACTAGCGTACGAGCACTATGG	2094	0.12405374951569276	No Hit
GTGTAGGACTCGTCGCATTGGATGACGATGCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCA	1907	0.11297540607756736	No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCT	1790	0.10604403611895416	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTCA	840	0.0	37.373024	10
CAATGCG	835	0.0	36.76942	19
GAGTCCT	865	0.0	34.69862	28
CGACGAG	940	0.0	32.661232	24
GACTCAC	100	1.4460966E-8	31.06033	53
GTCATCC	1025	0.0	30.963299	13
AATGCGG	45	0.004624492	30.665049	27
GTCTATA	160	0.0	30.206503	1
TCATCCA	1090	0.0	29.435097	14
TCAAGAC	165	0.0	29.291153	3
CGACACT	120	2.6884663E-9	28.749332	14
GCATATA	205	0.0	28.627766	1
CATCGGT	85	4.4346507E-6	28.407738	25
GTCCTAC	1085	0.0	27.97843	30
CTACACT	1075	0.0	27.9178	33
TGCGACG	1115	0.0	27.844412	22
ATACATG	150	3.45608E-11	27.616552	5
CGAGGTT	50	0.0077480045	27.591179	36
ACCCTTG	370	0.0	27.038311	7
CCAATGC	1145	0.0	26.81438	18