ERR1356918_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356918_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1797423
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	4405	0.24507308518918475	No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACCGCCCTTAGACGTCTTGGTATACGGA	2733	0.15205101970988463	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGC	2493	0.1386985701195545	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGGCTAGACTAGCGTACGAGCACTATGG	2421	0.13469283524245546	No Hit
GTGTAGGACTCGTCGCATTGGATGACGATGCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCA	2340	0.130186383505719	No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTTCCGCCCCTGGCGCTCTAGGCTA	2055	0.11433034961720195	No Hit
GTTAATAATTCTGGCAATTCGTCTCCACACTAGAAGTCGACGAACAACGAAGAGCGACGATGCCCGTTTCAGGTG	1937	0.10776539523528965	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	1918	0.1067083263093885	No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAACCAGATGTGTG	1890	0.10515054052384998	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG	1880	0.10459418845758624	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCAAGAC	145	0.0	42.855305	3
ACGTATC	40	0.0025977034	34.49734	42
TCTCGGG	50	1.8651172E-4	34.489662	35
CAATGCG	705	0.0	33.762417	19
ATCGTCA	710	0.0	33.038788	10
GTCTGCA	75	1.6712947E-6	32.19662	11
GAGTCCT	720	0.0	32.102585	28
TGGTCGT	1135	0.0	31.928059	51
GCATATA	130	5.456968E-12	31.866766	1
TACACAG	55	3.2459444E-4	31.383062	5
TATCACG	55	3.26295E-4	31.35511	34
CGACGAG	750	0.0	31.275846	24
ATCGCTA	45	0.0046257493	30.66345	46
ACCCTTG	355	0.0	30.12276	7
GCTCGAT	1190	0.0	29.860706	64
GCGCTGG	1255	0.0	28.859907	47
GATATAC	120	2.6902853E-9	28.746183	63
CACTTTG	120	2.6902853E-9	28.746183	17
CGTTAAC	355	0.0	28.20134	1
GTCAGCG	1280	0.0	28.02753	43